Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G2925 Erigeron canadensis HOM05D004973 ORTHO05D006119 4.0e-135 485.0 276 100.0
HanXRQChr07g0195961 Helianthus annuus HOM05D004973 ORTHO05D006119 4.3e-65 252.3 298 57.4
Lsat_1_v5_gn_2_110141 Lactuca sativa HOM05D004973 ORTHO05D006119 1.4e-63 247.3 292 59.2
HanXRQChr14g0453421 Helianthus annuus HOM05D004973 ORTHO05D006119 4.8e-56 222.2 276 53.3
Dinv37236 Davidia involucrata HOM05D004973 ORTHO05D006119 1.8e-31 140.6 295 38.0
Hma1.2p1_0111F.1_g053560 Hydrangea macrophylla HOM05D004973 ORTHO05D006119 5.9e-30 135.6 285 37.5
PGSC0003DMG400011051 Solanum tuberosum HOM05D004973 ORTHO05D006119 4.2e-28 129.4 267 36.7
CSS0008181 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 4.7e-27 125.9 277 37.9
Peaxi162Scf00472g00079 Petunia axillaris HOM05D004973 ORTHO05D006119 1.0e-26 124.8 269 35.7
CSS0037973 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 1.4e-26 124.4 298 36.9
CSS0000366 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 3.9e-26 122.9 277 37.5
Solyc10g084420.2 Solanum lycopersicum HOM05D004973 ORTHO05D006119 1.5e-25 120.9 262 36.3
Migut.L01647 Erythranthe guttata HOM05D004973 ORTHO05D006119 3.3e-25 119.8 295 34.2
Nitab4.5_0000202g0430 Nicotiana tabacum HOM05D004973 ORTHO05D006119 5.7e-25 119.0 284 35.2
Sopen10g033860 Solanum pennellii HOM05D004973 ORTHO05D006119 5.7e-25 119.0 263 35.4
Dinv35683 Davidia involucrata HOM05D004973 ORTHO05D006119 2.2e-24 117.1 293 34.8
Lj3A975T70 Lonicera japonica HOM05D004973 ORTHO05D006119 3.1e-23 113.2 275 35.3
Ciclev10012401m.g Citrus clementina HOM05D004973 ORTHO05D006119 1.2e-22 111.3 279 38.4
Nitab4.5_0016310g0010 Nicotiana tabacum HOM05D004973 ORTHO05D006119 1.2e-22 111.3 280 35.4
Peaxi162Scf00597g00824 Petunia axillaris HOM05D004973 ORTHO05D006119 1.2e-22 111.3 267 34.5
GSVIVG01025573001 Vitis vinifera HOM05D004973 ORTHO05D009107 1.2e-22 111.3 277 35.4
Haze_20682 Corylus avellana HOM05D004973 ORTHO05D006119 2.0e-22 110.5 277 35.4
Nitab4.5_0000643g0210 Nicotiana tabacum HOM05D004973 ORTHO05D006119 7.7e-22 108.6 281 34.5
SGA_v2.0_scaffold35G14182 Striga asiatica HOM05D004973 ORTHO05D006119 3.8e-21 106.3 296 31.4
Manes.09G071500 Manihot esculenta HOM05D004973 ORTHO05D006119 5.0e-21 105.9 269 35.7
Manes.08G000800 Manihot esculenta HOM05D004973 ORTHO05D006119 6.5e-21 105.5 262 33.2
CiPaw.09G185000 Carya illinoinensis HOM05D004973 ORTHO05D006119 1.2e-19 101.3 278 33.5
Sc01g0003720 Simmondsia chinensis HOM05D004973 ORTHO05D006119 1.2e-19 101.3 212 37.3
vmacro20083 Vaccinium macrocarpon HOM05D004973 ORTHO05D006119 1.2e-19 101.3 267 33.3
Migut.J00395 Erythranthe guttata HOM05D004973 ORTHO05D006119 3.6e-19 99.8 264 32.2
COL.COLO4_10304 Corchorus olitorius HOM05D004973 ORTHO05D006119 6.1e-19 99.0 262 33.6
DCAR_017742 Daucus carota HOM05D004973 ORTHO05D006119 1.0e-18 98.2 285 33.3
