Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G2213 Erigeron canadensis HOM05D001343 ORTHO05D007223 0.0e+00 1183.3 798 100.0
HanXRQChr14g0442391 Helianthus annuus HOM05D001343 ORTHO05D007223 1.1e-262 910.2 804 78.2
Dinv08526 Davidia involucrata HOM05D001343 ORTHO05D007223 1.8e-209 733.4 808 60.6
Lsat_1_v5_gn_2_74420 Lactuca sativa HOM05D001343 ORTHO05D007223 8.6e-207 724.5 807 65.9
Actinidia17384 Actinidia chinensis HOM05D001343 ORTHO05D007223 1.7e-191 673.7 808 57.3
TAR381G1734 Trochodendron aralioides HOM05D001343 ORTHO05D007223 3.6e-181 639.4 808 60.8
Hma1.2p1_0300F.1_g118160 Hydrangea macrophylla HOM05D001343 ORTHO05D007223 8.9e-180 634.8 816 55.9
Duzib147G0638 Durio zibethinus HOM05D001343 ORTHO05D007223 1.2e-176 624.4 807 59.9
GSVIVG01003839001 Vitis vinifera HOM05D001343 ORTHO05D007223 7.3e-174 615.1 741 59.5
QL06p052741 Quercus lobata HOM05D001343 ORTHO05D007223 3.6e-173 612.8 843 53.4
Atru.chr3.956 Acer truncatum HOM05D001343 ORTHO05D007223 4.0e-172 609.4 774 54.5
Sabra05G0082500 Salix brachista HOM05D001343 ORTHO05D007223 9.0e-172 608.2 762 60.2
CANSAT25G0854 Cannabis sativa HOM05D001343 ORTHO05D007223 2.6e-171 606.7 737 60.2
CANSAT25G1453 Cannabis sativa HOM05D001343 ORTHO05D007223 3.4e-171 606.3 737 60.1
Dinv40173 Davidia involucrata HOM05D001343 ORTHO05D007223 7.6e-171 605.1 515 66.6
Duzib187G0329 Durio zibethinus HOM05D001343 ORTHO05D007223 6.4e-170 602.1 811 54.0
Potri.005G099800 Populus trichocarpa HOM05D001343 ORTHO05D007223 6.4e-170 602.1 763 59.6
Lalb_Chr05g0211921 Lupinus albus HOM05D001343 ORTHO05D007223 1.9e-169 600.5 807 57.4
PSO210G1702 Papaver somniferum HOM05D001343 ORTHO05D007223 5.4e-169 599.0 752 59.4
Aqoxy5G01035 Aquilegia oxysepala HOM05D001343 ORTHO05D007223 1.7e-167 594.0 809 54.5
CiPaw.07G004100 Carya illinoinensis HOM05D001343 ORTHO05D007223 1.1e-166 591.3 808 55.7
Hund03615 Selenicereus undatus HOM05D001343 ORTHO05D007223 1.1e-166 591.3 804 57.5
MD15G1233300 Malus domestica HOM05D001343 ORTHO05D007223 4.3e-166 589.3 745 54.8
Prupe.7G179600 Prunus persica HOM05D001343 ORTHO05D007223 2.8e-165 586.6 747 57.8
PSO170G3735 Papaver somniferum HOM05D001343 ORTHO05D007223 8.1e-165 585.1 752 61.0
Nitab4.5_0000702g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 1.1e-164 584.7 806 56.1
Peaxi162Scf01446g00025 Petunia axillaris HOM05D001343 ORTHO05D007223 1.4e-164 584.3 810 54.7
Sed0023593 Sechium edule HOM05D001343 ORTHO05D007223 2.4e-164 583.6 804 55.2
Haze_03675 Corylus avellana HOM05D001343 ORTHO05D007223 9.0e-164 581.6 822 55.2
CsaV3_3G000380 Cucumis sativus L. HOM05D001343 ORTHO05D007223 9.9e-163 578.2 806 56.2
TWI09G1271 Tripterygium wilfordii HOM05D001343 ORTHO05D007223 1.1e-161 574.7 797 54.8
vmacro20524 Vaccinium macrocarpon HOM05D001343 ORTHO05D007223 5.4e-161 572.4 771 57.5
ClCG10G000340 Citrullus lanatus HOM05D001343 ORTHO05D007223 9.3e-161 571.6 816 56.6
Gohir.A10G099100 Gossypium hirsutum HOM05D001343 ORTHO05D007223 1.2e-160 571.2 753 60.0
