Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G2131 Erigeron canadensis HOM05D002831 ORTHO05D004341 2.8e-99 365.5 221 100.0
HanXRQChr14g0462531 Helianthus annuus HOM05D002831 ORTHO05D004341 3.7e-59 232.3 199 78.4
Dinv35249 Davidia involucrata HOM05D002831 ORTHO05D004341 1.7e-35 153.7 228 50.9
Lsat_1_v5_gn_2_131301 Lactuca sativa HOM05D002831 ORTHO05D004341 1.3e-27 127.5 206 59.7
Actinidia34155 Actinidia chinensis HOM05D002831 ORTHO05D004341 4.9e-27 125.6 209 49.8
ECA232G1618 Erigeron canadensis HOM05D002831 ORTHO05D004341 1.9e-26 123.6 196 56.1
Hma1.2p1_0274F.1_g110180 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 2.4e-26 123.2 243 49.0
Actinidia08576 Actinidia chinensis HOM05D002831 ORTHO05D004341 6.0e-25 118.6 206 48.5
Lj1P1004T73 Lonicera japonica HOM05D002831 ORTHO05D004341 2.5e-23 113.2 209 41.1
Cfa016283 Carpinus fangiana HOM05D002831 ORTHO05D004341 1.6e-22 110.5 250 48.8
Oeu045362.1 Olea europaea HOM05D002831 ORTHO05D004341 2.8e-22 109.8 251 42.2
CSS0012099 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 3.6e-22 109.4 209 43.5
CSS0034926 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 3.6e-22 109.4 209 43.5
Migut.F00296 Erythranthe guttata HOM05D002831 ORTHO05D004341 3.6e-22 109.4 244 41.0
Rhsim03G0190700 Rhododendron simsii HOM05D002831 ORTHO05D004341 6.2e-22 108.6 242 40.1
Dinv28390 Davidia involucrata HOM05D002831 ORTHO05D004341 1.1e-21 107.8 209 44.0
RcHm_v2.0_Chr1g0378241 Rosa chinensis HOM05D002831 ORTHO05D004341 1.1e-21 107.8 238 50.8
vmacro06629 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 3.1e-21 106.3 251 38.6
Sabra17G0120100 Salix brachista HOM05D002831 ORTHO05D004341 1.2e-20 104.4 246 41.5
Sabra04G0053100 Salix brachista HOM05D002831 ORTHO05D004341 5.8e-20 102.1 255 38.8
Manes.14G023000 Manihot esculenta HOM05D002831 ORTHO05D004341 9.8e-20 101.3 207 52.7
Cc02_g02420 Coffea canephora HOM05D002831 ORTHO05D004341 2.9e-19 99.8 212 44.3
Nitab4.5_0000084g0400 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.1e-18 97.8 214 43.0
CSS0004722 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 1.4e-18 97.4 209 39.2
CSS0021117 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 1.4e-18 97.4 209 39.2
Hma1.2p1_0327F.1_g126410 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 1.4e-18 97.4 239 49.8
DCAR_020268 Daucus carota HOM05D002831 ORTHO05D004341 1.9e-18 97.1 210 37.1
Thecc.03G183700 Theobroma cacao HOM05D002831 ORTHO05D004341 2.4e-18 96.7 211 42.2
Nitab4.5_0000572g0140 Nicotiana tabacum HOM05D002831 ORTHO05D004341 5.4e-18 95.5 214 41.1
FAN03G0359 Fragaria x ananassa HOM05D002831 ORTHO05D004341 9.2e-18 94.7 256 46.9
Peaxi162Scf00618g00748 Petunia axillaris HOM05D001680 ORTHO05D004341 1.2e-17 94.4 210 41.4
CiPaw.06G003300 Carya illinoinensis HOM05D002831 ORTHO05D004341 1.6e-17 94.0 211 53.6
arahy.Tifrunner.gnm1.ann1.VWVY78 Arachis hypogaea HOM05D002831 ORTHO05D010484 4.6e-17 92.4 255 42.4
GSVIVG01028866001 Vitis vinifera HOM05D002831 ORTHO05D010484 4.6e-17 92.4 264 47.0
PGSC0003DMG400028898 Solanum tuberosum HOM05D002831 ORTHO05D004341 1.0e-16 91.3 208 43.3
