Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G2090 Erigeron canadensis HOM05D003903 ORTHO05D004828 1.2e-266 922.5 456 100.0
Lsat_1_v5_gn_2_121400 Lactuca sativa HOM05D003903 ORTHO05D004828 1.1e-198 696.8 455 74.3
HanXRQChr07g0202521 Helianthus annuus HOM05D003903 ORTHO05D004828 2.9e-183 645.6 448 70.1
Nitab4.5_0001346g0020 Nicotiana tabacum HOM05D003903 ORTHO05D004828 2.0e-160 569.7 438 63.9
Cc02_g06790 Coffea canephora HOM05D003903 ORTHO05D004828 3.4e-160 568.9 456 61.4
Hma1.2p1_1409F.1_g281590 Hydrangea macrophylla HOM05D003903 ORTHO05D004828 7.7e-160 567.8 454 61.9
Gohir.A10G233600 Gossypium hirsutum HOM05D003903 ORTHO05D004828 1.3e-159 567.0 452 63.1
Gorai.011G283600 Gossypium raimondii HOM05D003903 ORTHO05D004828 1.7e-159 566.6 453 62.7
Nitab4.5_0000802g0150 Nicotiana tabacum HOM05D003903 ORTHO05D004828 2.2e-159 566.2 458 62.2
ClCG11G006280 Citrullus lanatus HOM05D003903 ORTHO05D004828 1.4e-158 563.5 423 64.3
COL.COLO4_25636 Corchorus olitorius HOM05D003903 ORTHO05D004828 1.9e-158 563.1 463 60.9
Aqoxy4G02628 Aquilegia oxysepala HOM05D003903 ORTHO05D004828 4.2e-158 562.0 455 59.6
Gohir.D10G245900 Gossypium hirsutum HOM05D003903 ORTHO05D004828 4.2e-158 562.0 453 62.3
Duzib128G1594 Durio zibethinus HOM05D003903 ORTHO05D004828 7.2e-158 561.2 463 62.0
Ciclev10031447m.g Citrus clementina HOM05D003903 ORTHO05D004828 3.6e-157 558.9 457 61.9
Lj8C71T1 Lonicera japonica HOM05D003903 ORTHO05D004828 4.6e-157 558.5 445 63.1
Duzib114G0607 Durio zibethinus HOM05D003903 ORTHO05D004828 6.1e-157 558.1 437 63.4
Manes.07G126900 Manihot esculenta HOM05D003903 ORTHO05D004828 6.1e-157 558.1 466 59.9
Cpa.g.sc19.206 Carica papaya HOM05D003903 ORTHO05D004828 1.8e-156 556.6 451 59.0
CsaV3_6G001690 Cucumis sativus L. HOM05D003903 ORTHO05D004828 1.8e-156 556.6 423 62.9
Lj1P952T30 Lonicera japonica HOM05D003903 ORTHO05D004828 3.0e-156 555.8 450 60.7
Peaxi162Scf01313g00013 Petunia axillaris HOM05D003903 ORTHO05D004828 3.0e-156 555.8 453 61.8
Manes.10G016200 Manihot esculenta HOM05D003903 ORTHO05D004828 5.1e-156 555.1 465 60.6
Sed0011279 Sechium edule HOM05D003903 ORTHO05D004828 6.7e-156 554.7 437 61.6
Actinidia29686 Actinidia chinensis HOM05D003903 ORTHO05D004828 1.1e-155 553.9 436 62.4
Sed0004569 Sechium edule HOM05D003903 ORTHO05D004828 2.0e-155 553.1 421 62.0
Thecc.10G023200 Theobroma cacao HOM05D003903 ORTHO05D004828 4.4e-155 552.0 437 60.9
Gohir.D05G302900 Gossypium hirsutum HOM05D003903 ORTHO05D004828 7.4e-155 551.2 462 60.0
CiPaw.02G190900 Carya illinoinensis HOM05D003903 ORTHO05D004828 1.3e-154 550.4 460 59.6
Gohir.A05G303900 Gossypium hirsutum HOM05D003903 ORTHO05D004828 1.7e-154 550.1 462 60.0
Gorai.009G322100 Gossypium raimondii HOM05D003903 ORTHO05D004828 3.7e-154 548.9 462 59.7
Gohir.A13G016200 Gossypium hirsutum HOM05D003903 ORTHO05D004828 4.8e-154 548.5 423 63.4
TAR633G2671 Trochodendron aralioides HOM05D003903 ORTHO05D004828 4.8e-154 548.5 437 61.6
