Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G2945 Erigeron canadensis HOM05D001176 ORTHO05D187445 3.5e-55 218.0 106 100.0
Ca_24495_v3 Cicer arietinum L. HOM05D001176 ORTHO05D008595 1.3e-14 83.2 66 65.2
MELO3C016233.2 Cucumis melo HOM05D001176 ORTHO05D008595 1.3e-14 83.2 66 65.2
Eucgr.A00911 Eucalyptus grandis HOM05D001176 ORTHO05D008595 1.3e-14 83.2 66 65.2
Medtr5g009110 Medicago truncatula HOM05D001176 ORTHO05D008595 1.3e-14 83.2 66 65.2
TPR.G38037 Trifolium pratense HOM05D001176 ORTHO05D008595 1.3e-14 83.2 66 65.2
BcaC07g37875 Brassica carinata HOM05D001176 ORTHO05D008595 2.3e-14 82.4 66 63.6
A08p11660 Brassica napus HOM05D001176 ORTHO05D008595 2.3e-14 82.4 66 63.6
ECA248G2999 Erigeron canadensis HOM05D001176 ORTHO05D008595 2.3e-14 82.4 66 65.2
Actinidia12511 Actinidia chinensis HOM05D001176 ORTHO05D008595 3.9e-14 81.6 66 63.6
BcaB04g18283 Brassica carinata HOM05D001176 ORTHO05D008595 3.9e-14 81.6 66 62.1
CANSAT64G1576 Cannabis sativa HOM05D001176 ORTHO05D008595 3.9e-14 81.6 66 63.6
CiPaw.04G072600 Carya illinoinensis HOM05D001176 ORTHO05D008595 3.9e-14 81.6 66 63.6
Ciclev10011353m.g Citrus clementina HOM05D001176 ORTHO05D008595 3.9e-14 81.6 66 63.6
DCAR_013342 Daucus carota HOM05D001176 ORTHO05D008595 3.9e-14 81.6 84 54.8
Migut.M00093 Erythranthe guttata HOM05D001176 ORTHO05D008595 3.9e-14 81.6 66 63.6
Lsat_1_v5_gn_1_58321 Lactuca sativa HOM05D001176 ORTHO05D008595 3.9e-14 81.6 66 65.2
Lalb_Chr05g0211481 Lupinus albus HOM05D001176 ORTHO05D008595 3.9e-14 81.6 66 63.6
Nn7g38268 Nelumbo nucifera HOM05D001176 ORTHO05D008595 3.9e-14 81.6 66 63.6
PSO541G0961 Papaver somniferum HOM05D001176 ORTHO05D008595 3.9e-14 81.6 66 65.2
PSO675G4847 Papaver somniferum HOM05D001176 ORTHO05D008595 3.9e-14 81.6 66 65.2
Phvul.002G165400 Phaseolus vulgaris HOM05D001176 ORTHO05D008595 3.9e-14 81.6 66 62.1
QL04p062166 Quercus lobata HOM05D001176 ORTHO05D008595 3.9e-14 81.6 66 63.6
Thecc.01G173300 Theobroma cacao HOM05D001176 ORTHO05D008595 3.9e-14 81.6 66 63.6
vmacro08759 Vaccinium macrocarpon HOM05D001176 ORTHO05D008595 3.9e-14 81.6 66 63.6
GSVIVG01015850001 Vitis vinifera HOM05D001176 ORTHO05D008595 3.9e-14 81.6 66 63.6
Aqoxy2G00588 Aquilegia oxysepala HOM05D001176 ORTHO05D008595 5.1e-14 81.3 66 62.1
CARHR221850 Cardamine hirsuta HOM05D001176 ORTHO05D008595 5.1e-14 81.3 66 62.1
HanXRQChr01g0025791 Helianthus annuus HOM05D001176 ORTHO05D008595 5.1e-14 81.3 66 63.6
RcHm_v2.0_Chr2g0153541 Rosa chinensis HOM05D001176 ORTHO05D008595 5.1e-14 81.3 66 63.6
