Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 3.0e-64 248.4 133 100.0
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 2.6e-52 208.8 133 83.5
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 2.2e-38 162.5 123 73.2
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 9.1e-37 157.1 132 67.4
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 7.7e-36 154.1 132 65.9
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 3.8e-35 151.8 128 66.4
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 4.7e-33 144.8 133 64.7
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 1.8e-32 142.9 132 60.6
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 1.5e-31 139.8 130 63.1
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 1.5e-31 139.8 132 59.8
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 3.4e-31 138.7 130 62.3
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 5.7e-31 137.9 129 57.4
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 9.7e-31 137.1 130 62.3
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 9.7e-31 137.1 130 62.3
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 9.7e-31 137.1 114 63.2
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 8.3e-30 134.0 133 57.9
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 1.1e-29 133.7 129 57.4
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 3.1e-29 132.1 132 56.8
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 9.1e-29 130.6 108 63.0
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 1.2e-28 130.2 132 57.6
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 5.9e-28 127.9 131 59.5
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 5.9e-28 127.9 131 59.5
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 5.9e-28 127.9 132 56.1
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 7.7e-28 127.5 124 57.3
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 7.7e-28 127.5 127 59.8
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.2e-27 125.9 114 57.9
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.9e-27 125.6 132 55.3
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.9e-27 125.6 132 56.1
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 3.8e-27 125.2 133 54.1
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 3.8e-27 125.2 133 55.6
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 5.0e-27 124.8 135 56.3
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 6.5e-27 124.4 123 57.7
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 6.5e-27 124.4 129 58.9
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 8.5e-27 124.0 130 56.2
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 1.1e-26 123.6 132 56.1
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 1.5e-26 123.2 124 58.1
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 2.5e-26 122.5 130 57.7
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 3.2e-26 122.1 118 55.1
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 3.2e-26 122.1 118 55.1
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 3.2e-26 122.1 123 57.7
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 3.2e-26 122.1 136 54.4
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 5.5e-26 121.3 131 55.7
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 9.4e-26 120.6 133 54.9
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 9.4e-26 120.6 118 55.1
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 9.4e-26 120.6 101 61.4
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.2e-25 120.2 131 57.3
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 1.2e-25 120.2 130 53.1
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 1.2e-25 120.2 132 54.5
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 2.1e-25 119.4 126 53.2
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 2.1e-25 119.4 123 57.7
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 2.7e-25 119.0 131 53.4
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 3.6e-25 118.6 134 52.2
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 3.6e-25 118.6 122 55.7
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 3.6e-25 118.6 131 51.1
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 4.7e-25 118.2 132 53.0
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 4.7e-25 118.2 132 53.0
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 6.1e-25 117.9 126 53.2
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 6.1e-25 117.9 132 53.0
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 6.1e-25 117.9 111 54.1
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 6.1e-25 117.9 111 54.1
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 6.1e-25 117.9 108 60.2
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 8.0e-25 117.5 118 56.8
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 1.0e-24 117.1 132 50.8
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 1.0e-24 117.1 124 56.5
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 1.0e-24 117.1 132 53.8
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 1.4e-24 116.7 123 56.1
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 1.8e-24 116.3 108 57.4
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 1.8e-24 116.3 128 53.9
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 1.8e-24 116.3 132 52.3
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 2.3e-24 115.9 122 53.3
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 2.3e-24 115.9 122 53.3
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 2.3e-24 115.9 125 54.4
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 3.0e-24 115.5 108 59.3
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 3.0e-24 115.5 131 54.2
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 4.0e-24 115.2 122 53.3
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 4.0e-24 115.2 122 53.3
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 4.0e-24 115.2 122 53.3
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 4.0e-24 115.2 129 58.1
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 5.2e-24 114.8 134 54.5
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 5.2e-24 114.8 130 52.3
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 6.8e-24 114.4 127 53.5
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 6.8e-24 114.4 127 53.5
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 1.5e-23 113.2 111 55.0
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.5e-23 113.2 139 51.8
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 2.0e-23 112.8 131 51.1
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 2.0e-23 112.8 128 55.5
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 2.0e-23 112.8 108 61.1
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 5.7e-23 111.3 127 54.3
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 5.7e-23 111.3 132 50.0
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 5.7e-23 111.3 132 51.5
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 7.5e-23 110.9 121 50.4
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 9.8e-23 110.5 121 53.7
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 1.7e-22 109.8 121 50.4
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 1.7e-22 109.8 132 48.5
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 1.7e-22 109.8 132 54.5
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 1.7e-22 109.8 128 52.3
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 3.7e-22 108.6 111 51.4
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 4.8e-22 108.2 129 49.6
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 4.8e-22 108.2 127 52.8
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 6.3e-22 107.8 97 57.7
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 1.8e-21 106.3 114 50.0
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 2.4e-21 105.9 101 58.4
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 5.4e-21 104.8 135 48.1
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 9.1e-21 104.0 107 53.3
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 4.5e-20 101.7 131 48.9
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 7.7e-20 100.9 130 50.8
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 1.0e-19 100.5 106 50.9
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.7e-19 99.8 71 70.4
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 2.9e-19 99.0 129 48.8
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 8.6e-19 97.4 122 47.5
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 8.6e-19 97.4 113 48.7
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 3.3e-18 95.5 110 52.7
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 7.2e-18 94.4 130 47.7
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 1.6e-17 93.2 139 46.0
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 1.0e-16 90.5 88 51.1
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 1.0e-16 90.5 83 55.4
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 5.2e-16 88.2 88 62.5
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 7.5e-15 84.3 117 43.6
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 4.9e-14 81.6 64 62.5
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 2.4e-13 79.3 87 44.8
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 4.1e-13 78.6 64 64.1
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 1.6e-12 76.6 87 46.0
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 1.0e-11 73.9 108 42.6
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 2.3e-11 72.8 89 53.9
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 5.2e-08 61.6 134 32.8
ECA240G1548 Erigeron canadensis HOM05D006057 ORTHO05D007224 3.7e-06 55.5 27 100.0


User provided reference genes

Program Settings