QL07p045858 Quercus lobata HOM05D004973 ORTHO05D006119 1.0e-18 98.2 279 33.7
Gohir.A09G160200 Gossypium hirsutum HOM05D004973 ORTHO05D006119 2.3e-18 97.1 296 34.5
FAN14G1622 Fragaria x ananassa HOM05D004973 ORTHO05D006119 3.0e-18 96.7 291 33.0
MSTRG.10290 Avicennia marina HOM05D004973 ORTHO05D006119 4.0e-18 96.3 97 57.7
Eucgr.A01206 Eucalyptus grandis HOM05D004973 ORTHO05D006119 8.8e-18 95.1 270 33.3
Potri.006G216300 Populus trichocarpa HOM05D004973 ORTHO05D006119 1.2e-17 94.7 269 32.0
Nn2g12943 Nelumbo nucifera HOM05D004973 ORTHO05D006119 2.0e-17 94.0 277 31.8
Lj2A104T80 Lonicera japonica HOM05D004973 ORTHO05D006119 2.6e-17 93.6 157 43.9
CiPaw.10G138900 Carya illinoinensis HOM05D004973 ORTHO05D006119 3.3e-17 93.2 305 36.1
Gorai.006G177300 Gossypium raimondii HOM05D004973 ORTHO05D006119 4.4e-17 92.8 277 34.7
Thecc.05G050500 Theobroma cacao HOM05D004973 ORTHO05D006119 5.7e-17 92.4 288 33.3
FAN09G0990 Fragaria x ananassa HOM05D004973 ORTHO05D006119 9.7e-17 91.7 267 31.8
Medtr1g067220 Medicago truncatula HOM05D004973 ORTHO05D006119 9.7e-17 91.7 265 31.7
Oeu060067.1 Olea europaea HOM05D004973 ORTHO05D006119 9.7e-17 91.7 319 30.4
Sabra06G0166700 Salix brachista HOM05D004973 ORTHO05D006119 9.7e-17 91.7 266 33.1
arahy.Tifrunner.gnm1.ann1.C8BSPY Arachis hypogaea HOM05D004973 ORTHO05D006119 2.2e-16 90.5 278 29.5
FAN05G3543 Fragaria x ananassa HOM05D004973 ORTHO05D006119 2.2e-16 90.5 283 30.7
TAR623G0749 Trochodendron aralioides HOM05D004973 ORTHO05D006119 2.8e-16 90.1 87 56.3
Oeu029113.1 Olea europaea HOM05D004973 ORTHO05D006119 3.7e-16 89.7 264 31.4
Cc06_g03330 Coffea canephora HOM05D004973 ORTHO05D006119 4.8e-16 89.4 305 32.8
Aqoxy4G03126 Aquilegia oxysepala HOM05D004973 ORTHO05D006119 6.3e-16 89.0 108 50.0
ClCG04G008700 Citrullus lanatus HOM05D004973 ORTHO05D006119 6.3e-16 89.0 78 60.3
Hund12070 Selenicereus undatus HOM05D004973 ORTHO05D006119 6.3e-16 89.0 259 35.1
CANSAT80G1895 Cannabis sativa HOM05D004973 ORTHO05D006119 8.3e-16 88.6 261 32.2
DCAR_014954 Daucus carota HOM05D000267 ORTHO05D000298 8.3e-16 88.6 95 57.9
Atru.chr8.2512 Acer truncatum HOM05D004973 ORTHO05D006119 1.4e-15 87.8 71 64.8
CsaV3_4G024460 Cucumis sativus L. HOM05D004973 ORTHO05D006119 1.4e-15 87.8 78 60.3
Actinidia19731 Actinidia chinensis HOM05D004973 ORTHO05D006119 1.8e-15 87.4 277 33.6
arahy.Tifrunner.gnm1.ann1.P2DQEA Arachis hypogaea HOM05D004973 ORTHO05D006119 1.8e-15 87.4 278 30.2
Cpa.g.sc114.29 Carica papaya HOM05D004973 ORTHO05D006119 1.8e-15 87.4 264 33.0
FAN02G2240 Fragaria x ananassa HOM05D004973 ORTHO05D006119 3.1e-15 86.7 191 37.7
MSTRG.26739 Avicennia marina HOM05D004973 ORTHO05D006119 5.3e-15 85.9 333 28.5
MELO3C003079.2 Cucumis melo HOM05D004973 ORTHO05D006119 5.3e-15 85.9 270 32.2
FvH4_6g14910 Fragaria vesca HOM05D004973 ORTHO05D006119 7.0e-15 85.5 143 43.4