CAN.G1272.1 Capsicum annuum HOM05D001176 ORTHO05D008595 6.6e-14 80.9 66 63.6
ClCG07G010970 Citrullus lanatus HOM05D001176 ORTHO05D008595 6.6e-14 80.9 55 74.5
CsaV3_4G007300 Cucumis sativus L. HOM05D001176 ORTHO05D008595 6.6e-14 80.9 55 74.5
Gohir.A07G184400 Gossypium hirsutum HOM05D001176 ORTHO05D008595 6.6e-14 80.9 66 62.1
Gohir.D07G191200 Gossypium hirsutum HOM05D001176 ORTHO05D008595 6.6e-14 80.9 66 62.1
Gorai.001G213800 Gossypium raimondii HOM05D001176 ORTHO05D008595 6.6e-14 80.9 66 62.1
MD17G1129200 Malus domestica HOM05D001176 ORTHO05D008595 6.6e-14 80.9 66 63.6
Peaxi162Scf00322g00310 Petunia axillaris HOM05D001176 ORTHO05D008595 6.6e-14 80.9 66 63.6
Sabra06G0005000 Salix brachista HOM05D001176 ORTHO05D008595 6.6e-14 80.9 55 74.5
Sc03g0005510 Simmondsia chinensis HOM05D001176 ORTHO05D008595 6.6e-14 80.9 66 63.6
AL7G40600 Arabidopsis lyrata HOM05D001176 ORTHO05D008595 8.6e-14 80.5 52 76.9
AT4G15110 Arabidopsis thaliana HOM05D001176 ORTHO05D008595 8.6e-14 80.5 52 76.9
arahy.Tifrunner.gnm1.ann1.M1JRW6 Arachis hypogaea HOM05D001176 ORTHO05D008595 8.6e-14 80.5 66 62.1
arahy.Tifrunner.gnm1.ann1.NAXY0P Arachis hypogaea HOM05D001176 ORTHO05D008595 8.6e-14 80.5 66 62.1
CDE06G1242 Ceratophyllum demersum HOM05D001176 ORTHO05D008595 8.6e-14 80.5 66 62.1
Psat2g186080 Pisum sativum HOM05D001176 ORTHO05D008595 8.6e-14 80.5 52 78.8
FvH4_6g39510 Fragaria vesca HOM05D001176 ORTHO05D008595 1.1e-13 80.1 66 62.1
FAN02G3300 Fragaria x ananassa HOM05D001176 ORTHO05D008595 1.1e-13 80.1 66 62.1
FAN14G2976 Fragaria x ananassa HOM05D001176 ORTHO05D008595 1.1e-13 80.1 66 62.1
SGA_v2.0_scaffold73G24426 Striga asiatica HOM05D001176 ORTHO05D008595 1.1e-13 80.1 66 62.1
THA.LOC104808510 Tarenaya hassleriana HOM05D001176 ORTHO05D008595 1.1e-13 80.1 66 62.1
Cpa.g.sc8.285 Carica papaya HOM05D001176 ORTHO05D008595 1.5e-13 79.7 66 62.1
Thhalv10024764m.g Eutrema salsugineum HOM05D001176 ORTHO05D008595 1.5e-13 79.7 66 60.6
Nitab4.5_0000019g0160 Nicotiana tabacum HOM05D001176 ORTHO05D008595 1.5e-13 79.7 52 78.8
Nitab4.5_0003650g0010 Nicotiana tabacum HOM05D001176 ORTHO05D008595 1.5e-13 79.7 52 78.8
Sp7g13340 Schrenkiella parvula HOM05D001176 ORTHO05D008595 1.5e-13 79.7 52 76.9
Solyc05g016330.3 Solanum lycopersicum HOM05D001176 ORTHO05D008595 1.5e-13 79.7 52 78.8
Sopen05g013460 Solanum pennellii HOM05D001176 ORTHO05D008595 1.5e-13 79.7 52 78.8
PGSC0003DMG400024342 Solanum tuberosum HOM05D001176 ORTHO05D008595 1.5e-13 79.7 52 78.8
