Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G2296 Erigeron canadensis HOM05D003981 ORTHO05D003666 4.7e-224 780.8 374 100.0
ECA238G3932 Erigeron canadensis HOM05D000007 ORTHO05D003666 6.9e-58 228.8 149 71.1
ECA238G2517 Erigeron canadensis HOM05D000138 ORTHO05D000078 5.5e-47 192.6 176 55.1
ECA238G0967 Erigeron canadensis HOM05D000007 ORTHO05D003666 8.8e-45 185.3 171 56.7
HanXRQChr13g0418481 Helianthus annuus HOM05D000007 ORTHO05D003666 6.8e-29 132.5 170 40.0
Lsat_1_v5_gn_2_52821 Lactuca sativa HOM05D003981 ORTHO05D003666 1.5e-28 131.3 171 39.8
HanXRQChr13g0419531 Helianthus annuus HOM05D000007 ORTHO05D003666 2.0e-28 131.0 177 39.0
HanXRQChr13g0419481 Helianthus annuus HOM05D000007 ORTHO05D003666 2.2e-27 127.5 163 45.4
HanXRQChr13g0419551 Helianthus annuus HOM05D000007 ORTHO05D003666 9.1e-26 122.1 171 42.7
HanXRQChr13g0419581 Helianthus annuus HOM05D000007 ORTHO05D003666 2.7e-25 120.6 168 39.9
HanXRQChr13g0419571 Helianthus annuus HOM05D000007 ORTHO05D003666 2.9e-24 117.1 172 40.1
HanXRQChr14g0447501 Helianthus annuus HOM05D000007 ORTHO05D000017 2.5e-23 114.0 164 41.5
ECA232G2288 Erigeron canadensis HOM05D000007 ORTHO05D003666 7.2e-23 112.5 177 36.2
HanXRQChr14g0447521 Helianthus annuus HOM05D000007 ORTHO05D003666 4.4e-20 103.2 163 38.7
Lsat_1_v5_gn_2_53440 Lactuca sativa HOM05D003981 ORTHO05D003666 4.2e-15 86.7 130 36.2
ECA238G1941 Erigeron canadensis HOM05D000007 ORTHO05D003666 8.0e-14 82.4 108 38.0
HanXRQChr13g0419561 Helianthus annuus HOM05D000007 ORTHO05D003666 5.2e-13 79.7 127 39.4
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 6.3e-11 72.8 94 41.5
CSS0040592 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 4.1e-10 70.1 168 31.0
CSS0034833 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 7.0e-10 69.3 168 31.0
Prupe.2G209200 Prunus persica HOM05D003981 ORTHO05D003666 2.7e-09 67.4 115 32.2
QL05p054335 Quercus lobata HOM05D000007 ORTHO05D003666 2.7e-09 67.4 166 30.7
Rhsim07G0186100 Rhododendron simsii HOM05D003981 ORTHO05D003666 4.5e-09 66.6 181 27.1
Lj3C654G5 Lonicera japonica HOM05D000007 ORTHO05D000017 7.8e-09 65.9 320 22.8
RcHm_v2.0_Chr3g0480281 Rosa chinensis HOM05D003981 ORTHO05D003666 7.8e-09 65.9 107 34.6
DCAR_002092 Daucus carota HOM05D000007 ORTHO05D003666 1.7e-08 64.7 152 30.3
RcHm_v2.0_Chr3g0449831 Rosa chinensis HOM05D003981 ORTHO05D003666 2.9e-08 63.9 115 30.4
TWI59G0188 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 3.9e-08 63.5 103 35.9
Dinv36193 Davidia involucrata HOM05D003981 ORTHO05D003666 5.0e-08 63.2 100 39.0
FAN02G2079 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.0e-08 63.2 165 30.9
FvH4_5g38320 Fragaria vesca HOM05D003981 ORTHO05D003666 8.6e-08 62.4 123 30.9
A02p02780 Brassica napus HOM05D000171 ORTHO05D000101 1.5e-07 61.6 160 26.9
FAN09G0012 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.5e-07 61.6 112 34.8
RcHm_v2.0_Chr6g0253541 Rosa chinensis HOM05D003981 ORTHO05D003666 1.5e-07 61.6 110 35.5
AUR62036918 Chenopodium quinoa HOM05D000007 ORTHO05D000039 1.9e-07 61.2 129 24.8
FAN09G1093 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.9e-07 61.2 178 27.0
FAN03G0829 Fragaria x ananassa HOM05D001225 ORTHO05D001252 2.5e-07 60.8 105 29.5
FAN14G0912 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.5e-07 60.8 178 27.0
ECA238G3085 Erigeron canadensis HOM05D000007 ORTHO05D003666 3.3e-07 60.5 76 42.1
FAN08G0796 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.3e-07 60.5 106 34.0
FAN18G0964 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.3e-07 60.1 116 32.8
MD04G1179800 Malus domestica HOM05D003981 ORTHO05D003666 4.3e-07 60.1 124 33.9
FvH4_6g14781 Fragaria vesca HOM05D003981 ORTHO05D003666 5.6e-07 59.7 120 33.3
FAN14G2468 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.6e-07 59.7 120 33.3
FAN08G0629 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.5e-07 58.9 116 32.8
FAN10G2747 Fragaria x ananassa HOM05D001225 ORTHO05D001252 9.5e-07 58.9 105 28.6
FvH4_5g08848 Fragaria vesca HOM05D003981 ORTHO05D003666 1.2e-06 58.5 120 33.3
FvH4_3g13181 Fragaria vesca HOM05D003981 ORTHO05D003666 1.6e-06 58.2 135 28.9
FAN06G2056 Fragaria x ananassa HOM05D001225 ORTHO05D001252 1.6e-06 58.2 109 28.4
FAN27G2648 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-06 58.2 89 39.3
Prupe.2G095900 Prunus persica HOM05D003981 ORTHO05D003666 1.6e-06 58.2 123 32.5
RcHm_v2.0_Chr2g0164001 Rosa chinensis HOM05D003981 ORTHO05D003666 1.6e-06 58.2 110 34.5
FvH4_2g04190 Fragaria vesca HOM05D003981 ORTHO05D003666 2.1e-06 57.8 89 39.3
FAN24G2659 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.1e-06 57.8 89 39.3
FAN04G2111 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.6e-06 57.0 109 30.3
COL.COLO4_20207 Corchorus olitorius HOM05D000007 ORTHO05D000017 4.7e-06 56.6 169 25.4
FvH4_5g07470 Fragaria vesca HOM05D003981 ORTHO05D003666 6.1e-06 56.2 120 30.8
FAN01G2610 Fragaria x ananassa HOM05D001225 ORTHO05D001252 6.1e-06 56.2 105 27.6
FAN02G2482 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.1e-06 56.2 115 33.9
FvH4_6g45801 Fragaria vesca HOM05D003981 ORTHO05D003666 8.0e-06 55.8 138 27.5
FAN08G0171 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.0e-06 55.8 110 30.9
SalBow1G4513 Salvia bowleyana HOM05D000007 ORTHO05D000017 8.0e-06 55.8 139 28.1
SalBow3G0457 Salvia bowleyana HOM05D000007 ORTHO05D000017 8.0e-06 55.8 139 28.1


User provided reference genes

Program Settings