SGA_v2.0_scaffold12G05990 Striga asiatica HOM05D001343 ORTHO05D007223 8.1e-157 558.5 814 51.6
QL06p053829 Quercus lobata HOM05D001343 ORTHO05D007223 1.3e-154 551.2 809 54.8
Thecc.01G007100 Theobroma cacao HOM05D001343 ORTHO05D007223 1.3e-154 551.2 808 57.1
CSS0043948 Camellia sinensis var. sinensis HOM05D001343 ORTHO05D007223 1.7e-154 550.8 799 56.6
TPR.G25095 Trifolium pratense HOM05D001343 ORTHO05D007223 4.9e-154 549.3 811 55.5
Cpa.g.sc55.186 Carica papaya HOM05D001343 ORTHO05D007223 7.1e-153 545.4 752 59.0
Gorai.011G097900 Gossypium raimondii HOM05D001343 ORTHO05D007223 2.3e-151 540.4 753 58.4
Thhalv10003686m.g Eutrema salsugineum HOM05D001343 ORTHO05D007223 3.9e-151 539.7 751 57.8
Gohir.D10G089000 Gossypium hirsutum HOM05D001343 ORTHO05D007223 6.7e-151 538.9 753 58.3
AT5G66030 Arabidopsis thaliana HOM05D001343 ORTHO05D007223 5.6e-150 535.8 816 54.3
EL10Ac6g15468 Beta vulgaris HOM05D001343 ORTHO05D007223 1.8e-148 530.8 822 52.2
Actinidia22910 Actinidia chinensis HOM05D001343 ORTHO05D007223 6.9e-148 528.9 819 53.2
MD02G1119300 Malus domestica HOM05D001343 ORTHO05D007223 7.6e-147 525.4 745 52.3
Phvul.002G114800 Phaseolus vulgaris HOM05D001343 ORTHO05D007223 3.8e-146 523.1 751 47.8
THA.LOC104826465 Tarenaya hassleriana HOM05D001343 ORTHO05D007223 1.4e-145 521.2 747 54.9
Manes.02G112700 Manihot esculenta HOM05D001343 ORTHO05D007223 2.5e-145 520.4 752 57.0
FvH4_1g10521 Fragaria vesca HOM05D001343 ORTHO05D007223 1.2e-144 518.1 748 54.8
COL.COLO4_22537 Corchorus olitorius HOM05D001343 ORTHO05D007223 1.3e-143 514.6 809 51.7
MSTRG.15594 Avicennia marina HOM05D001343 ORTHO05D007223 5.1e-143 512.7 808 49.6
Lj2g0004784 Lotus japonicus HOM05D001343 ORTHO05D007223 5.1e-143 512.7 812 53.4
FAN28G2189 Fragaria x ananassa HOM05D001343 ORTHO05D007223 1.9e-142 510.8 745 53.6
BcaB04g20130 Brassica carinata HOM05D001343 ORTHO05D002008 3.3e-142 510.0 788 51.4
FAN23G1852 Fragaria x ananassa HOM05D001343 ORTHO05D007223 7.4e-142 508.8 745 51.1
Atru.chr3.968 Acer truncatum HOM05D001343 ORTHO05D007223 3.7e-141 506.5 770 50.1
FAN19G1061 Fragaria x ananassa HOM05D001343 ORTHO05D007223 3.7e-141 506.5 749 53.8
Glyma.01G159900 Glycine max HOM05D001343 ORTHO05D007223 1.8e-140 504.2 798 51.6
CAN.G890.76 Capsicum annuum HOM05D001343 ORTHO05D007223 1.5e-139 501.1 805 47.5
ATR0661G538 Amborella trichopoda HOM05D001343 ORTHO05D007223 2.5e-137 493.8 757 51.3
AL8G45590 Arabidopsis lyrata HOM05D001343 ORTHO05D007223 4.2e-137 493.0 758 54.1
MELO3C013733.2 Cucumis melo HOM05D001343 ORTHO05D007223 5.5e-137 492.7 810 51.7
arahy.Tifrunner.gnm1.ann1.AU9Y8G Arachis hypogaea HOM05D001343 ORTHO05D007223 1.2e-136 491.5 753 53.9
arahy.Tifrunner.gnm1.ann1.SLQH96 Arachis hypogaea HOM05D001343 ORTHO05D007223 1.2e-136 491.5 753 53.9
Ciclev10024922m.g Citrus clementina HOM05D001343 ORTHO05D007223 3.6e-136 490.0 807 47.2
Nitab4.5_0002967g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 7.9e-136 488.8 805 51.7
