Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 6.8e-139 497.3 242 100.0
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 4.4e-114 414.8 277 76.9
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 2.2e-113 412.5 271 78.2
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 5.4e-88 328.2 269 62.5
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 2.1e-87 326.2 256 64.5
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 1.9e-85 319.7 274 59.9
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 4.3e-85 318.5 273 61.2
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 4.3e-85 318.5 240 66.2
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 5.6e-85 318.2 236 65.3
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 7.3e-85 317.8 225 68.9
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 9.6e-85 317.4 255 63.5
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 9.6e-85 317.4 230 67.8
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 1.3e-84 317.0 263 60.8
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 1.6e-84 316.6 262 61.1
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 1.6e-84 316.6 277 58.8
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 2.1e-84 316.2 278 58.6
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.8e-84 315.8 225 67.6
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 2.8e-84 315.8 280 59.3
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 3.6e-84 315.5 246 63.8
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 3.6e-84 315.5 237 65.0
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 4.8e-84 315.1 268 60.8
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 6.2e-84 314.7 277 58.8
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 8.1e-84 314.3 283 58.7
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 8.1e-84 314.3 280 58.6
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 8.1e-84 314.3 277 59.6
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 1.1e-83 313.9 257 62.6
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 1.1e-83 313.9 226 66.8
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 1.8e-83 313.2 284 59.2
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 1.8e-83 313.2 227 67.8
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 1.8e-83 313.2 283 58.3
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 2.4e-83 312.8 267 59.9
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 3.1e-83 312.4 225 67.1
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 4.0e-83 312.0 226 66.8
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 5.3e-83 311.6 238 63.9
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 5.3e-83 311.6 243 64.2
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 5.3e-83 311.6 277 58.5
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 5.3e-83 311.6 266 59.8
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 6.9e-83 311.2 227 66.1
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 6.9e-83 311.2 246 63.4
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 6.9e-83 311.2 263 61.2
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 9.0e-83 310.8 244 62.7
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 9.0e-83 310.8 227 67.0
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 9.0e-83 310.8 283 58.3
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 9.0e-83 310.8 269 58.7
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 9.0e-83 310.8 267 59.2
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 9.0e-83 310.8 230 67.4
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 2.0e-82 309.7 267 58.1
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 4.4e-82 308.5 223 66.8
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 5.8e-82 308.1 231 64.9
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 7.6e-82 307.8 271 59.0
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 1.7e-81 306.6 267 57.7
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 1.7e-81 306.6 260 62.7
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 3.8e-81 305.4 253 59.7
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 3.8e-81 305.4 228 65.4
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 6.4e-81 304.7 222 67.1
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 6.4e-81 304.7 259 60.2
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 1.1e-80 303.9 268 59.7
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 1.9e-80 303.1 260 60.8
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 2.4e-80 302.8 258 62.4
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 3.2e-80 302.4 254 57.5
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 5.4e-80 301.6 221 66.5
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 5.4e-80 301.6 252 59.1
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 5.4e-80 301.6 251 60.2
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 7.1e-80 301.2 235 63.4
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 1.6e-79 300.1 231 63.6
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 1.6e-79 300.1 250 60.4
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 2.7e-79 299.3 221 65.6
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 2.7e-79 299.3 268 56.7
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 2.7e-79 299.3 248 58.1
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 3.5e-79 298.9 233 65.2
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 3.5e-79 298.9 248 61.7
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 6.0e-79 298.1 241 61.8
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 1.0e-78 297.4 221 63.8
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 1.7e-78 296.6 222 65.3
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 3.9e-78 295.4 239 62.3
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 8.7e-78 294.3 249 58.6
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 8.7e-78 294.3 228 63.2
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 1.5e-77 293.5 272 55.9
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 1.5e-77 293.5 239 61.5
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 1.9e-77 293.1 260 56.9
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 7.3e-77 291.2 241 60.6
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 3.6e-76 288.9 277 56.0
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 3.6e-76 288.9 226 64.6
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 4.8e-76 288.5 222 63.5
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 1.1e-75 287.3 242 59.9
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 1.1e-75 287.3 291 52.6
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 1.8e-75 286.6 229 62.4
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 3.1e-75 285.8 229 60.7
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 9.0e-75 284.3 266 56.4
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 2.2e-73 279.6 285 53.0
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 2.9e-73 279.3 162 79.6
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 4.9e-73 278.5 285 52.6
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 1.1e-72 277.3 258 57.0
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 6.0e-71 271.6 227 59.5
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 3.9e-70 268.9 158 77.8
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 8.7e-70 267.7 223 61.9
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 3.3e-69 265.8 244 56.1
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 1.8e-67 260.0 251 57.4
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 5.3e-67 258.5 160 73.8
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 2.0e-66 256.5 207 61.4
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 1.3e-65 253.8 232 54.3
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 6.5e-65 251.5 261 52.1
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 8.4e-65 251.1 158 73.4
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 4.2e-64 248.8 265 52.5
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 3.9e-62 242.3 233 54.9
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 3.9e-62 242.3 241 50.2
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 5.1e-62 241.9 258 50.4
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 1.9e-61 240.0 258 50.0
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 1.3e-60 237.3 226 51.3
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 1.3e-60 237.3 244 53.3
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 4.5e-58 228.8 158 67.7
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 7.6e-58 228.0 239 50.6
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 6.5e-57 224.9 272 45.2
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 3.5e-55 219.2 229 51.1
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 5.7e-53 211.8 214 50.0
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 2.8e-52 209.5 212 58.0
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 1.3e-49 200.7 167 62.9
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 2.2e-36 156.8 232 39.7
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 8.2e-36 154.8 200 44.5
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 3.5e-34 149.4 131 56.5
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 1.3e-33 147.5 197 45.2
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 5.0e-33 145.6 172 50.6
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 1.9e-32 143.7 136 50.7
Solyc04g025230.1 Solanum lycopersicum HOM05D002510 ORTHO05D006928 2.1e-31 140.2 91 70.3
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 2.7e-31 139.8 180 47.8
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 4.1e-27 125.9 150 45.3
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 2.0e-26 123.6 156 43.6
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 3.8e-25 119.4 133 50.4
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 1.9e-24 117.1 102 60.8
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 1.8e-22 110.5 165 43.0
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 1.4e-19 100.9 110 52.7
Actinidia32448 Actinidia chinensis HOM05D002510 ORTHO05D006928 2.7e-18 96.7 80 57.5
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 2.0e-13 80.5 131 34.4
PRCOL_00005349 Prasinoderma coloniale HOM05D002510 ORTHO05D006928 6.3e-12 75.5 77 51.9
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.4e-11 73.6 125 36.8
A03p21800 Brassica napus HOM05D002510 ORTHO05D006928 9.2e-11 71.6 76 47.4
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 3.5e-10 69.7 61 54.1
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 9.5e-08 61.6 84 38.1
Actinidia37356 Actinidia chinensis HOM05D002510 ORTHO05D006928 5.2e-06 55.8 54 51.9


User provided reference genes

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