CANSAT56G3936 Cannabis sativa HOM05D003903 ORTHO05D004828 6.3e-154 548.1 450 60.0
Haze_17196 Corylus avellana HOM05D003903 ORTHO05D004828 8.2e-154 547.7 454 61.0
Gorai.013G019200 Gossypium raimondii HOM05D003903 ORTHO05D004828 1.1e-153 547.4 423 62.9
Prupe.2G247600 Prunus persica HOM05D003903 ORTHO05D004828 2.4e-153 546.2 428 62.1
Rhsim03G0141400 Rhododendron simsii HOM05D003903 ORTHO05D004828 4.1e-153 545.4 455 59.3
Gohir.D13G017300 Gossypium hirsutum HOM05D003903 ORTHO05D004828 6.9e-153 544.7 423 62.6
Nn2g11424 Nelumbo nucifera HOM05D003903 ORTHO05D004828 2.0e-152 543.1 449 59.5
CiPaw.01G296700 Carya illinoinensis HOM05D003903 ORTHO05D004828 4.5e-152 542.0 455 59.8
MD01G1148800 Malus domestica HOM05D003903 ORTHO05D004828 5.9e-152 541.6 430 61.9
Potri.010G191300 Populus trichocarpa HOM05D003903 ORTHO05D004828 3.8e-151 538.9 464 58.0
Cfa001353 Carpinus fangiana HOM05D003903 ORTHO05D004828 6.5e-151 538.1 455 59.8
TWI53G1511 Tripterygium wilfordii HOM05D003903 ORTHO05D004828 8.5e-151 537.7 463 58.1
TWI73G0235 Tripterygium wilfordii HOM05D003903 ORTHO05D004828 8.5e-151 537.7 458 58.3
MD07G1215700 Malus domestica HOM05D003903 ORTHO05D004828 1.1e-150 537.3 465 58.1
Sabra10G0147300 Salix brachista HOM05D003903 ORTHO05D004828 1.4e-150 537.0 457 58.4
PSO339G1420 Papaver somniferum HOM05D003903 ORTHO05D004828 1.9e-150 536.6 428 60.0
Sabra08G0048400 Salix brachista HOM05D003903 ORTHO05D004828 1.9e-150 536.6 458 58.7
Potri.008G066000 Populus trichocarpa HOM05D003903 ORTHO05D004828 2.1e-149 533.1 455 58.2
MSTRG.27342 Avicennia marina HOM05D003903 ORTHO05D004828 6.1e-149 531.6 431 58.9
Migut.F00698 Erythranthe guttata HOM05D003903 ORTHO05D004828 1.0e-148 530.8 449 57.7
FAN03G2393 Fragaria x ananassa HOM05D003903 ORTHO05D004828 1.4e-148 530.4 458 57.2
RcHm_v2.0_Chr1g0369681 Rosa chinensis HOM05D003903 ORTHO05D004828 1.8e-148 530.0 453 57.0
FvH4_7g24150 Fragaria vesca HOM05D003903 ORTHO05D004828 6.7e-148 528.1 458 57.0
Atru.chr12.4 Acer truncatum HOM05D003903 ORTHO05D004828 1.1e-147 527.3 453 58.3
DCAR_011797 Daucus carota HOM05D003903 ORTHO05D004828 1.1e-147 527.3 456 58.3
MSTRG.8967 Avicennia marina HOM05D003903 ORTHO05D004828 2.6e-147 526.2 457 56.0
FAN10G1202 Fragaria x ananassa HOM05D003903 ORTHO05D004828 2.6e-147 526.2 458 57.2
FAN01G2475 Fragaria x ananassa HOM05D003903 ORTHO05D004828 7.4e-147 524.6 454 57.0
FAN06G4939 Fragaria x ananassa HOM05D003903 ORTHO05D004828 9.7e-147 524.2 458 56.6
Sc10g0002230 Simmondsia chinensis HOM05D003903 ORTHO05D004828 1.3e-146 523.9 467 56.7
MELO3C008286.2 Cucumis melo HOM05D003903 ORTHO05D004828 6.3e-146 521.5 419 61.1
GSVIVG01032858001 Vitis vinifera HOM05D003903 ORTHO05D004828 1.6e-144 516.9 455 57.6
AUR62022857 Chenopodium quinoa HOM05D003903 ORTHO05D004828 3.5e-144 515.8 457 56.5
MBI05_g14236_MAGBIO Magnolia biondii HOM05D003903 ORTHO05D004828 1.7e-143 513.5 426 59.2
AUR62012225 Chenopodium quinoa HOM05D003903 ORTHO05D004828 8.5e-143 511.1 458 56.1