Duzib068G1050 Durio zibethinus HOM05D002831 ORTHO05D004341 1.3e-16 90.9 210 40.0
FAN01G0089 Fragaria x ananassa HOM05D002831 ORTHO05D004341 1.3e-16 90.9 256 46.1
COL.COLO4_10060 Corchorus olitorius HOM05D002831 ORTHO05D004341 1.7e-16 90.5 211 40.3
CiPaw.06G003100 Carya illinoinensis HOM05D002831 ORTHO05D004341 3.0e-16 89.7 211 53.6
Sopen06g012030 Solanum pennellii HOM05D002831 ORTHO05D004341 3.9e-16 89.4 208 42.8
Duzib084G1013 Durio zibethinus HOM05D002831 ORTHO05D004341 5.1e-16 89.0 210 41.4
Rhsim09G0200400 Rhododendron simsii HOM05D002831 ORTHO05D004341 5.1e-16 89.0 207 41.5
SalBow4G1512 Salvia bowleyana HOM05D002831 ORTHO05D004341 5.1e-16 89.0 209 43.1
DCAR_009393 Daucus carota HOM05D002831 ORTHO05D004341 6.6e-16 88.6 208 40.4
FAN06G3328 Fragaria x ananassa HOM05D002831 ORTHO05D004341 8.6e-16 88.2 256 46.1
TAR374G0609 Trochodendron aralioides HOM05D002831 ORTHO05D004341 8.6e-16 88.2 207 43.0
CAN.G126.12 Capsicum annuum HOM05D002831 ORTHO05D004341 1.1e-15 87.8 217 39.2
MSTRG.74 Avicennia marina HOM05D002831 ORTHO05D004341 1.5e-15 87.4 217 38.7
Lsat_1_v5_gn_9_56481 Lactuca sativa HOM05D002831 ORTHO05D004341 1.5e-15 87.4 196 50.0
Nitab4.5_0003825g0080 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.5e-15 87.4 206 42.2
Peaxi162Scf00444g00016 Petunia axillaris HOM05D002831 ORTHO05D004341 1.9e-15 87.0 218 42.7
Migut.F01087 Erythranthe guttata HOM05D002831 ORTHO05D004341 2.5e-15 86.7 233 37.8
Manes.06G152100 Manihot esculenta HOM05D002831 ORTHO05D004341 2.5e-15 86.7 206 48.5
Cpa.g.sc107.104 Carica papaya HOM05D002831 ORTHO05D004341 3.3e-15 86.3 211 40.8
SGA_v2.0_scaffold60G21104 Striga asiatica HOM05D002831 ORTHO05D004341 5.6e-15 85.5 253 36.4
TAR375G0840 Trochodendron aralioides HOM05D002831 ORTHO05D004341 7.3e-15 85.1 210 52.4
Oeu036905.1 Olea europaea HOM05D002831 ORTHO05D004341 1.2e-14 84.3 214 39.7
Potri.004G079900 Populus trichocarpa HOM05D002831 ORTHO05D004341 2.1e-14 83.6 210 40.5
Eucgr.A02748 Eucalyptus grandis HOM05D002831 ORTHO05D004341 2.8e-14 83.2 207 38.2
Atru.chr1.379 Acer truncatum HOM05D002831 ORTHO05D004341 3.6e-14 82.8 209 41.6
Atru.ctg97_1.16 Acer truncatum HOM05D002831 ORTHO05D004341 3.6e-14 82.8 209 41.6
VMungo0464G0591 Vigna mungo HOM05D002831 ORTHO05D004341 3.6e-14 82.8 253 42.3
THA.LOC104800271 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 6.2e-14 82.0 195 35.9
TWI23G0387 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 8.1e-14 81.6 222 32.9
Sopen03g003930 Solanum pennellii HOM05D002831 ORTHO05D004341 1.1e-13 81.3 206 39.3
PGSC0003DMG400010167 Solanum tuberosum HOM05D002831 ORTHO05D004341 1.1e-13 81.3 206 40.3
Ciclev10005857m.g Citrus clementina HOM05D002831 ORTHO05D004341 1.8e-13 80.5 209 39.2
PSO478G4817 Papaver somniferum HOM05D002831 ORTHO05D004341 2.3e-13 80.1 205 35.1
Potri.017G143215 Populus trichocarpa HOM05D002831 ORTHO05D004341 2.3e-13 80.1 209 39.7
QL09p012962 Quercus lobata HOM05D002831 ORTHO05D004341 2.3e-13 80.1 210 50.5
Haze_00039 Corylus avellana HOM05D002831 ORTHO05D004341 5.2e-13 79.0 152 39.5
