Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G3190 Erigeron canadensis HOM05D012511 ORTHO05D013076 4.8e-73 277.7 138 100.0
ECA232G1939 Erigeron canadensis HOM05D012511 ORTHO05D013076 9.8e-34 147.1 141 51.8
ECA238G2793 Erigeron canadensis HOM05D012511 ORTHO05D013076 1.0e-22 110.5 137 44.5
ECA240G2310 Erigeron canadensis HOM05D012511 ORTHO05D013076 1.3e-22 110.2 137 43.8
ECA238G3814 Erigeron canadensis HOM05D012511 ORTHO05D013076 2.9e-22 109.0 132 42.4
ECA240G1049 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-21 105.5 115 46.1
ECA234G0779 Erigeron canadensis HOM05D012511 ORTHO05D013076 7.3e-21 104.4 132 40.9
ECA238G1462 Erigeron canadensis HOM05D012511 ORTHO05D013076 8.0e-20 100.9 136 39.0
ECA248G3242 Erigeron canadensis HOM05D012511 ORTHO05D013076 9.8e-18 94.0 101 49.5
ECA246G3378 Erigeron canadensis HOM05D012511 ORTHO05D013076 3.2e-16 89.0 103 42.7
ECA236G3161 Erigeron canadensis HOM05D012511 ORTHO05D013076 5.4e-16 88.2 124 39.5
ECA233G5726 Erigeron canadensis HOM05D012511 ORTHO05D013076 8.1e-12 74.3 140 33.6
ECA236G1889 Erigeron canadensis HOM05D012511 ORTHO05D013076 8.1e-12 74.3 63 55.6
ECA234G0275 Erigeron canadensis HOM05D012511 ORTHO05D013076 4.0e-11 72.0 86 43.0
Lsat_1_v5_gn_1_123660 Lactuca sativa HOM05D009585 ORTHO05D000309 6.8e-11 71.2 137 36.5
Lsat_1_v5_gn_8_39100 Lactuca sativa HOM05D009585 ORTHO05D000309 6.8e-11 71.2 137 36.5
Lsat_1_v5_gn_8_440 Lactuca sativa HOM05D009585 ORTHO05D000309 6.8e-11 71.2 137 36.5
Lsat_1_v5_gn_8_86741 Lactuca sativa HOM05D009585 ORTHO05D000309 8.9e-11 70.9 83 43.4
Lsat_1_v5_gn_1_30700 Lactuca sativa HOM05D009585 ORTHO05D013076 1.5e-10 70.1 137 36.5
Lsat_1_v5_gn_5_164901 Lactuca sativa HOM05D009585 ORTHO05D000309 1.5e-10 70.1 137 36.5
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 7.5e-10 67.8 90 41.1
Lsat_1_v5_gn_4_135900 Lactuca sativa HOM05D009585 ORTHO05D000309 9.8e-10 67.4 124 33.1
Lsat_1_v5_gn_2_57141 Lactuca sativa HOM05D009585 ORTHO05D000309 1.7e-09 66.6 83 42.2
Lsat_1_v5_gn_3_24321 Lactuca sativa HOM05D009585 ORTHO05D000309 2.9e-09 65.9 83 41.0
Lsat_1_v5_gn_3_72860 Lactuca sativa HOM05D009585 ORTHO05D000309 1.1e-08 63.9 137 32.1
Lsat_1_v5_gn_6_56121 Lactuca sativa HOM05D009289 ORTHO05D000309 1.9e-08 63.2 62 45.2
Lsat_1_v5_gn_1_95961 Lactuca sativa HOM05D009585 ORTHO05D000309 7.1e-08 61.2 73 43.8
Lsat_1_v5_gn_4_160641 Lactuca sativa HOM05D009585 ORTHO05D000309 7.1e-08 61.2 73 43.8
Lsat_1_v5_gn_4_8221 Lactuca sativa HOM05D009289 ORTHO05D012683 7.1e-08 61.2 152 33.6
Lsat_1_v5_gn_2_100421 Lactuca sativa HOM05D009289 ORTHO05D012683 1.2e-07 60.5 152 33.6
Lsat_1_v5_gn_4_37440 Lactuca sativa HOM05D009289 ORTHO05D012683 1.6e-07 60.1 122 34.4
Lsat_1_v5_gn_7_91201 Lactuca sativa HOM05D009289 ORTHO05D012683 2.1e-07 59.7 127 33.9
Lj1P415T15 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-07 59.7 143 30.8
Lsat_1_v5_gn_1_26281 Lactuca sativa HOM05D009289 ORTHO05D012683 2.7e-07 59.3 126 31.0
Lsat_1_v5_gn_3_41700 Lactuca sativa HOM05D009289 ORTHO05D012683 2.7e-07 59.3 149 32.2
Lsat_1_v5_gn_9_115701 Lactuca sativa HOM05D009585 ORTHO05D000309 2.7e-07 59.3 93 32.3
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-07 59.3 58 46.6
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-07 59.3 58 46.6
SalBow1G4300 Salvia bowleyana HOM05D008808 ORTHO05D009453 2.7e-07 59.3 135 35.6