CDE07G0538 Ceratophyllum demersum HOM05D003903 ORTHO05D004828 3.2e-142 509.2 423 59.6
Ah.10g036480 Amaranthus hybridus HOM05D003903 ORTHO05D004828 1.2e-141 507.3 458 55.5
MBI14_g09425_MAGBIO Magnolia biondii HOM05D003903 ORTHO05D004828 3.0e-140 502.7 441 57.1
Ah.16g103300 Amaranthus hybridus HOM05D003903 ORTHO05D004828 3.3e-139 499.2 454 55.5
EL10Ac2g04804 Beta vulgaris HOM05D003903 ORTHO05D004828 9.7e-139 497.7 452 54.9
Eucgr.J00236 Eucalyptus grandis HOM05D003903 ORTHO05D004828 6.3e-138 495.0 464 54.3
unitig_37.g12017 Utricularia gibba HOM05D003903 ORTHO05D004828 2.5e-134 483.0 386 58.8
Medtr3g070230 Medicago truncatula HOM05D003903 ORTHO05D004828 2.0e-131 473.4 461 54.0
CDE04G0060 Ceratophyllum demersum HOM05D003903 ORTHO05D004828 7.5e-131 471.5 419 55.4
Psat5g126680 Pisum sativum HOM05D003903 ORTHO05D004828 1.3e-130 470.7 462 52.6
ATR0618G085 Amborella trichopoda HOM05D003903 ORTHO05D004828 2.2e-130 469.9 456 51.1
CDE03G0196 Ceratophyllum demersum HOM05D003903 ORTHO05D004828 2.8e-130 469.5 432 54.2
PGR142G4408 Punica granatum HOM05D003903 ORTHO05D004828 2.8e-130 469.5 430 54.7
CDE04G2684 Ceratophyllum demersum HOM05D003903 ORTHO05D004828 3.7e-130 469.2 406 57.6
Ca_17155_v3 Cicer arietinum L. HOM05D003903 ORTHO05D004828 2.4e-129 466.5 461 52.5
SGA_v2.0_scaffold60G21023 Striga asiatica HOM05D003903 ORTHO05D004828 5.9e-128 461.8 432 52.5
Glyma.11G228100 Glycine max HOM05D003903 ORTHO05D004828 1.3e-127 460.7 461 51.8
Glyma.18G029300 Glycine max HOM05D003903 ORTHO05D004828 2.9e-127 459.5 428 53.3
VMungo1383G2047 Vigna mungo HOM05D003903 ORTHO05D004828 4.2e-126 455.7 452 52.0
PGR044G2033 Punica granatum HOM05D003903 ORTHO05D004828 1.8e-124 450.3 446 52.2
Lj6g0001525 Lotus japonicus HOM05D003903 ORTHO05D004828 2.3e-124 449.9 464 51.3
Sp4g22310 Schrenkiella parvula HOM05D003903 ORTHO05D004828 6.8e-124 448.4 453 51.2
Phvul.001G241300 Phaseolus vulgaris HOM05D003903 ORTHO05D004828 4.4e-123 445.7 456 51.3
THA.LOC104810079 Tarenaya hassleriana HOM05D003903 ORTHO05D004828 9.8e-123 444.5 452 52.2
BcaC01g05448 Brassica carinata HOM05D003903 ORTHO05D004828 4.9e-122 442.2 439 52.4
AT2G40000 Arabidopsis thaliana HOM05D003903 ORTHO05D004828 6.3e-122 441.8 433 52.9
BraA03t11470Z Brassica rapa HOM05D003903 ORTHO05D004828 1.1e-121 441.0 438 52.1
AL4G37600 Arabidopsis lyrata HOM05D003903 ORTHO05D004828 1.4e-121 440.7 433 52.9
BcaB01g03584 Brassica carinata HOM05D003903 ORTHO05D004828 1.4e-121 440.7 438 52.3
A03p22420 Brassica napus HOM05D003903 ORTHO05D004828 4.1e-121 439.1 438 51.8
BolC3t15044H Brassica oleracea HOM05D003903 ORTHO05D004828 9.2e-121 438.0 439 51.9
Aa31LG5G19600 Aethionema arabicum HOM05D003903 ORTHO05D004828 1.2e-120 437.6 457 51.2
C03p26580 Brassica napus HOM05D003903 ORTHO05D004828 1.2e-120 437.6 439 51.7
Dinv20976 Davidia involucrata HOM05D003903 ORTHO05D004828 1.6e-120 437.2 315 67.6
