Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G2184 Erigeron canadensis HOM05D000320 ORTHO05D019108 5.7e-98 360.9 184 100.0
ECA236G4126 Erigeron canadensis HOM05D000320 ORTHO05D000532 1.1e-83 313.5 196 85.2
ECA248G3372 Erigeron canadensis HOM05D000320 ORTHO05D019108 5.2e-83 311.2 184 88.0
HanXRQChr05g0137961 Helianthus annuus HOM05D000320 ORTHO05D000532 4.9e-49 198.4 201 56.7
Lsat_1_v5_gn_8_63140 Lactuca sativa HOM05D000320 ORTHO05D000532 1.3e-41 173.7 205 54.6
Nitab4.5_0011752g0020 Nicotiana tabacum HOM05D000320 ORTHO05D000532 3.8e-25 119.0 212 40.6
Peaxi162Scf00391g00008 Petunia axillaris HOM05D000320 ORTHO05D000532 3.2e-24 115.9 214 39.7
CAN.G518.21 Capsicum annuum HOM05D000320 ORTHO05D000532 9.4e-24 114.4 218 38.5
Nitab4.5_0001021g0110 Nicotiana tabacum HOM05D000320 ORTHO05D000532 1.4e-22 110.5 215 39.5
Dinv42914 Davidia involucrata HOM05D000320 ORTHO05D000532 2.3e-22 109.8 216 38.0
Dinv43186 Davidia involucrata HOM05D000320 ORTHO05D000532 2.3e-22 109.8 216 38.0
QL02p091263 Quercus lobata HOM05D000320 ORTHO05D000532 3.9e-22 109.0 218 38.1
Solyc07g007140.3 Solanum lycopersicum HOM05D000320 ORTHO05D000532 5.1e-22 108.6 218 36.7
Sopen07g003190 Solanum pennellii HOM05D000320 ORTHO05D000532 5.1e-22 108.6 218 36.7
CiPaw.15G181800 Carya illinoinensis HOM05D000320 ORTHO05D000532 2.0e-21 106.7 217 37.3
Gohir.D05G012100 Gossypium hirsutum HOM05D000320 ORTHO05D000532 5.7e-21 105.1 221 38.5
Lj9C707G8 Lonicera japonica HOM05D000320 ORTHO05D000532 7.4e-21 104.8 199 41.2
Dinv41424 Davidia involucrata HOM05D000320 ORTHO05D000532 1.3e-20 104.0 216 35.6
Atru.chr7.262 Acer truncatum HOM05D000320 ORTHO05D000532 2.8e-20 102.8 222 36.0
Gohir.A05G011400 Gossypium hirsutum HOM05D000320 ORTHO05D000532 3.7e-20 102.4 221 38.0
Duzib150G1260 Durio zibethinus HOM05D000320 ORTHO05D000532 6.3e-20 101.7 206 38.3
Gorai.009G012400 Gossypium raimondii HOM05D000320 ORTHO05D000532 6.3e-20 101.7 207 38.2
Thecc.09G141700 Theobroma cacao HOM05D000320 ORTHO05D000532 3.1e-19 99.4 212 37.7
Oeu040791.1 Olea europaea HOM05D000320 ORTHO05D000532 4.1e-19 99.0 220 36.8
Prupe.7G254900 Prunus persica HOM05D000320 ORTHO05D000532 4.1e-19 99.0 218 37.6
GSVIVG01012894001 Vitis vinifera HOM05D000320 ORTHO05D000532 5.9e-18 95.1 216 35.2
Duzib187G0875 Durio zibethinus HOM05D000320 ORTHO05D000532 1.0e-17 94.4 207 37.7
COL.COLO4_24103 Corchorus olitorius HOM05D000320 ORTHO05D000532 1.3e-17 94.0 218 36.2