Duzib205G1365 Durio zibethinus HOM05D002831 ORTHO05D004341 5.2e-13 79.0 208 39.9
Gohir.A12G255500 Gossypium hirsutum HOM05D002831 ORTHO05D004341 5.2e-13 79.0 212 38.2
PSO782G2858 Papaver somniferum HOM05D002831 ORTHO05D004341 5.2e-13 79.0 206 34.5
Gohir.D12G256900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 6.8e-13 78.6 212 38.7
Gorai.008G275100 Gossypium raimondii HOM05D002831 ORTHO05D004341 6.8e-13 78.6 212 38.7
SGA_v2.0_scaffold113G31691 Striga asiatica HOM05D002831 ORTHO05D008967 6.8e-13 78.6 210 39.5
Actinidia31838 Actinidia chinensis HOM05D002831 ORTHO05D004341 1.5e-12 77.4 204 38.2
Nitab4.5_0000248g0010 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.5e-12 77.4 241 36.5
CiPaw.12G018300 Carya illinoinensis HOM05D002831 ORTHO05D004341 2.6e-12 76.6 153 41.2
CANSAT11G0421 Cannabis sativa HOM05D002831 ORTHO05D004341 3.4e-12 76.3 210 50.0
Gorai.004G117400 Gossypium raimondii HOM05D002831 ORTHO05D004341 3.4e-12 76.3 245 36.3
Oeu060465.1 Olea europaea HOM05D002831 ORTHO05D004341 3.4e-12 76.3 194 36.1
unitig_37.g11969 Utricularia gibba HOM05D002831 ORTHO05D004341 4.4e-12 75.9 208 36.5
MSTRG.27090 Avicennia marina HOM05D002831 ORTHO05D004341 9.9e-12 74.7 216 39.8
Prupe.2G300400 Prunus persica HOM05D002831 ORTHO05D004341 9.9e-12 74.7 208 46.6
TPR.G7753 Trifolium pratense HOM05D002831 ORTHO05D004341 9.9e-12 74.7 149 51.0
vmacro09817 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 2.9e-11 73.2 179 43.6
MSTRG.8713 Avicennia marina HOM05D002831 ORTHO05D004341 3.8e-11 72.8 209 49.3
TWI14G0525 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 3.8e-11 72.8 213 34.7
Gohir.A09G182600 Gossypium hirsutum HOM05D002831 ORTHO05D004341 6.4e-11 72.0 211 39.3
Solyc06g036250.2 Solanum lycopersicum HOM05D002831 ORTHO05D004341 6.4e-11 72.0 150 38.0
Gorai.006G199200 Gossypium raimondii HOM05D002831 ORTHO05D004341 2.4e-10 70.1 211 37.0
FAN03G0781 Fragaria x ananassa HOM05D002831 ORTHO05D004341 3.2e-10 69.7 209 48.3
Gorai.007G012600 Gossypium raimondii HOM05D002831 ORTHO05D004341 3.2e-10 69.7 205 37.1
Gohir.D09G177200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 4.1e-10 69.3 211 37.4
EL10Ac3g05428 Beta vulgaris HOM05D002831 ORTHO05D004341 5.4e-10 68.9 195 35.4
Lalb_Chr03g0034811 Lupinus albus HOM05D002831 ORTHO05D004341 5.4e-10 68.9 191 48.7
Sp7g23710 Schrenkiella parvula HOM05D002831 ORTHO05D004341 5.4e-10 68.9 197 33.5
TWI39G0102 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 7.1e-10 68.6 202 33.7
VMungo0720G1018 Vigna mungo HOM05D002831 ORTHO05D004341 7.1e-10 68.6 236 43.6
FAN10G3196 Fragaria x ananassa HOM05D002831 ORTHO05D004341 9.2e-10 68.2 209 48.8
Gohir.A11G011900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.2e-09 67.8 207 36.7
Ah.07g206590 Amaranthus hybridus HOM05D002831 ORTHO05D004341 1.6e-09 67.4 245 29.8
Aqoxy7G00243 Aquilegia oxysepala HOM05D002831 ORTHO05D004341 1.6e-09 67.4 207 40.1
Phvul.004G109000 Phaseolus vulgaris HOM05D002831 ORTHO05D004341 1.6e-09 67.4 195 47.2
Gohir.D11G011100 Gossypium hirsutum HOM05D002831 ORTHO05D004341 2.7e-09 66.6 205 36.1