Migut.M00684 Erythranthe guttata HOM05D001383 ORTHO05D000309 3.5e-07 58.9 72 41.7
Lsat_1_v5_gn_4_114541 Lactuca sativa HOM05D009289 ORTHO05D012683 3.5e-07 58.9 121 34.7
Lsat_1_v5_gn_7_83420 Lactuca sativa HOM05D009289 ORTHO05D012683 3.5e-07 58.9 149 32.9
Lsat_1_v5_gn_2_16641 Lactuca sativa HOM05D009585 ORTHO05D000309 4.6e-07 58.5 69 40.6
Solyc12g150117.1 Solanum lycopersicum HOM05D004040 ORTHO05D000309 4.6e-07 58.5 60 45.0
Lsat_1_v5_gn_8_123281 Lactuca sativa HOM05D009585 ORTHO05D000309 6.0e-07 58.2 77 37.7
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.0e-06 57.4 90 35.6
ECA238G3980 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.3e-06 57.0 69 42.0
HanXRQChr04g0101711 Helianthus annuus HOM05D001383 ORTHO05D000309 1.3e-06 57.0 113 34.5
Lj1A225T5 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-06 57.0 58 46.6
Solyc05g017863.1 Solanum lycopersicum HOM05D004040 ORTHO05D000309 1.3e-06 57.0 81 37.0
ECA236G0124 Erigeron canadensis HOM05D001067 ORTHO05D000876 1.7e-06 56.6 82 37.8
Ah.03g139560 Amaranthus hybridus HOM05D008388 ORTHO05D000309 2.3e-06 56.2 136 30.9
ECA233G0345 Erigeron canadensis HOM05D022384 ORTHO05D013076 2.3e-06 56.2 77 44.2
Lsat_1_v5_gn_9_50460 Lactuca sativa HOM05D009289 ORTHO05D000309 2.3e-06 56.2 108 35.2
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 2.3e-06 56.2 58 44.8
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 2.3e-06 56.2 58 43.1
SGA_v2.0_scaffold1G00312 Striga asiatica HOM05D001383 ORTHO05D000309 2.3e-06 56.2 45 51.1
ECA232G1762 Erigeron canadensis HOM05D019205 ORTHO05D000476 3.0e-06 55.8 64 40.6
Lsat_1_v5_gn_4_83860 Lactuca sativa HOM05D009289 ORTHO05D012683 3.0e-06 55.8 138 28.3
Peaxi162Scf00171g00022 Petunia axillaris HOM05D001383 ORTHO05D000309 3.0e-06 55.8 56 50.0
Peaxi162Scf00225g00101 Petunia axillaris HOM05D001383 ORTHO05D000309 3.0e-06 55.8 56 50.0
Peaxi162Scf00699g00025 Petunia axillaris HOM05D001383 ORTHO05D000309 3.0e-06 55.8 56 50.0
Peaxi162Scf00990g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 3.0e-06 55.8 56 50.0
Peaxi162Scf01302g00024 Petunia axillaris HOM05D001383 ORTHO05D000309 3.0e-06 55.8 56 50.0
SGA_v2.0_scaffold309G48181 Striga asiatica HOM05D001383 ORTHO05D000309 3.0e-06 55.8 45 51.1
SGA_v2.0_scaffold55G19721 Striga asiatica HOM05D001383 ORTHO05D000309 3.0e-06 55.8 45 51.1
SGA_v2.0_scaffold5G03007 Striga asiatica HOM05D001383 ORTHO05D000309 3.0e-06 55.8 45 51.1
SGA_v2.0_scaffold88G27215 Striga asiatica HOM05D001383 ORTHO05D000309 3.0e-06 55.8 45 51.1
HanXRQChr02g0055571 Helianthus annuus HOM05D001383 ORTHO05D000309 3.9e-06 55.5 113 34.5
Lsat_1_v5_gn_6_181 Lactuca sativa HOM05D028082 ORTHO05D000309 3.9e-06 55.5 69 40.6
Lsat_1_v5_gn_7_5241 Lactuca sativa HOM05D009289 ORTHO05D012683 3.9e-06 55.5 136 28.7
Lj8P434T2 Lonicera japonica HOM05D008126 ORTHO05D000309 3.9e-06 55.5 138 31.9
Lsat_1_v5_gn_6_37980 Lactuca sativa HOM05D009289 ORTHO05D012683 5.1e-06 55.1 128 30.5
Lj3P53T19 Lonicera japonica HOM05D008126 ORTHO05D000309 5.1e-06 55.1 145 29.7
Peaxi162Scf00795g00012 Petunia axillaris HOM05D001383 ORTHO05D000309 5.1e-06 55.1 56 50.0
SalBow5G2011 Salvia bowleyana HOM05D008808 ORTHO05D009453 6.6e-06 54.7 73 43.8
Lj2P1210T23 Lonicera japonica HOM05D008126 ORTHO05D000309 8.6e-06 54.3 138 31.2
Lj3P1024T39 Lonicera japonica HOM05D008126 ORTHO05D000309 8.6e-06 54.3 101 30.7


User provided reference genes

Program Settings