Gohir.D09G155800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 1.2e-14 84.7 115 52.2
Lj5g0023317 Lotus japonicus HOM05D004973 ORTHO05D006119 1.6e-14 84.3 283 32.2
AL4G33680 Arabidopsis lyrata HOM05D004973 ORTHO05D006119 2.7e-14 83.6 108 50.0
Nn2g10587 Nelumbo nucifera HOM05D004973 ORTHO05D006119 3.5e-14 83.2 151 37.1
Sp4g19620 Schrenkiella parvula HOM05D004973 ORTHO05D006119 3.5e-14 83.2 103 52.4
A03p20600 Brassica napus HOM05D000861 ORTHO05D001799 4.5e-14 82.8 188 36.7
Potri.016G082700 Populus trichocarpa HOM05D004973 ORTHO05D006119 4.5e-14 82.8 187 40.1
MD12G1129800 Malus domestica HOM05D004973 ORTHO05D006119 1.0e-13 81.6 276 32.6
SalBow4G1465 Salvia bowleyana HOM05D004973 ORTHO05D006119 1.0e-13 81.6 124 46.0
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 1.3e-13 81.3 269 32.0
BraA03t11302Z Brassica rapa HOM05D000861 ORTHO05D001799 2.2e-13 80.5 68 63.2
Glyma.19G176500 Glycine max HOM05D004973 ORTHO05D006119 2.2e-13 80.5 175 35.4
MSTRG.19121 Avicennia marina HOM05D004973 ORTHO05D006119 2.9e-13 80.1 97 52.6
Prupe.6G245100 Prunus persica HOM05D004973 ORTHO05D009107 2.9e-13 80.1 275 30.5
TWI53G0396 Tripterygium wilfordii HOM05D004973 ORTHO05D006119 5.0e-13 79.3 135 43.0
Carub.0004s1921 Capsella rubella HOM05D004973 ORTHO05D006119 6.5e-13 79.0 103 50.5
Thhalv10017275m.g Eutrema salsugineum HOM05D004973 ORTHO05D006119 6.5e-13 79.0 179 38.5
C03p24200 Brassica napus HOM05D000861 ORTHO05D001799 8.5e-13 78.6 65 64.6
BolC3t14814H Brassica oleracea HOM05D004973 ORTHO05D006119 8.5e-13 78.6 65 64.6
Nitab4.5_0007045g0010 Nicotiana tabacum HOM05D004973 ORTHO05D006119 8.5e-13 78.6 246 33.7
BcaNung06612 Brassica carinata HOM05D004973 ORTHO05D006119 1.5e-12 77.8 106 50.9
THA.LOC104823441 Tarenaya hassleriana HOM05D004973 ORTHO05D006119 1.5e-12 77.8 109 51.4
MD04G1111000 Malus domestica HOM05D004973 ORTHO05D006119 1.9e-12 77.4 106 49.1
Sed0023997 Sechium edule HOM05D004973 ORTHO05D006119 1.9e-12 77.4 77 58.4
EL10Ac7g17266 Beta vulgaris HOM05D004973 ORTHO05D006119 2.5e-12 77.0 270 29.6
Glyma.10G047400 Glycine max HOM05D004973 ORTHO05D006119 3.2e-12 76.6 263 30.0
BraA04t18326Z Brassica rapa HOM05D004973 ORTHO05D006119 4.2e-12 76.3 106 48.1
CAN.G867.2 Capsicum annuum HOM05D004973 ORTHO05D006119 4.2e-12 76.3 245 34.7
Gohir.D04G116800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 4.2e-12 76.3 261 30.7
PSO384G3176 Papaver somniferum HOM05D004973 ORTHO05D006119 4.2e-12 76.3 128 39.1
RcHm_v2.0_Chr3g0468111 Rosa chinensis HOM05D004973 ORTHO05D006119 4.2e-12 76.3 188 34.6
TPR.G35656 Trifolium pratense HOM05D004973 ORTHO05D006119 7.2e-12 75.5 137 43.1
Glyma.03G176000 Glycine max HOM05D004973 ORTHO05D006119 9.4e-12 75.1 175 34.3
BcaNung06611 Brassica carinata HOM05D004973 ORTHO05D006119 1.2e-11 74.7 179 37.4
C04p65800 Brassica napus HOM05D004973 ORTHO05D006119 1.2e-11 74.7 179 37.4
BolC4t28082H Brassica oleracea HOM05D004973 ORTHO05D006119 1.2e-11 74.7 179 37.4
