Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 3.4e-58 228.0 107 100.0
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 3.6e-44 181.4 104 79.8
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 2.2e-41 172.2 104 77.9
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 8.4e-41 170.2 104 76.0
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 1.1e-40 169.9 104 76.9
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 1.1e-40 169.9 105 74.3
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 1.4e-40 169.5 106 73.6
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 1.4e-40 169.5 99 75.8
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 5.4e-40 167.5 104 74.0
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 5.4e-40 167.5 99 73.7
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 2.7e-39 165.2 99 73.7
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 3.5e-39 164.9 104 69.2
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 6.0e-39 164.1 105 73.3
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 7.8e-39 163.7 105 71.4
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 7.8e-39 163.7 93 77.4
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 1.0e-38 163.3 105 70.5
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 1.0e-38 163.3 104 73.1
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 1.3e-38 162.9 104 66.3
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 1.3e-38 162.9 92 75.0
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 1.7e-38 162.5 105 70.5
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 1.7e-38 162.5 105 72.4
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 3.0e-38 161.8 104 71.2
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 3.9e-38 161.4 101 68.3
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 5.1e-38 161.0 103 69.9
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 5.1e-38 161.0 92 73.9
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 5.1e-38 161.0 104 70.2
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 8.6e-38 160.2 105 71.4
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 1.1e-37 159.8 124 63.7
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 1.5e-37 159.5 93 74.2
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 4.3e-37 157.9 110 65.5
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 4.3e-37 157.9 98 68.4
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 5.6e-37 157.5 105 69.5
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 5.6e-37 157.5 106 70.8
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 7.3e-37 157.1 105 71.4
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 9.6e-37 156.8 107 67.3
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 1.2e-36 156.4 105 70.5
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 1.6e-36 156.0 92 72.8
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 1.6e-36 156.0 93 72.0
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.6e-36 156.0 105 69.5
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 2.8e-36 155.2 93 72.0
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 2.8e-36 155.2 103 68.0
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 3.6e-36 154.8 92 73.9
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 4.7e-36 154.5 103 67.0
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 6.2e-36 154.1 103 69.9
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 8.1e-36 153.7 104 69.2
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 1.4e-35 152.9 92 69.6
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 3.1e-35 151.8 106 63.2
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 3.1e-35 151.8 106 66.0
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 6.9e-35 150.6 103 67.0
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 1.2e-34 149.8 89 71.9
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 2.0e-34 149.1 103 62.1
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 5.8e-34 147.5 103 66.0
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 7.6e-34 147.1 93 66.7
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.3e-33 146.4 103 66.0
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 1.3e-33 146.4 103 66.0
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 2.2e-33 145.6 111 64.9
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 2.2e-33 145.6 92 68.5
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 2.2e-33 145.6 104 64.4
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 2.2e-33 145.6 95 67.4
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 6.4e-33 144.1 76 85.5
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 1.1e-32 143.3 98 66.3
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 1.1e-32 143.3 103 64.1
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 2.4e-32 142.1 104 65.4
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 3.2e-32 141.7 104 62.5
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 4.2e-32 141.4 95 66.3
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 5.4e-32 141.0 105 62.9
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 9.3e-32 140.2 103 64.1
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 9.3e-32 140.2 103 64.1
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 1.2e-31 139.8 101 61.4
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.7e-31 138.7 103 63.1
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 3.9e-30 134.8 75 80.0
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 6.6e-30 134.0 91 67.0
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 6.6e-30 134.0 105 58.1
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 6.6e-30 134.0 105 58.1
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 1.1e-29 133.3 106 59.4
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 1.1e-29 133.3 80 75.0
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 1.9e-29 132.5 106 60.4
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 2.5e-29 132.1 106 59.4
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 2.5e-29 132.1 90 61.1
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 3.3e-29 131.7 106 60.4
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 4.3e-29 131.3 106 60.4
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 4.3e-29 131.3 103 61.2
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 5.6e-29 131.0 107 58.9
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 7.3e-29 130.6 106 59.4
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 9.6e-29 130.2 106 59.4
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 1.3e-28 129.8 94 56.4
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.8e-28 128.6 104 57.7
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 2.8e-28 128.6 104 59.6
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 3.6e-28 128.3 93 63.4
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 8.1e-28 127.1 94 60.6
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 8.1e-28 127.1 76 75.0
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 1.1e-27 126.7 171 40.4
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 2.4e-27 125.6 94 60.6
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 6.9e-27 124.0 89 61.8
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 9.0e-27 123.6 76 73.7
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 1.2e-26 123.2 123 51.2
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.2e-26 123.2 74 73.0
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 2.0e-26 122.5 125 51.2
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 2.0e-26 122.5 123 52.0
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 2.0e-26 122.5 85 61.2
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 2.6e-26 122.1 75 68.0
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 3.4e-26 121.7 135 46.7
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 4.5e-26 121.3 123 51.2
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 4.5e-26 121.3 123 51.2
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 1.7e-25 119.4 90 57.8
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 3.8e-25 118.2 128 48.4
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 6.4e-25 117.5 70 72.9
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 1.9e-24 115.9 76 67.1
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 3.2e-24 115.2 92 52.2
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 3.2e-24 115.2 111 50.5
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 7.1e-24 114.0 98 50.0
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 3.5e-23 111.7 71 71.8
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 6.0e-23 110.9 71 73.2
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 1.3e-22 109.8 71 70.4
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 3.9e-22 108.2 69 65.2
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 1.1e-21 106.7 71 64.8
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 4.8e-20 101.3 55 76.4
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 9.9e-18 93.6 77 55.8
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 2.2e-17 92.4 74 59.5
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 4.9e-17 91.3 123 43.1
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 5.5e-16 87.8 87 44.8
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 2.7e-15 85.5 81 55.6
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 3.5e-15 85.1 59 66.1
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 5.6e-13 77.8 40 75.0
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 1.3e-12 76.6 40 82.5
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 9.0e-11 70.5 88 34.1
CDE11G0759 Ceratophyllum demersum HOM05D006227 ORTHO05D129109 9.3e-08 60.5 53 50.9
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 2.1e-07 59.3 37 64.9
RcHm_v2.0_Chr4g0411551 Rosa chinensis HOM05D000001 ORTHO05D000003 3.0e-06 55.5 61 49.2


User provided reference genes

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