Dinv21029 Davidia involucrata HOM05D003903 ORTHO05D004828 1.6e-120 437.2 315 67.6
CARHR165950 Cardamine hirsuta HOM05D003903 ORTHO05D004828 2.0e-120 436.8 435 52.4
Carub.0004s2214 Capsella rubella HOM05D003903 ORTHO05D004828 2.7e-120 436.4 431 51.7
Thhalv10017972m.g Eutrema salsugineum HOM05D003903 ORTHO05D004828 2.7e-120 436.4 454 50.0
BraA04t18495Z Brassica rapa HOM05D003903 ORTHO05D004828 3.5e-120 436.0 434 51.8
Sp5g06640 Schrenkiella parvula HOM05D003903 ORTHO05D004828 3.5e-120 436.0 435 52.4
arahy.Tifrunner.gnm1.ann1.66PPWS Arachis hypogaea HOM05D003903 ORTHO05D004828 5.9e-120 435.3 438 50.7
AL5G37130 Arabidopsis lyrata HOM05D003903 ORTHO05D004828 1.0e-119 434.5 432 52.3
CARHR134950 Cardamine hirsuta HOM05D003903 ORTHO05D004828 1.0e-119 434.5 454 51.1
Lalb_Chr10g0105071 Lupinus albus HOM05D003903 ORTHO05D004828 3.8e-119 432.6 442 52.0
AT3G55840 Arabidopsis thaliana HOM05D003903 ORTHO05D004828 5.0e-119 432.2 428 52.3
A04p30140 Brassica napus HOM05D003903 ORTHO05D004828 8.6e-119 431.4 434 51.6
BcaB02g09061 Brassica carinata HOM05D003903 ORTHO05D004828 1.9e-118 430.3 450 49.3
C04p67730 Brassica napus HOM05D003903 ORTHO05D004828 2.5e-118 429.9 434 51.2
LjContig00357g0017260 Lotus japonicus HOM05D003903 ORTHO05D004828 2.5e-118 429.9 454 49.3
BolC4t28276H Brassica oleracea HOM05D003903 ORTHO05D004828 4.3e-118 429.1 434 51.4
Carub.0005s2262 Capsella rubella HOM05D003903 ORTHO05D004828 4.3e-118 429.1 440 50.5
THA.LOC104824309 Tarenaya hassleriana HOM05D003903 ORTHO05D004828 2.1e-117 426.8 452 49.8
Psat2g033760 Pisum sativum HOM05D003903 ORTHO05D004828 2.8e-117 426.4 428 50.7
BcaC02g07344 Brassica carinata HOM05D003903 ORTHO05D004828 6.1e-117 425.2 434 51.2
BcaC02g07389 Brassica carinata HOM05D003903 ORTHO05D004828 6.1e-117 425.2 434 51.2
Ca_05946_v3 Cicer arietinum L. HOM05D003903 ORTHO05D004828 8.0e-117 424.9 454 49.1
BraA05t19610Z Brassica rapa HOM05D003903 ORTHO05D004828 1.0e-116 424.5 451 50.8
C04p07470 Brassica napus HOM05D003903 ORTHO05D004828 1.4e-116 424.1 439 51.0
BolC4t22366H Brassica oleracea HOM05D003903 ORTHO05D004828 1.4e-116 424.1 439 51.0
A05p06420 Brassica napus HOM05D003903 ORTHO05D004828 3.0e-116 422.9 451 51.2
A09p48830 Brassica napus HOM05D003903 ORTHO05D004828 8.9e-116 421.4 451 50.1
BraA09t40336Z Brassica rapa HOM05D003903 ORTHO05D004828 8.9e-116 421.4 451 50.1
Thhalv10010400m.g Eutrema salsugineum HOM05D003903 ORTHO05D004828 8.9e-116 421.4 415 51.6
HPP92_019430 Vanilla planifolia HOM05D003903 ORTHO05D004828 1.2e-115 421.0 461 49.2
Lalb_Chr15g0084211 Lupinus albus HOM05D003903 ORTHO05D004828 2.6e-115 419.9 454 49.6
BolC8t50737H Brassica oleracea HOM05D003903 ORTHO05D004828 3.4e-115 419.5 451 50.1
Zm00001eb147510 Zea mays HOM05D003903 ORTHO05D004828 5.8e-115 418.7 465 47.7
C08p31160 Brassica napus HOM05D003903 ORTHO05D004828 2.9e-114 416.4 451 49.9
Glyma.14G061200 Glycine max HOM05D003903 ORTHO05D004828 2.9e-114 416.4 461 47.7
