Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 4.4e-65 251.1 127 100.0
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 3.8e-56 221.5 124 89.5
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 1.6e-54 216.1 124 87.1
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 2.7e-46 188.7 121 79.3
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 2.7e-46 188.7 119 79.8
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 7.8e-46 187.2 124 75.8
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 7.8e-46 187.2 123 76.4
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 2.3e-45 185.7 123 75.6
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 2.3e-45 185.7 123 76.4
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 2.3e-45 185.7 123 76.4
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 2.3e-45 185.7 123 77.2
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 3.9e-45 184.9 127 72.4
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 5.1e-45 184.5 119 78.2
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 6.6e-45 184.1 120 77.5
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 1.1e-44 183.3 121 76.0
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 3.3e-44 181.8 123 75.6
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 3.3e-44 181.8 121 75.2
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 3.3e-44 181.8 121 75.2
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 3.3e-44 181.8 124 72.6
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 4.3e-44 181.4 127 71.7
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 4.3e-44 181.4 127 70.9
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 5.6e-44 181.0 123 72.4
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 5.6e-44 181.0 123 72.4
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 7.3e-44 180.6 123 72.4
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 9.6e-44 180.3 122 75.4
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 9.6e-44 180.3 123 73.2
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 1.6e-43 179.5 123 73.2
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 4.8e-43 177.9 124 73.4
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 4.8e-43 177.9 124 73.4
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 4.8e-43 177.9 123 72.4
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 6.2e-43 177.6 123 72.4
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 6.2e-43 177.6 124 71.0
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 8.1e-43 177.2 118 74.6
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.1e-42 176.8 119 74.8
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 1.4e-42 176.4 124 71.0
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 2.4e-42 175.6 123 73.2
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 4.0e-42 174.9 120 74.2
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 4.0e-42 174.9 122 70.5
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 4.0e-42 174.9 123 70.7
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 5.3e-42 174.5 123 72.4
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 6.9e-42 174.1 126 67.5
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 6.9e-42 174.1 127 67.7
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 9.0e-42 173.7 123 71.5
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 9.0e-42 173.7 124 71.8
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 1.2e-41 173.3 124 68.5
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 1.2e-41 173.3 124 73.4
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 1.2e-41 173.3 128 71.1
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 1.2e-41 173.3 124 70.2
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 1.5e-41 172.9 120 72.5
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 1.5e-41 172.9 127 70.1
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 2.0e-41 172.6 118 73.7
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 4.5e-41 171.4 124 70.2
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 4.5e-41 171.4 118 73.7
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 5.8e-41 171.0 124 70.2
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 5.8e-41 171.0 124 70.2
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 5.8e-41 171.0 124 70.2
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 7.6e-41 170.6 124 70.2
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 9.9e-41 170.2 118 74.6
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 1.7e-40 169.5 123 69.1
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 1.7e-40 169.5 119 72.3
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 2.2e-40 169.1 124 69.4
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 2.2e-40 169.1 124 67.7
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 2.2e-40 169.1 123 67.5
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 2.9e-40 168.7 118 73.7
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 2.9e-40 168.7 118 73.7
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 2.9e-40 168.7 124 69.4
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 3.8e-40 168.3 124 69.4
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 3.8e-40 168.3 124 69.4
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 3.8e-40 168.3 124 69.4
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 3.8e-40 168.3 124 69.4
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 3.8e-40 168.3 124 66.9
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 3.8e-40 168.3 117 71.8
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 4.9e-40 167.9 124 68.5
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 4.9e-40 167.9 124 67.7
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 8.4e-40 167.2 124 69.4
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 1.1e-39 166.8 118 68.6
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 1.1e-39 166.8 117 70.9
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 1.1e-39 166.8 123 71.5
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.4e-39 166.4 102 77.5
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 1.4e-39 166.4 123 65.9
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 2.4e-39 165.6 123 65.0
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 3.2e-39 165.2 124 70.2
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 5.4e-39 164.5 103 76.7
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 2.1e-38 162.5 136 64.7
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 2.1e-38 162.5 120 65.8
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 3.5e-38 161.8 119 66.4
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 1.0e-37 160.2 119 69.7
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 1.3e-37 159.8 119 68.1
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 3.0e-37 158.7 104 76.0
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 6.7e-37 157.5 146 57.5
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 1.1e-36 156.8 113 71.7
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 1.5e-36 156.4 127 60.6
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 1.9e-36 156.0 127 66.1
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 1.6e-35 152.9 144 56.9
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 1.6e-35 152.9 103 71.8
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 2.1e-35 152.5 120 60.0
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 2.8e-35 152.1 117 65.0
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 3.7e-35 151.8 135 62.2
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 3.7e-35 151.8 119 65.5
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 1.2e-33 146.7 111 66.7
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 2.6e-33 145.6 132 53.0
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 9.9e-33 143.7 102 71.6
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 3.8e-32 141.7 101 70.3
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 6.4e-32 141.0 99 69.7
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 8.4e-32 140.6 102 70.6
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 1.4e-31 139.8 124 58.9
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 1.9e-31 139.4 130 56.9
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 2.4e-31 139.0 88 76.1
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 5.5e-31 137.9 216 41.2
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 6.0e-30 134.4 132 56.1
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 1.3e-29 133.3 117 62.4
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 1.3e-27 126.7 105 60.0
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 2.1e-27 125.9 81 75.3
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 8.2e-27 124.0 103 62.1
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 5.8e-25 117.9 77 74.0
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 6.5e-24 114.4 88 67.0
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 4.6e-22 108.2 126 45.2
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 6.7e-21 104.4 66 75.8
MELO3C033557.2 Cucumis melo HOM05D006084 ORTHO05D007449 1.3e-19 100.1 95 56.8
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 4.8e-19 98.2 72 66.7
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 1.8e-18 96.3 121 39.7
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 5.3e-18 94.7 73 60.3
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 4.5e-17 91.7 86 50.0
BraA10t44460Z Brassica rapa HOM05D006084 ORTHO05D007449 7.6e-17 90.9 85 60.0
Os01g0339600 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 1.0e-16 90.5 66 66.7
arahy.Tifrunner.gnm1.ann1.2H702Y Arachis hypogaea HOM05D006084 ORTHO05D007449 2.3e-13 79.3 57 70.2
A10p23960 Brassica napus HOM05D006084 ORTHO05D007449 6.5e-08 61.2 129 37.2
MCO07G269 Micromonas commoda HOM05D006084 ORTHO05D007449 1.4e-07 60.1 103 33.0
Dinv35076 Davidia involucrata HOM05D006084 ORTHO05D007449 2.1e-06 56.2 45 60.0
SEGI_25092 Sequoiadendron giganteum HOM05D006084 ORTHO05D007449 2.1e-06 56.2 46 54.3


User provided reference genes

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