Zm00001eb207080 Zea mays HOM05D001176 ORTHO05D008595 1.5e-13 79.7 66 62.1
EL10Ac6g15342 Beta vulgaris HOM05D001176 ORTHO05D008595 1.9e-13 79.3 55 70.9
CSS0022319 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D008595 1.9e-13 79.3 55 72.7
CSS0028297 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D008595 1.9e-13 79.3 55 72.7
Cfa022496 Carpinus fangiana HOM05D001176 ORTHO05D008595 1.9e-13 79.3 55 72.7
Haze_13645 Corylus avellana HOM05D001176 ORTHO05D008595 1.9e-13 79.3 55 72.7
Glyma.11G016200 Glycine max HOM05D001176 ORTHO05D008595 1.9e-13 79.3 55 72.7
Lj1A1044G23 Lonicera japonica HOM05D001176 ORTHO05D008595 1.9e-13 79.3 66 62.1
Potri.006G006200 Populus trichocarpa HOM05D001176 ORTHO05D008595 1.9e-13 79.3 55 72.7
Prupe.3G185900 Prunus persica HOM05D001176 ORTHO05D008595 1.9e-13 79.3 66 62.1
Sed0015103 Sechium edule HOM05D001176 ORTHO05D008595 1.9e-13 79.3 55 72.7
Carub.0007s2688 Capsella rubella HOM05D001176 ORTHO05D008595 2.5e-13 79.0 52 75.0
FAN09G2605 Fragaria x ananassa HOM05D001176 ORTHO05D008595 2.5e-13 79.0 64 64.1
Oeu012378.4 Olea europaea HOM05D001176 ORTHO05D008595 2.5e-13 79.0 70 57.1
TWI32G0878 Tripterygium wilfordii HOM05D001176 ORTHO05D008595 2.5e-13 79.0 66 62.1
VMungo1215G2273 Vigna mungo HOM05D001176 ORTHO05D008595 2.5e-13 79.0 55 70.9
Aa31LG9G2280 Aethionema arabicum HOM05D001176 ORTHO05D008595 3.3e-13 78.6 55 70.9
PGR031G0231 Punica granatum HOM05D001176 ORTHO05D008595 3.3e-13 78.6 66 62.1
Atru.chr8.1001 Acer truncatum HOM05D001176 ORTHO05D008595 4.3e-13 78.2 66 60.6
Duzib138G1658 Durio zibethinus HOM05D001176 ORTHO05D008595 4.3e-13 78.2 66 60.6
TAR626G0594 Trochodendron aralioides HOM05D001176 ORTHO05D008595 4.3e-13 78.2 66 62.1
AUR62003539 Chenopodium quinoa HOM05D001176 ORTHO05D008595 5.6e-13 77.8 66 57.6
AUR62015178 Chenopodium quinoa HOM05D006931 ORTHO05D008782 5.6e-13 77.8 66 57.6
Cc05_g00020 Coffea canephora HOM05D001176 ORTHO05D008595 5.6e-13 77.8 66 62.1
Glyma.01G226502 Glycine max HOM05D001176 ORTHO05D008595 5.6e-13 77.8 55 70.9
LjContig00222g0002891 Lotus japonicus HOM05D001176 ORTHO05D008595 5.6e-13 77.8 55 70.9
MSTRG.6599 Avicennia marina HOM05D001176 ORTHO05D008595 7.3e-13 77.4 66 60.6
FAN05G2373 Fragaria x ananassa HOM05D001176 ORTHO05D008595 7.3e-13 77.4 55 70.9
Manes.09G079657 Manihot esculenta HOM05D001176 ORTHO05D008595 7.3e-13 77.4 66 57.6
Rhsim12G0014900 Rhododendron simsii HOM05D001176 ORTHO05D008595 7.3e-13 77.4 66 60.6
SalBow7G2432 Salvia bowleyana HOM05D001176 ORTHO05D008595 1.2e-12 76.6 55 69.1
