Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G2082 Erigeron canadensis HOM05D008415 ORTHO05D010601 1.0e-154 550.1 276 100.0
Lsat_1_v5_gn_2_98161 Lactuca sativa HOM05D008415 ORTHO05D010601 2.3e-82 309.7 281 64.1
HanXRQChr14g0445691 Helianthus annuus HOM05D008415 ORTHO05D010601 4.3e-73 278.9 278 59.4
Oeu059099.1 Olea europaea HOM05D008415 ORTHO05D010601 4.8e-48 195.7 288 46.2
vmacro14451 Vaccinium macrocarpon HOM05D008415 ORTHO05D010601 7.7e-46 188.3 280 46.1
Cc01_g11390 Coffea canephora HOM05D008415 ORTHO05D010601 1.0e-45 188.0 284 44.7
Peaxi162Scf00351g00214 Petunia axillaris HOM05D008415 ORTHO05D010601 2.2e-45 186.8 244 48.0
Nitab4.5_0000650g0050 Nicotiana tabacum HOM05D008415 ORTHO05D010601 2.9e-45 186.4 286 43.7
Dinv32770 Davidia involucrata HOM05D008415 ORTHO05D010601 6.5e-45 185.3 288 43.8
Actinidia03741 Actinidia chinensis HOM05D008415 ORTHO05D010601 9.4e-44 181.4 262 45.0
PGSC0003DMG400008064 Solanum tuberosum HOM05D008415 ORTHO05D010601 7.9e-43 178.3 251 47.4
Rhsim01G0218700 Rhododendron simsii HOM05D008415 ORTHO05D010601 1.4e-42 177.6 253 48.2
Migut.D02196 Erythranthe guttata HOM05D008415 ORTHO05D010601 1.8e-42 177.2 278 43.2
Solyc11g069210.2 Solanum lycopersicum HOM05D008415 ORTHO05D010601 2.3e-42 176.8 236 47.9
MSTRG.18650 Avicennia marina HOM05D008415 ORTHO05D010601 3.9e-42 176.0 283 43.5
QL01p023166 Quercus lobata HOM05D008415 ORTHO05D010601 5.1e-42 175.6 286 43.0
GSVIVG01025161001 Vitis vinifera HOM05D008415 ORTHO05D010601 6.7e-42 175.3 224 46.0
Sopen11g027940 Solanum pennellii HOM05D008415 ORTHO05D010601 3.3e-41 172.9 236 47.5
CAN.G631.8 Capsicum annuum HOM05D008415 ORTHO05D010601 8.2e-40 168.3 279 42.3
SalBow3G0300 Salvia bowleyana HOM05D008415 ORTHO05D010601 1.2e-38 164.5 248 45.6
Sed0001336 Sechium edule HOM05D008415 ORTHO05D010601 7.7e-38 161.8 267 42.7
MELO3C025762.2 Cucumis melo HOM05D008415 ORTHO05D010601 1.7e-37 160.6 240 44.6
PGR119G0199 Punica granatum HOM05D008415 ORTHO05D010601 2.9e-37 159.8 205 48.8
TAR633G1891 Trochodendron aralioides HOM05D008415 ORTHO05D010601 5.0e-37 159.1 297 38.7
SGA_v2.0_scaffold61G21159 Striga asiatica HOM05D008415 ORTHO05D010601 1.1e-36 157.9 232 42.7
CSS0041118 Camellia sinensis var. sinensis HOM05D008415 ORTHO05D010601 1.9e-36 157.1 228 43.4
ClCG02G021040 Citrullus lanatus HOM05D008415 ORTHO05D010601 1.6e-35 154.1 242 43.0
CsaV3_6G021730 Cucumis sativus L. HOM05D008415 ORTHO05D010601 3.0e-34 149.8 241 43.6
Psat7g223880 Pisum sativum HOM05D008415 ORTHO05D010601 8.2e-32 141.7 237 39.2
unitig_46.g18232 Utricularia gibba HOM05D008415 ORTHO05D010601 8.2e-32 141.7 207 46.9
Eucgr.J00943 Eucalyptus grandis HOM05D008415 ORTHO05D010601 2.4e-31 140.2 154 50.6
Glyma.11G154841 Glycine max HOM05D008415 ORTHO05D010601 7.7e-30 135.2 233 43.3
Haze_23892 Corylus avellana HOM05D008415 ORTHO05D010601 2.2e-29 133.7 238 42.4
Hma1.2p1_2585F.1_g324920 Hydrangea macrophylla HOM05D008415 ORTHO05D010601 2.9e-29 133.3 160 46.9
Hma1.2p1_1931F.1_g307990 Hydrangea macrophylla HOM05D008415 ORTHO05D010601 6.5e-29 132.1 160 46.9
Lj3g0013437 Lotus japonicus HOM05D008415 ORTHO05D010601 8.5e-29 131.7 238 39.5