Duzib168G1261 Durio zibethinus HOM05D000320 ORTHO05D000532 1.7e-17 93.6 206 36.9
Nn8g39715 Nelumbo nucifera HOM05D000320 ORTHO05D000532 2.9e-17 92.8 217 36.4
VMungo1215G2781 Vigna mungo HOM05D000320 ORTHO05D000532 3.8e-17 92.4 210 38.1
Gohir.A06G050100 Gossypium hirsutum HOM05D000320 ORTHO05D000532 1.1e-16 90.9 193 39.4
Gohir.D06G049400 Gossypium hirsutum HOM05D000320 ORTHO05D000532 1.1e-16 90.9 192 39.1
Rhsim03G0254600 Rhododendron simsii HOM05D000320 ORTHO05D000532 1.1e-16 90.9 217 34.6
Hund21607 Selenicereus undatus HOM05D000320 ORTHO05D000532 1.1e-16 90.9 204 36.3
Cpa.g.sc46.87 Carica papaya HOM05D000320 ORTHO05D000532 2.5e-16 89.7 212 36.8
Eucgr.C00436 Eucalyptus grandis HOM05D000320 ORTHO05D000532 4.2e-16 89.0 207 33.8
Nn2g12245 Nelumbo nucifera HOM05D000320 ORTHO05D000532 4.2e-16 89.0 211 36.5
Manes.14G138500 Manihot esculenta HOM05D000320 ORTHO05D000532 5.5e-16 88.6 217 35.5
Haze_19320 Corylus avellana HOM05D000320 ORTHO05D000532 7.2e-16 88.2 206 35.4
CANSAT11G0220 Cannabis sativa HOM05D000320 ORTHO05D000532 1.2e-15 87.4 201 35.8
arahy.Tifrunner.gnm1.ann1.6H6W8R Arachis hypogaea HOM05D000320 ORTHO05D000532 2.7e-15 86.3 194 36.1
Oeu051704.2 Olea europaea HOM05D000320 ORTHO05D000532 2.7e-15 86.3 192 34.4
Phvul.003G174700 Phaseolus vulgaris HOM05D000320 ORTHO05D000532 3.6e-15 85.9 218 34.9
arahy.Tifrunner.gnm1.ann1.9WX8G8 Arachis hypogaea HOM05D000320 ORTHO05D000532 4.7e-15 85.5 194 35.6
Cfa020892 Carpinus fangiana HOM05D000320 ORTHO05D000532 4.7e-15 85.5 215 36.3
Gorai.010G056300 Gossypium raimondii HOM05D000320 ORTHO05D000532 7.9e-15 84.7 193 38.3
RcHm_v2.0_Chr2g0086681 Rosa chinensis HOM05D000320 ORTHO05D000532 1.0e-14 84.3 200 36.5
Psat0ss25082g0040 Pisum sativum HOM05D000320 ORTHO05D000532 2.3e-14 83.2 211 32.7
EL10Ac8g18817 Beta vulgaris HOM05D000320 ORTHO05D000532 3.0e-14 82.8 203 35.5
CSS0045374 Camellia sinensis var. sinensis HOM05D000320 ORTHO05D000532 5.1e-14 82.0 208 36.5
ClCG06G012040 Citrullus lanatus HOM05D000320 ORTHO05D000532 5.1e-14 82.0 206 36.4
Ciclev10007243m.g Citrus clementina HOM05D000320 ORTHO05D000532 5.1e-14 82.0 216 33.8
TPR.G22806 Trifolium pratense HOM05D000320 ORTHO05D000532 5.1e-14 82.0 176 33.5
Sabra06G0146100 Salix brachista HOM05D000320 ORTHO05D000532 6.7e-14 81.6 216 33.8
TWI34G0451 Tripterygium wilfordii HOM05D000320 ORTHO05D000532 6.7e-14 81.6 215 34.0
vmacro06106 Vaccinium macrocarpon HOM05D000320 ORTHO05D000532 1.1e-13 80.9 202 35.1