Cc07_g11650 Coffea canephora HOM05D001343 ORTHO05D007223 1.8e-135 487.6 750 59.5
PGR083G0487 Punica granatum HOM05D001343 ORTHO05D007223 1.7e-133 481.1 751 49.5
Ah.03g148390 Amaranthus hybridus HOM05D001343 ORTHO05D007223 1.4e-132 478.0 802 51.5
Carub.0008s2848 Capsella rubella HOM05D001343 ORTHO05D007223 9.1e-132 475.3 799 46.7
Sp2g30660 Schrenkiella parvula HOM05D001343 ORTHO05D007223 7.7e-131 472.2 752 53.9
Nn5g30956 Nelumbo nucifera HOM05D001343 ORTHO05D007223 2.9e-130 470.3 777 47.9
Medtr5g023770 Medicago truncatula HOM05D001343 ORTHO05D007223 6.5e-130 469.2 752 52.4
A09p10220 Brassica napus HOM05D001343 ORTHO05D002008 1.9e-129 467.6 730 52.1
BraA09t36667Z Brassica rapa HOM05D001343 ORTHO05D002008 1.6e-128 464.5 727 51.6
Migut.L00734 Erythranthe guttata HOM05D001343 ORTHO05D007223 2.7e-128 463.8 806 50.5
BcaC04g23105 Brassica carinata HOM05D001343 ORTHO05D002008 4.7e-128 463.0 730 52.3
C09p12110 Brassica napus HOM05D001343 ORTHO05D002008 4.7e-128 463.0 730 52.3
BolC9t54101H Brassica oleracea HOM05D001343 ORTHO05D002008 6.1e-128 462.6 737 51.3
SalBow5G5069 Salvia bowleyana HOM05D001343 ORTHO05D007223 1.4e-127 461.5 861 46.2
Os07g0472500 Oryza sativa ssp. japonica HOM05D001343 ORTHO05D007223 7.4e-126 455.7 748 51.6
Sopen02g027640 Solanum pennellii HOM05D001343 ORTHO05D007223 2.8e-125 453.8 805 47.3
AUR62029449 Chenopodium quinoa HOM05D001343 ORTHO05D007223 1.4e-124 451.4 812 48.0
Sc16g0001690 Simmondsia chinensis HOM05D001343 ORTHO05D007223 1.5e-123 448.0 798 49.5
Solyc02g082840.3 Solanum lycopersicum HOM05D001343 ORTHO05D007223 1.3e-122 444.9 801 46.3
Glyma.11G084200 Glycine max HOM05D001343 ORTHO05D007223 3.2e-121 440.3 796 48.7
Lj4A232G45 Lonicera japonica HOM05D001343 ORTHO05D007223 6.7e-119 432.6 778 50.8
AUR62003379 Chenopodium quinoa HOM05D001343 ORTHO05D007223 2.0e-118 431.0 812 45.8
Zm00001eb104860 Zea mays HOM05D001343 ORTHO05D007223 5.7e-118 429.5 742 45.6
Eucgr.J02528 Eucalyptus grandis HOM05D001343 ORTHO05D007223 5.3e-116 422.9 798 46.5
Ca_24963_v3 Cicer arietinum L. HOM05D001343 ORTHO05D007223 1.9e-113 414.5 831 45.8
Manes.01G153700 Manihot esculenta HOM05D001343 ORTHO05D007223 5.5e-113 412.9 501 51.5
VMungo1215G1031 Vigna mungo HOM05D001343 ORTHO05D007223 1.4e-108 398.3 804 43.7
DCAR_011583 Daucus carota HOM05D001343 ORTHO05D007223 1.0e-106 392.1 810 48.6
unitig_88.g27773 Utricularia gibba HOM05D001343 ORTHO05D007223 1.2e-104 385.2 541 45.7
CARHR281730 Cardamine hirsuta HOM05D001343 ORTHO05D007223 1.3e-98 365.2 423 53.2
HPP92_003502 Vanilla planifolia HOM05D001343 ORTHO05D007223 2.0e-94 351.3 757 41.9
Mapoly0179s0009 Marchantia polymorpha HOM05D001343 ORTHO05D007223 2.1e-88 331.3 553 41.0
AagrBONN_evm.TU.Sc2ySwM_344.163 Anthoceros agrestis HOM05D001343 ORTHO05D007223 7.5e-86 322.8 545 43.7
SEGI_12448 Sequoiadendron giganteum HOM05D001343 ORTHO05D007223 6.2e-72 276.6 761 35.5
Pp3c20_18210 Physcomitrium patens HOM05D001343 ORTHO05D007223 1.0e-66 259.2 546 36.8
CDE06G1375 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 1.5e-65 255.4 276 52.9