arahy.Tifrunner.gnm1.ann1.TY33PY Arachis hypogaea HOM05D008415 ORTHO05D010601 1.6e-27 127.5 229 38.4
arahy.Tifrunner.gnm1.ann1.C7LIDW Arachis hypogaea HOM05D008415 ORTHO05D010601 3.6e-27 126.3 231 37.7
Glyma.12G070700 Glycine max HOM05D008415 ORTHO05D010601 3.6e-27 126.3 238 41.6
CANSAT54G1687 Cannabis sativa HOM05D008415 ORTHO05D010601 1.4e-26 124.4 269 36.1
Lalb_Chr19g0137361 Lupinus albus HOM05D008415 ORTHO05D010601 1.4e-26 124.4 240 38.8
CSS0005479 Camellia sinensis var. sinensis HOM05D008415 ORTHO05D010601 3.9e-26 122.9 193 43.0
Ca_19250_v3 Cicer arietinum L. HOM05D008415 ORTHO05D010601 6.7e-26 122.1 107 54.2
VMungo1127G1728 Vigna mungo HOM05D008415 ORTHO05D010601 1.3e-24 117.9 197 40.1
Medtr4g060050 Medicago truncatula HOM05D008415 ORTHO05D010601 4.8e-24 115.9 192 40.6
Aqoxy2G01080 Aquilegia oxysepala HOM05D008415 ORTHO05D010601 5.3e-23 112.5 96 50.0
Cc07_g02980 Coffea canephora HOM05D008415 ORTHO05D010601 1.1e-20 104.8 136 43.4
Phvul.011G073700 Phaseolus vulgaris HOM05D008415 ORTHO05D010601 1.6e-19 100.9 77 58.4
CiPaw.14G078500 Carya illinoinensis HOM05D008415 ORTHO05D010601 5.2e-18 95.9 96 58.3
Potri.016G129250 Populus trichocarpa HOM05D008415 ORTHO05D010601 9.7e-17 91.7 228 32.0
Os03g0288900 Oryza sativa ssp. japonica HOM05D008415 ORTHO05D010601 1.6e-14 84.3 73 49.3
TPR.G15532 Trifolium pratense HOM05D008415 ORTHO05D010601 2.2e-13 80.5 121 43.0
Lsat_1_v5_gn_5_19040 Lactuca sativa HOM05D005535 ORTHO05D006753 4.4e-09 66.2 96 38.5
BcaB02g09657 Brassica carinata HOM05D005535 ORTHO05D006753 9.8e-09 65.1 101 34.7
Glyma.17G098100 Glycine max HOM05D005535 ORTHO05D006753 1.3e-08 64.7 79 39.2
Atru.chr9.2302 Acer truncatum HOM05D005535 ORTHO05D006753 3.7e-08 63.2 135 32.6
arahy.Tifrunner.gnm1.ann1.WGP01G Arachis hypogaea HOM05D005535 ORTHO05D006753 3.7e-08 63.2 162 32.7
SalBow5G2281 Salvia bowleyana HOM05D005535 ORTHO05D006753 3.7e-08 63.2 87 37.9
SGA_v2.0_scaffold56G20044 Striga asiatica HOM05D005535 ORTHO05D006753 3.7e-08 63.2 200 30.0
Nn3g17153 Nelumbo nucifera HOM05D005535 ORTHO05D006753 4.8e-08 62.8 111 34.2
PSO591G0334 Papaver somniferum HOM05D005535 ORTHO05D006753 4.8e-08 62.8 129 35.7
Sc10g0009960 Simmondsia chinensis HOM05D005535 ORTHO05D006753 4.8e-08 62.8 125 32.0
Glyma.05G028700 Glycine max HOM05D005535 ORTHO05D006753 6.3e-08 62.4 175 29.1
PGSC0003DMG400033073 Solanum tuberosum HOM05D005535 ORTHO05D006753 8.3e-08 62.0 76 36.8
arahy.Tifrunner.gnm1.ann1.G5WMYY Arachis hypogaea HOM05D005535 ORTHO05D006753 1.1e-07 61.6 133 35.3
AUR62008371 Chenopodium quinoa HOM05D005535 ORTHO05D006753 1.1e-07 61.6 110 35.5
Os06g0589500 Oryza sativa ssp. japonica HOM05D005535 ORTHO05D006753 1.1e-07 61.6 78 39.7
Phvul.003G191800 Phaseolus vulgaris HOM05D005535 ORTHO05D006753 1.4e-07 61.2 76 39.5
Lj4g0008602 Lotus japonicus HOM05D005535 ORTHO05D006753 1.8e-07 60.8 59 47.5
BraA06t25881Z Brassica rapa HOM05D005535 ORTHO05D006753 2.4e-07 60.5 101 33.7
Zm00001eb277070 Zea mays HOM05D005535 ORTHO05D006753 2.4e-07 60.5 77 41.6
Hma1.2p1_0104F.1_g050150 Hydrangea macrophylla HOM05D005535 ORTHO05D006753 3.1e-07 60.1 134 30.6