VMungo0720G0246 Vigna mungo HOM05D004973 ORTHO05D006119 1.2e-11 74.7 286 30.1
Os03g0283400 Oryza sativa ssp. japonica HOM05D004973 ORTHO05D006119 1.6e-11 74.3 296 31.8
PGR004G2597 Punica granatum HOM05D004973 ORTHO05D006119 1.6e-11 74.3 127 39.4
AT2G37300 Arabidopsis thaliana HOM05D004973 ORTHO05D006119 2.1e-11 73.9 173 35.8
Zm00001eb012960 Zea mays HOM05D004973 ORTHO05D006119 2.1e-11 73.9 87 52.9
RhsimUnG0120800 Rhododendron simsii HOM05D004973 ORTHO05D006119 4.7e-11 72.8 233 35.6
Psat6g069760 Pisum sativum HOM05D004973 ORTHO05D006119 6.1e-11 72.4 70 57.1
A05p08610 Brassica napus HOM05D004973 ORTHO05D006119 8.0e-11 72.0 61 63.9
BcaC02g07519 Brassica carinata HOM05D004973 ORTHO05D006119 1.0e-10 71.6 65 61.5
CsaV3_3G035290 Cucumis sativus L. HOM05D004973 ORTHO05D006119 1.0e-10 71.6 265 30.6
A04p28480 Brassica napus HOM05D004973 ORTHO05D006119 1.4e-10 71.2 179 36.3
THA.LOC104805339 Tarenaya hassleriana HOM05D004973 ORTHO05D006119 1.4e-10 71.2 119 43.7
CAN.G867.6 Capsicum annuum HOM05D004973 ORTHO05D006119 1.8e-10 70.9 277 30.7
C04p10700 Brassica napus HOM05D004973 ORTHO05D006119 2.3e-10 70.5 61 63.9
VMungo1383G2298 Vigna mungo HOM05D004973 ORTHO05D006119 3.0e-10 70.1 196 30.1
Lalb_Chr06g0171201 Lupinus albus HOM05D004973 ORTHO05D006119 5.2e-10 69.3 120 42.5
Gorai.009G421700 Gossypium raimondii HOM05D004973 ORTHO05D006119 8.8e-10 68.6 191 34.6
MBI05_g16176_MAGBIO Magnolia biondii HOM05D004973 ORTHO05D006119 1.2e-09 68.2 58 56.9
Lalb_Chr02g0153461 Lupinus albus HOM05D004973 ORTHO05D006119 1.5e-09 67.8 92 48.9
Gohir.A04G077600 Gossypium hirsutum HOM05D004973 ORTHO05D006119 2.6e-09 67.0 190 34.2
HPP92_001696 Vanilla planifolia HOM05D004973 ORTHO05D006119 2.6e-09 67.0 134 36.6
MELO3C009296.2 Cucumis melo HOM05D004973 ORTHO05D006119 1.3e-08 64.7 262 28.2
unitig_60.g25816 Utricularia gibba HOM05D004973 ORTHO05D006119 1.3e-08 64.7 189 34.4
CARHR132290 Cardamine hirsuta HOM05D004973 ORTHO05D006119 1.7e-08 64.3 148 39.2
Eucgr.K03187 Eucalyptus grandis HOM05D004973 ORTHO05D006119 1.7e-08 64.3 264 28.0
arahy.Tifrunner.gnm1.ann1.X85SHR Arachis hypogaea HOM05D004973 ORTHO05D006119 2.8e-08 63.5 68 48.5
arahy.Tifrunner.gnm1.ann1.4HMS3J Arachis hypogaea HOM05D004973 ORTHO05D006119 8.3e-08 62.0 68 47.1
CAN.G608.34 Capsicum annuum HOM05D004973 ORTHO05D006119 1.1e-07 61.6 242 30.6
Sed0025194 Sechium edule HOM05D004973 ORTHO05D006119 3.1e-07 60.1 123 35.8
ClCG10G020720 Citrullus lanatus HOM05D004973 ORTHO05D006119 5.4e-07 59.3 78 47.4
Phvul.007G161600 Phaseolus vulgaris HOM05D004973 ORTHO05D006119 7.0e-07 58.9 261 29.5
ATR0594G102 Amborella trichopoda HOM05D004973 ORTHO05D006119 9.1e-07 58.5 83 43.4
PGR004G0295 Punica granatum HOM05D004973 ORTHO05D006119 9.1e-07 58.5 284 27.8


User provided reference genes

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