AUR62021127 Chenopodium quinoa HOM05D002831 ORTHO05D004341 4.6e-09 65.9 205 29.8
AUR62031417 Chenopodium quinoa HOM05D002831 ORTHO05D004341 4.6e-09 65.9 205 29.8
FvH4_7g30190 Fragaria vesca HOM05D002831 ORTHO05D004341 7.8e-09 65.1 209 47.8
AT4G25670 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 1.0e-08 64.7 194 34.0
AL7G27390 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 1.3e-08 64.3 207 32.9
Thhalv10027473m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 1.3e-08 64.3 195 33.8
Glyma.16G179300 Glycine max HOM05D002831 ORTHO05D004341 1.3e-08 64.3 195 46.7
Ah.13g069150 Amaranthus hybridus HOM05D002831 ORTHO05D004341 1.7e-08 63.9 198 30.3
CARHR233110 Cardamine hirsuta HOM05D002831 ORTHO05D004341 1.7e-08 63.9 207 33.8
ClCG05G008340 Citrullus lanatus HOM05D002831 ORTHO05D004341 1.7e-08 63.9 210 48.1
CsaV3_3G017430 Cucumis sativus L. HOM05D002831 ORTHO05D004341 1.7e-08 63.9 208 48.1
MD07G1278500 Malus domestica HOM05D002831 ORTHO05D004341 2.3e-08 63.5 212 47.2
Carub.0007s1530 Capsella rubella HOM05D002831 ORTHO05D004341 3.9e-08 62.8 203 32.5
Gohir.D08G109800 Gossypium hirsutum HOM05D002831 ORTHO05D004341 3.9e-08 62.8 189 39.2
Gohir.A08G098200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 6.6e-08 62.0 190 38.4
MELO3C006940.2 Cucumis melo HOM05D002831 ORTHO05D004341 8.6e-08 61.6 213 46.9
AL7G27410 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 1.9e-07 60.5 197 32.5
MBI11_g04751_MAGBIO Magnolia biondii HOM05D002831 ORTHO05D004341 1.9e-07 60.5 183 46.4
MD01G1207900 Malus domestica HOM05D002831 ORTHO05D004341 2.5e-07 60.1 217 46.5
Sp7g23730 Schrenkiella parvula HOM05D002831 ORTHO05D004341 2.5e-07 60.1 201 33.3
AL8G27020 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 3.3e-07 59.7 196 30.6
BolC1t02049H Brassica oleracea HOM05D002831 ORTHO05D004341 3.3e-07 59.7 194 37.6
BcaC06g32789 Brassica carinata HOM05D002831 ORTHO05D004341 4.3e-07 59.3 206 30.6
Carub.0008s1268 Capsella rubella HOM05D002831 ORTHO05D004341 4.3e-07 59.3 194 31.4
BcaNung07307 Brassica carinata HOM05D002831 ORTHO05D004341 5.6e-07 58.9 226 29.6
AT4G25690 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 7.3e-07 58.5 199 31.7
Glyma.09G132500 Glycine max HOM05D002831 ORTHO05D004341 9.6e-07 58.2 193 36.8
Thhalv10026278m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 1.6e-06 57.4 196 29.1
Sc19g0001290 Simmondsia chinensis HOM05D002831 ORTHO05D004341 1.6e-06 57.4 188 37.2
unitig_0.g2470 Utricularia gibba HOM05D002831 ORTHO05D004341 2.8e-06 56.6 199 31.2
Psat6g196360 Pisum sativum HOM05D002831 ORTHO05D004341 3.6e-06 56.2 178 46.1
BraA01t01648Z Brassica rapa HOM05D002831 ORTHO05D004341 4.7e-06 55.8 194 32.0
PGR042G3073 Punica granatum HOM05D002831 ORTHO05D004341 4.7e-06 55.8 210 34.8
Zm00001eb229390 Zea mays HOM05D002831 ORTHO05D004341 4.7e-06 55.8 214 43.9
ATR0661G020 Amborella trichopoda HOM05D002831 ORTHO05D004341 6.2e-06 55.5 177 31.6
AT5G52550 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 8.1e-06 55.1 196 29.1


User provided reference genes

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