HPP92_004191 Vanilla planifolia HOM05D001176 ORTHO05D008595 1.6e-12 76.3 55 70.9
AUR62017853 Chenopodium quinoa HOM05D001176 ORTHO05D008595 2.8e-12 75.5 66 56.1
ATR0815G009 Amborella trichopoda HOM05D001176 ORTHO05D008595 4.7e-12 74.7 55 69.1
Dinv44680 Davidia involucrata HOM05D001176 ORTHO05D008595 4.7e-12 74.7 55 69.1
BolC8t48268H Brassica oleracea HOM05D001176 ORTHO05D008595 6.2e-12 74.3 71 57.7
AagrBONN_evm.TU.Sc2ySwM_117.2648 Anthoceros agrestis HOM05D001176 ORTHO05D008595 1.4e-11 73.2 52 71.2
SMO119G0427 Selaginella moellendorffii HOM05D001176 ORTHO05D008595 2.3e-11 72.4 52 69.2
ATR0772G108 Amborella trichopoda HOM05D001176 ORTHO05D008595 3.1e-11 72.0 68 54.4
Mapoly0245s0001 Marchantia polymorpha HOM05D001176 ORTHO05D008595 2.0e-10 69.3 65 55.4
PRCOL_00007072 Prasinoderma coloniale HOM05D001176 ORTHO05D008595 9.9e-10 67.0 66 53.0
Pp3c4_28160 Physcomitrium patens HOM05D001176 ORTHO05D008595 1.7e-09 66.2 53 64.2
CBR_g55238 Chara braunii HOM05D001176 ORTHO05D008595 4.9e-09 64.7 52 61.5
MCO06G124 Micromonas commoda HOM05D001176 ORTHO05D008595 4.9e-09 64.7 45 73.3
Cre01.g027550 Chlamydomonas reinhardtii HOM05D001176 ORTHO05D008595 6.4e-09 64.3 51 66.7
PRCOL_00005745 Prasinoderma coloniale HOM05D001176 ORTHO05D008595 6.4e-09 64.3 55 60.0
PRCOL_00001498 Prasinoderma coloniale HOM05D001176 ORTHO05D008595 1.1e-08 63.5 55 63.6
MCO06G252 Micromonas commoda HOM05D001176 ORTHO05D008595 2.4e-08 62.4 52 63.5
AUR62014932 Chenopodium quinoa HOM05D001176 ORTHO05D008595 2.1e-07 59.3 55 50.9
PSO017G2236 Papaver somniferum HOM05D001176 ORTHO05D003317 1.0e-06 57.0 66 47.0
Prupe.6G358000 Prunus persica HOM05D001176 ORTHO05D003317 1.3e-06 56.6 70 45.7
MD12G1257000 Malus domestica HOM05D001176 ORTHO05D003317 3.0e-06 55.5 66 47.0
PSO063G1081 Papaver somniferum HOM05D001176 ORTHO05D003317 3.0e-06 55.5 66 45.5
PRCOL_00004323 Prasinoderma coloniale HOM05D001176 ORTHO05D008595 5.1e-06 54.7 46 58.7
TWI59G0800 Tripterygium wilfordii HOM05D001176 ORTHO05D003317 5.1e-06 54.7 66 45.5
GSVIVG01019158001 Vitis vinifera HOM05D001176 ORTHO05D003317 6.6e-06 54.3 66 45.5
Duzib128G0007 Durio zibethinus HOM05D001176 ORTHO05D003317 8.6e-06 53.9 66 45.5
Lalb_Chr03g0038311 Lupinus albus HOM05D001176 ORTHO05D003317 8.6e-06 53.9 66 47.0
MBI10_g09189_MAGBIO Magnolia biondii HOM05D001176 ORTHO05D003317 8.6e-06 53.9 66 45.5
SMO351G0009 Selaginella moellendorffii HOM05D001176 ORTHO05D003317 8.6e-06 53.9 70 41.4


User provided reference genes

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