vmacro23408 Vaccinium macrocarpon HOM05D000320 ORTHO05D000532 1.1e-13 80.9 202 35.1
CSS0041379 Camellia sinensis var. sinensis HOM05D000320 ORTHO05D000532 1.5e-13 80.5 208 36.1
AUR62041450 Chenopodium quinoa HOM05D000320 ORTHO05D000532 2.6e-13 79.7 186 38.7
MD15G1159900 Malus domestica HOM05D000320 ORTHO05D000532 2.6e-13 79.7 215 34.0
Phvul.009G209700 Phaseolus vulgaris HOM05D000320 ORTHO05D000532 3.3e-13 79.3 212 32.1
Glyma.15G202000 Glycine max HOM05D000320 ORTHO05D000532 4.4e-13 79.0 213 33.3
SGA_v2.0_scaffold183G39868 Striga asiatica HOM05D000320 ORTHO05D000532 4.4e-13 79.0 195 34.4
Potri.018G114300 Populus trichocarpa HOM05D000320 ORTHO05D000532 5.7e-13 78.6 219 33.3
arahy.Tifrunner.gnm1.ann1.D0IPBT Arachis hypogaea HOM05D000320 ORTHO05D000532 7.4e-13 78.2 60 68.3
AUR62011256 Chenopodium quinoa HOM05D000320 ORTHO05D000532 7.4e-13 78.2 187 38.0
Cc00_g14930 Coffea canephora HOM05D000320 ORTHO05D000532 7.4e-13 78.2 215 34.4
Lj4g0019744 Lotus japonicus HOM05D000320 ORTHO05D000532 1.3e-12 77.4 215 36.7
MD02G1013000 Malus domestica HOM05D000320 ORTHO05D000532 1.3e-12 77.4 205 34.1
DCAR_014924 Daucus carota HOM05D000320 ORTHO05D000532 1.7e-12 77.0 197 35.5
Sc08g0005800 Simmondsia chinensis HOM05D000320 ORTHO05D000532 1.7e-12 77.0 202 34.2
THA.LOC104815396 Tarenaya hassleriana HOM05D000320 ORTHO05D000532 1.7e-12 77.0 192 37.0
Lj6g0024742 Lotus japonicus HOM05D000320 ORTHO05D000532 2.2e-12 76.6 209 34.0
Lalb_Chr23g0275831 Lupinus albus HOM05D000320 ORTHO05D000532 2.2e-12 76.6 210 35.2
TPR.G15811 Trifolium pratense HOM05D000320 ORTHO05D000532 2.8e-12 76.3 214 36.4
VMungo1309G3062 Vigna mungo HOM05D000320 ORTHO05D000532 2.8e-12 76.3 218 31.7
Ca_27063_v3 Cicer arietinum L. HOM05D000320 ORTHO05D000532 3.7e-12 75.9 218 31.2
Ca_29981_v3 Cicer arietinum L. HOM05D000320 ORTHO05D000532 3.7e-12 75.9 218 31.2
Lj7P448T12 Lonicera japonica HOM05D000320 ORTHO05D019108 3.7e-12 75.9 203 38.4
Sed0011317 Sechium edule HOM05D000320 ORTHO05D000532 3.7e-12 75.9 203 36.9
MELO3C010263.2 Cucumis melo HOM05D000320 ORTHO05D000532 8.2e-12 74.7 206 35.9
Medtr2g461180 Medicago truncatula HOM05D000320 ORTHO05D000532 8.2e-12 74.7 218 32.1
Sabra18G0097200 Salix brachista HOM05D000320 ORTHO05D000532 1.1e-11 74.3 219 32.9
MBI15_g09584_MAGBIO Magnolia biondii HOM05D000320 ORTHO05D000532 1.4e-11 73.9 61 62.3
Potri.006G190200 Populus trichocarpa HOM05D000320 ORTHO05D000532 1.8e-11 73.6 214 31.8