VMungo0647G1175 Vigna mungo HOM05D003903 ORTHO05D004828 6.4e-114 415.2 458 46.7
Phvul.008G225500 Phaseolus vulgaris HOM05D003903 ORTHO05D004828 1.4e-113 414.1 453 47.9
Medtr5g082150 Medicago truncatula HOM05D003903 ORTHO05D004828 1.8e-113 413.7 456 48.2
BcaC02g07343 Brassica carinata HOM05D003903 ORTHO05D004828 5.4e-113 412.1 438 49.1
Lalb_Chr18g0052671 Lupinus albus HOM05D003903 ORTHO05D004828 1.2e-112 411.0 441 49.9
Glyma.02G255400 Glycine max HOM05D003903 ORTHO05D004828 7.8e-112 408.3 461 48.8
Os01g0855600 Oryza sativa ssp. japonica HOM05D003903 ORTHO05D004828 1.1e-110 404.4 466 45.9
Zm00001eb367110 Zea mays HOM05D003903 ORTHO05D004828 3.3e-110 402.9 457 47.3
SEGI_13375 Sequoiadendron giganteum HOM05D003903 ORTHO05D004828 8.9e-108 394.8 442 46.6
SEGI_25890 Sequoiadendron giganteum HOM05D003903 ORTHO05D004828 2.6e-107 393.3 440 46.4
Pp3c7_23390 Physcomitrium patens HOM05D003903 ORTHO05D004828 1.2e-99 367.9 451 42.8
Pp3c11_5520 Physcomitrium patens HOM05D003903 ORTHO05D004828 2.0e-99 367.1 451 43.7
Pp3c1_9290 Physcomitrium patens HOM05D003903 ORTHO05D004828 5.8e-99 365.5 451 43.2
Pp3c2_27180 Physcomitrium patens HOM05D003903 ORTHO05D004828 6.2e-93 345.5 451 41.2
Pp3c10_11250 Physcomitrium patens HOM05D003903 ORTHO05D004828 9.9e-91 338.2 448 41.7
BcaB06g29121 Brassica carinata HOM05D003903 ORTHO05D004828 3.6e-85 319.7 356 48.3
BcaB01g00057 Brassica carinata HOM05D003903 ORTHO05D004828 3.2e-81 306.6 438 42.0
Eucgr.G03040 Eucalyptus grandis HOM05D003903 ORTHO05D004828 4.3e-70 269.6 277 50.2
Pp3c1_34950 Physcomitrium patens HOM05D003903 ORTHO05D004828 8.1e-69 265.4 357 40.1
MBI09_g39159_MAGBIO Magnolia biondii HOM05D003903 ORTHO05D004828 3.0e-63 246.9 211 56.4
C04p07450 Brassica napus HOM05D003903 ORTHO05D004828 1.8e-60 237.7 205 55.6
BolC4t22365H Brassica oleracea HOM05D003903 ORTHO05D004828 2.4e-60 237.3 205 55.6
Dinv34412 Davidia involucrata HOM05D003903 ORTHO05D004828 2.3e-55 220.7 204 56.4
BcaNung05460 Brassica carinata HOM05D003903 ORTHO05D004828 9.4e-49 198.7 166 60.2
MBI15_g28805_MAGBIO Magnolia biondii HOM05D003903 ORTHO05D004828 1.0e-47 195.3 211 49.3
TPR.G2520 Trifolium pratense HOM05D003903 ORTHO05D004828 3.0e-39 167.2 204 45.1
Nn5g26808 Nelumbo nucifera HOM05D003903 ORTHO05D004828 7.7e-35 152.5 273 34.4
arahy.Tifrunner.gnm1.ann1.I5QRDP Arachis hypogaea HOM05D003903 ORTHO05D004828 1.2e-24 118.6 124 44.4
BcaNung05461 Brassica carinata HOM05D003903 ORTHO05D004828 1.2e-19 102.1 82 58.5
BcaC09g52232 Brassica carinata HOM05D003903 ORTHO05D031840 1.3e-18 98.6 125 44.0
C08p31450 Brassica napus HOM05D003903 ORTHO05D031840 8.8e-15 85.9 90 46.7
ATR0693G017 Amborella trichopoda HOM05D003903 ORTHO05D004828 3.4e-14 84.0 107 39.3
BolC7t41876H Brassica oleracea HOM05D003903 ORTHO05D031840 8.3e-13 79.3 92 44.6
MBI02_g23015_MAGBIO Magnolia biondii HOM05D003903 ORTHO05D004828 7.5e-06 56.2 69 39.1


User provided reference genes

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