Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 1.2e-56 223.0 120 100.0
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 1.5e-46 189.5 118 88.1
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 1.4e-41 172.9 118 81.4
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 6.1e-40 167.5 118 78.8
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 5.5e-33 144.4 119 68.1
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 7.2e-33 144.1 119 68.9
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 4.7e-32 141.4 106 74.5
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 8.0e-32 140.6 110 71.8
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 3.0e-31 138.7 122 68.0
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 1.1e-30 136.7 123 65.0
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 1.5e-30 136.3 125 64.0
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 2.6e-30 135.6 121 64.5
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 2.6e-30 135.6 113 68.1
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 3.3e-30 135.2 114 66.7
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 3.3e-30 135.2 117 64.1
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 7.4e-30 134.0 120 65.0
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 9.7e-30 133.7 120 60.0
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 1.3e-29 133.3 125 60.8
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 2.8e-29 132.1 118 65.3
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 4.8e-29 131.3 117 64.1
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 6.3e-29 131.0 122 63.1
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 6.3e-29 131.0 118 61.9
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 1.4e-28 129.8 104 69.2
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 1.4e-28 129.8 119 62.2
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 1.8e-28 129.4 120 65.0
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 1.8e-28 129.4 103 68.0
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 2.4e-28 129.0 120 63.3
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 3.1e-28 128.6 122 63.9
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 5.3e-28 127.9 119 61.3
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 5.3e-28 127.9 119 61.3
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 5.3e-28 127.9 122 62.3
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 7.0e-28 127.5 122 61.5
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 7.0e-28 127.5 120 62.5
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 9.1e-28 127.1 121 62.8
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 1.2e-27 126.7 120 60.0
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 3.5e-27 125.2 121 59.5
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 4.5e-27 124.8 104 67.3
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 4.5e-27 124.8 121 59.5
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 5.9e-27 124.4 118 61.0
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 1.0e-26 123.6 116 61.2
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.3e-26 123.2 118 59.3
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 1.7e-26 122.9 117 58.1
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.7e-26 122.9 118 59.3
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.2e-26 122.5 118 59.3
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 2.2e-26 122.5 105 61.0
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 2.9e-26 122.1 118 59.3
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 5.0e-26 121.3 115 62.6
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 5.0e-26 121.3 119 60.5
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 5.0e-26 121.3 119 62.2
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 6.5e-26 120.9 118 55.1
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 6.5e-26 120.9 118 60.2
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 1.1e-25 120.2 118 61.0
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 1.1e-25 120.2 121 60.3
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 1.9e-25 119.4 110 58.2
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.9e-25 119.4 117 60.7
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 2.5e-25 119.0 121 57.0
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 3.2e-25 118.6 101 67.3
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 3.2e-25 118.6 98 65.3
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 3.2e-25 118.6 114 58.8
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 4.2e-25 118.2 74 75.7
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 5.5e-25 117.9 122 56.6
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 7.2e-25 117.5 115 60.9
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 7.2e-25 117.5 115 60.9
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 9.4e-25 117.1 125 56.0
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 9.4e-25 117.1 112 55.4
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 9.4e-25 117.1 114 62.3
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 1.2e-24 116.7 119 57.1
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 1.2e-24 116.7 118 60.2
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 1.2e-24 116.7 122 60.7
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 2.1e-24 115.9 111 60.4
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 2.7e-24 115.5 104 59.6
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 4.7e-24 114.8 66 80.3
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 4.7e-24 114.8 121 56.2
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 1.0e-23 113.6 99 68.7
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 2.3e-23 112.5 121 58.7
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 4.0e-23 111.7 99 63.6
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 1.2e-22 110.2 101 61.4
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 1.5e-22 109.8 119 54.6
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 1.5e-22 109.8 104 62.5
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 3.7e-21 105.1 117 51.3
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 4.8e-21 104.8 115 53.0
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 8.3e-21 104.0 102 62.7
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 8.3e-21 104.0 85 65.9
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 1.4e-20 103.2 98 55.1
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 1.8e-20 102.8 121 53.7
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 1.8e-20 102.8 113 56.6
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 3.1e-20 102.1 67 74.6
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 4.1e-20 101.7 113 52.2
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 4.1e-20 101.7 98 54.1
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 5.3e-20 101.3 139 50.4
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 7.0e-20 100.9 78 67.9
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 7.0e-20 100.9 72 63.9
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 1.2e-19 100.1 113 51.3
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 1.2e-19 100.1 100 60.0
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.6e-19 99.8 97 58.8
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 2.7e-19 99.0 94 63.8
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 2.7e-19 99.0 103 59.2
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 2.7e-19 99.0 119 47.9
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 7.7e-19 97.4 122 52.5
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 2.9e-18 95.5 99 58.6
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 1.9e-17 92.8 118 43.2
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 3.2e-17 92.0 124 51.6
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 5.5e-17 91.3 119 52.1
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 1.2e-16 90.1 119 52.1
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 1.6e-16 89.7 108 50.9
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 1.0e-15 87.0 123 46.3
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 8.3e-13 77.4 117 47.9
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.1e-12 77.0 100 49.0
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 4.1e-12 75.1 118 42.4
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 4.5e-11 71.6 100 47.0
Sabra16G0109100 Salix brachista HOM05D007113 ORTHO05D008859 6.6e-10 67.8 110 50.0
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 1.2e-08 63.5 114 41.2
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 1.6e-08 63.2 119 42.9
SEGI_16463 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 6.1e-08 61.2 68 51.5
Peaxi162Scf01313g00026 Petunia axillaris HOM05D007113 ORTHO05D008859 7.5e-06 54.3 31 77.4


User provided reference genes

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