Lj1g0015301 Lotus japonicus HOM05D005535 ORTHO05D006753 3.1e-07 60.1 102 37.3
vmacro16564 Vaccinium macrocarpon HOM05D005535 ORTHO05D006753 3.1e-07 60.1 87 36.8
CAN.G628.33 Capsicum annuum HOM05D005535 ORTHO05D006753 4.1e-07 59.7 137 32.8
Lj5A114T27 Lonicera japonica HOM05D005535 ORTHO05D006753 4.1e-07 59.7 76 36.8
SEGI_01090 Sequoiadendron giganteum HOM05D005535 ORTHO05D006753 4.1e-07 59.7 296 27.0
HPP92_024074 Vanilla planifolia HOM05D005535 ORTHO05D006753 4.1e-07 59.7 56 51.8
PSO478G1818 Papaver somniferum HOM05D005535 ORTHO05D006753 5.4e-07 59.3 57 47.4
QL10p015851 Quercus lobata HOM05D005535 ORTHO05D006753 5.4e-07 59.3 250 26.8
MBI01_g12912_MAGBIO Magnolia biondii HOM05D005535 ORTHO05D006753 7.0e-07 58.9 171 29.2
PSO017G0680 Papaver somniferum HOM05D005535 ORTHO05D006753 7.0e-07 58.9 57 47.4
Sopen06g027240 Solanum pennellii HOM05D005535 ORTHO05D006753 7.0e-07 58.9 69 42.0
Gorai.008G191600 Gossypium raimondii HOM05D005535 ORTHO05D006753 9.1e-07 58.5 122 36.9
Oeu006178.3 Olea europaea HOM05D005535 ORTHO05D006753 9.1e-07 58.5 70 42.9
Oeu022201.1 Olea europaea HOM05D005535 ORTHO05D006753 9.1e-07 58.5 96 36.5
AT5G62550 Arabidopsis thaliana HOM05D005535 ORTHO05D006753 1.2e-06 58.2 94 36.2
Peaxi162Scf00013g00129 Petunia axillaris HOM05D005535 ORTHO05D006753 1.2e-06 58.2 112 32.1
Aa31LG11G1090 Aethionema arabicum HOM05D005535 ORTHO05D006753 1.6e-06 57.8 188 27.1
MELO3C017158.2 Cucumis melo HOM05D005535 ORTHO05D006753 1.6e-06 57.8 200 28.0
CsaV3_1G002190 Cucumis sativus L. HOM05D005535 ORTHO05D006753 1.6e-06 57.8 200 28.0
Eucgr.B00441 Eucalyptus grandis HOM05D005535 ORTHO05D006753 1.6e-06 57.8 168 26.8
FAN13G1299 Fragaria x ananassa HOM05D005535 ORTHO05D006753 1.6e-06 57.8 95 37.9
PGR083G2381 Punica granatum HOM05D005535 ORTHO05D006753 1.6e-06 57.8 128 31.2
Sed0009946 Sechium edule HOM05D005535 ORTHO05D006753 1.6e-06 57.8 199 30.7
A06p29250 Brassica napus HOM05D005535 ORTHO05D006753 2.0e-06 57.4 182 28.6
Lalb_Chr12g0196771 Lupinus albus HOM05D005535 ORTHO05D006753 2.0e-06 57.4 115 33.9
ATR1120G167 Amborella trichopoda HOM05D005535 ORTHO05D006753 2.7e-06 57.0 156 33.3
Aqoxy3G00718 Aquilegia oxysepala HOM05D005535 ORTHO05D006753 2.7e-06 57.0 56 46.4
BcaC01g02485 Brassica carinata HOM05D005535 ORTHO05D006753 3.5e-06 56.6 183 27.3
C03p64280 Brassica napus HOM05D005535 ORTHO05D006753 3.5e-06 56.6 183 27.3
BolC3t18683H Brassica oleracea HOM05D005535 ORTHO05D006753 3.5e-06 56.6 183 27.3
FAN08G2745 Fragaria x ananassa HOM05D005535 ORTHO05D006753 4.5e-06 56.2 133 31.6
Peaxi162Scf00009g00219 Petunia axillaris HOM05D005535 ORTHO05D006753 4.5e-06 56.2 164 31.7
SGA_v2.0_scaffold162G37926 Striga asiatica HOM05D005535 ORTHO05D006753 4.5e-06 56.2 145 30.3
Cfa018977 Carpinus fangiana HOM05D005535 ORTHO05D006753 5.9e-06 55.8 164 33.5
Thecc.03G081300 Theobroma cacao HOM05D005535 ORTHO05D006753 5.9e-06 55.8 183 30.6
Dinv38677 Davidia involucrata HOM05D005535 ORTHO05D006753 7.7e-06 55.5 177 29.9
Rhsim12G0158200 Rhododendron simsii HOM05D005535 ORTHO05D006753 7.7e-06 55.5 135 31.9


User provided reference genes

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