Actinidia26548 Actinidia chinensis HOM05D001343 ORTHO05D007223 7.6e-62 243.0 208 64.9
CDE07G1064 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 1.3e-61 242.3 259 53.7
Pp3c23_9770 Physcomitrium patens HOM05D001343 ORTHO05D007223 2.7e-59 234.6 518 37.3
RcHm_v2.0_Chr2g0097461 Rosa chinensis HOM05D001343 ORTHO05D007223 6.0e-59 233.4 531 48.0
RcHm_v2.0_Chr2g0097581 Rosa chinensis HOM05D001343 ORTHO05D007223 2.4e-55 221.5 531 47.3
CDE07G1287 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 2.9e-53 214.5 243 52.7
RcHm_v2.0_Chr2g0097451 Rosa chinensis HOM05D001343 ORTHO05D007223 8.7e-50 203.0 190 62.1
Psat2g150480 Pisum sativum HOM05D001343 ORTHO05D007223 3.3e-49 201.1 197 59.4
Psat2g150520 Pisum sativum HOM05D001343 ORTHO05D007223 1.9e-44 185.3 528 44.1
CBR_g34809 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-42 178.7 349 41.5
Migut.L00811 Erythranthe guttata HOM05D001343 ORTHO05D007223 2.5e-41 174.9 132 71.2
Migut.L00927 Erythranthe guttata HOM05D001343 ORTHO05D007223 3.1e-39 167.9 386 54.9
Rhsim10G0198000 Rhododendron simsii HOM05D001343 ORTHO05D007223 3.8e-37 161.0 161 60.9
QL06p053793 Quercus lobata HOM05D001343 ORTHO05D007223 1.6e-35 155.6 137 67.2
ECA238G3708 Erigeron canadensis HOM05D012425 ORTHO05D014354 2.2e-29 135.2 166 55.4
RcHm_v2.0_Chr2g0097571 Rosa chinensis HOM05D001343 ORTHO05D007223 6.7e-26 123.6 123 61.0
arahy.Tifrunner.gnm1.ann1.ISY8LN Arachis hypogaea HOM05D001343 ORTHO05D007223 9.0e-23 113.2 166 45.2
arahy.Tifrunner.gnm1.ann1.9PSP05 Arachis hypogaea HOM05D001343 ORTHO05D007223 3.4e-22 111.3 185 44.3
arahy.Tifrunner.gnm1.ann1.6P6C0I Arachis hypogaea HOM05D001343 ORTHO05D007223 8.5e-21 106.7 95 81.1
Cpa.g.sc1414.4 Carica papaya HOM05D001343 ORTHO05D007223 3.6e-19 101.3 262 57.3
Oeu032010.1 Olea europaea HOM05D001343 ORTHO05D007223 7.9e-19 100.1 165 46.1
Aa31LG1G14520 Aethionema arabicum HOM05D001343 ORTHO05D007223 2.6e-14 85.1 166 39.2
RcHm_v2.0_Chr6g0253501 Rosa chinensis HOM05D001343 ORTHO05D007223 5.9e-14 84.0 103 47.6
Actinidia26547 Actinidia chinensis HOM05D001343 ORTHO05D007223 1.6e-11 75.9 155 40.0
AL472U10010 Arabidopsis lyrata HOM05D001343 ORTHO05D007223 6.1e-11 73.9 107 38.3
arahy.Tifrunner.gnm1.ann1.T78FCF Arachis hypogaea HOM05D001343 ORTHO05D007223 6.1e-11 73.9 79 57.0
HPP92_003508 Vanilla planifolia HOM05D001343 ORTHO05D007223 5.1e-10 70.9 56 67.9
Glyma.18G186501 Glycine max HOM05D001343 ORTHO05D007223 6.7e-10 70.5 50 74.0
QL06p052753 Quercus lobata HOM05D003687 ORTHO05D007223 7.4e-09 67.0 43 76.7
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 4.8e-08 64.3 160 36.2
QL08p060543 Quercus lobata HOM05D000807 ORTHO05D008987 4.8e-08 64.3 155 37.4
arahy.Tifrunner.gnm1.ann1.QS1PDB Arachis hypogaea HOM05D001343 ORTHO05D007223 2.4e-07 62.0 131 33.6
CDE06G1191 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 2.6e-06 58.5 102 34.3


User provided reference genes

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