MSTRG.26317 Avicennia marina HOM05D000320 ORTHO05D000532 2.4e-11 73.2 110 43.6
Lalb_Chr11g0072921 Lupinus albus HOM05D000320 ORTHO05D000532 2.4e-11 73.2 204 32.4
unitig_72.g29746 Utricularia gibba HOM05D000320 ORTHO05D019108 2.4e-11 73.2 181 32.6
CsaV3_1G028500 Cucumis sativus L. HOM05D000320 ORTHO05D000532 4.1e-11 72.4 206 35.4
FAN23G0389 Fragaria x ananassa HOM05D000320 ORTHO05D000532 4.1e-11 72.4 187 34.8
FAN26G1582 Fragaria x ananassa HOM05D000320 ORTHO05D000532 4.1e-11 72.4 186 34.9
FAN28G2483 Fragaria x ananassa HOM05D000320 ORTHO05D000532 5.3e-11 72.0 190 36.3
Lalb_Chr07g0179491 Lupinus albus HOM05D000320 ORTHO05D000532 7.0e-11 71.6 207 33.8
Migut.K01231 Erythranthe guttata HOM05D000320 ORTHO05D019108 1.2e-10 70.9 176 35.2
Migut.K01258 Erythranthe guttata HOM05D000320 ORTHO05D019108 1.2e-10 70.9 176 35.2
Ca_21614_v3 Cicer arietinum L. HOM05D000320 ORTHO05D000532 1.6e-10 70.5 184 34.8
Glyma.17G105100 Glycine max HOM05D000320 ORTHO05D000532 1.6e-10 70.5 201 35.8
FAN19G1966 Fragaria x ananassa HOM05D000320 ORTHO05D000532 3.5e-10 69.3 187 33.7
arahy.Tifrunner.gnm1.ann1.EDM9PE Arachis hypogaea HOM05D000320 ORTHO05D000532 4.5e-10 68.9 166 36.1
CARHR155560 Cardamine hirsuta HOM05D000320 ORTHO05D000532 4.5e-10 68.9 177 36.7
Psat4g033080 Pisum sativum HOM05D000320 ORTHO05D000532 4.5e-10 68.9 166 36.7
Migut.K00378 Erythranthe guttata HOM05D000320 ORTHO05D000532 7.7e-10 68.2 177 34.5
FvH4_1g01730 Fragaria vesca HOM05D000320 ORTHO05D000532 7.7e-10 68.2 187 33.2
PSO017G5451 Papaver somniferum HOM05D000320 ORTHO05D000532 1.0e-09 67.8 154 37.7
Aqoxy7G03535 Aquilegia oxysepala HOM05D000320 ORTHO05D000532 1.7e-09 67.0 216 31.5
Lj7C450G4 Lonicera japonica HOM05D000320 ORTHO05D000532 2.2e-09 66.6 209 34.4
Ah.14g078750 Amaranthus hybridus HOM05D000320 ORTHO05D000532 2.9e-09 66.2 198 31.3
Eucgr.C00439 Eucalyptus grandis HOM05D000320 ORTHO05D000532 6.5e-09 65.1 176 31.8
ATR0629G085 Amborella trichopoda HOM05D000320 ORTHO05D000532 1.5e-08 63.9 54 59.3
PSO478G0422 Papaver somniferum HOM05D000320 ORTHO05D000532 1.5e-08 63.9 153 35.3
Medtr4g116520 Medicago truncatula HOM05D000320 ORTHO05D000532 2.5e-08 63.2 102 46.1
DCAR_008868 Daucus carota HOM05D000320 ORTHO05D000532 3.2e-08 62.8 207 30.0
Aa31sc130G40 Aethionema arabicum HOM05D000320 ORTHO05D000532 4.2e-08 62.4 207 30.9
HPP92_020076 Vanilla planifolia HOM05D000320 ORTHO05D000532 1.6e-07 60.5 59 55.9


User provided reference genes

Program Settings