Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G1912 Erigeron canadensis HOM05D000278 ORTHO05D186777 0.0e+00 1541.9 784 100.0
ECA238G2413 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-267 926.0 641 77.8
ECA238G1981 Erigeron canadensis HOM05D000278 ORTHO05D187928 5.7e-86 323.2 399 49.1
ECA240G3890 Erigeron canadensis HOM05D000278 ORTHO05D188415 1.5e-57 228.8 342 44.2
DCAR_023796 Daucus carota HOM05D000278 ORTHO05D004794 4.0e-39 167.5 432 32.2
Lalb_Chr04g0249751 Lupinus albus HOM05D000278 ORTHO05D004794 8.8e-39 166.4 465 31.6
DCAR_027486 Daucus carota HOM05D000278 ORTHO05D004794 3.4e-38 164.5 454 31.3
Lalb_Chr10g0105841 Lupinus albus HOM05D000278 ORTHO05D004794 9.8e-38 162.9 465 31.4
Prupe.6G154400 Prunus persica HOM05D000278 ORTHO05D004794 1.3e-37 162.5 454 31.5
Sabra04G0132500 Salix brachista HOM05D000278 ORTHO05D004794 1.3e-37 162.5 454 31.1
Lj2A907T33 Lonicera japonica HOM05D000278 ORTHO05D004794 1.7e-37 162.2 448 30.8
HanXRQChr15g0468701 Helianthus annuus HOM05D000278 ORTHO05D004794 2.2e-37 161.8 465 31.2
Haze_23638 Corylus avellana HOM05D000278 ORTHO05D004794 2.8e-37 161.4 453 31.6
AagrBONN_evm.TU.Sc2ySwM_117.2607 Anthoceros agrestis HOM05D000278 ORTHO05D004794 4.9e-37 160.6 449 30.5
MSTRG.11745 Avicennia marina HOM05D000278 ORTHO05D004794 4.9e-37 160.6 454 30.4
PSO541G3784 Papaver somniferum HOM05D000278 ORTHO05D004794 4.9e-37 160.6 459 31.6
Pp3c15_8230 Physcomitrium patens HOM05D000278 ORTHO05D004794 4.9e-37 160.6 449 30.7
SalBow8G4259 Salvia bowleyana HOM05D000278 ORTHO05D004794 4.9e-37 160.6 470 30.4
SalBow8G4293 Salvia bowleyana HOM05D000278 ORTHO05D004794 4.9e-37 160.6 470 30.4
LjContig00564g0022207 Lotus japonicus HOM05D000278 ORTHO05D004794 6.3e-37 160.2 448 30.6
Thecc.01G126500 Theobroma cacao HOM05D000278 ORTHO05D004794 6.3e-37 160.2 454 30.6
Zm00001eb207780 Zea mays HOM05D000278 ORTHO05D004794 6.3e-37 160.2 446 30.9
PGSC0003DMG400026124 Solanum tuberosum HOM05D000278 ORTHO05D004794 8.3e-37 159.8 465 30.5
SGA_v2.0_scaffold169G38626 Striga asiatica HOM05D000278 ORTHO05D004794 8.3e-37 159.8 448 30.4
CSS0017916 Camellia sinensis var. sinensis HOM05D000278 ORTHO05D004794 1.1e-36 159.5 465 30.5
CANSAT35G1978 Cannabis sativa HOM05D000278 ORTHO05D004794 1.1e-36 159.5 454 30.4
Ciclev10014771m.g Citrus clementina HOM05D000278 ORTHO05D004794 1.1e-36 159.5 454 31.3
MD03G1164100 Malus domestica HOM05D000278 ORTHO05D004794 1.1e-36 159.5 448 31.0
PSO675G7679 Papaver somniferum HOM05D000278 ORTHO05D004794 1.1e-36 159.5 459 31.6
Solyc06g065520.3 Solanum lycopersicum HOM05D000278 ORTHO05D004794 1.1e-36 159.5 465 30.5
Sopen06g024160 Solanum pennellii HOM05D000278 ORTHO05D004794 1.1e-36 159.5 465 30.5
BolC5t34275H Brassica oleracea HOM05D000278 ORTHO05D004794 1.4e-36 159.1 459 30.9
Gohir.A11G230300 Gossypium hirsutum HOM05D000278 ORTHO05D004794 1.4e-36 159.1 454 30.8
Gohir.D11G229500 Gossypium hirsutum HOM05D000278 ORTHO05D004794 1.4e-36 159.1 454 31.1
Gorai.003G068300 Gossypium raimondii HOM05D000278 ORTHO05D004794 1.4e-36 159.1 454 31.1
Lsat_1_v5_gn_5_64940 Lactuca sativa HOM05D000278 ORTHO05D004794 1.4e-36 159.1 459 31.2
Potri.004G195300 Populus trichocarpa HOM05D000278 ORTHO05D004794 1.4e-36 159.1 454 30.4
Hund02336 Selenicereus undatus HOM05D000278 ORTHO05D004794 1.4e-36 159.1 465 30.5
Dinv32841 Davidia involucrata HOM05D000278 ORTHO05D004794 1.8e-36 158.7 454 30.4
Gorai.008G000400 Gossypium raimondii HOM05D000278 ORTHO05D004794 1.8e-36 158.7 454 30.6
Nn6g31931 Nelumbo nucifera HOM05D000278 ORTHO05D004794 1.8e-36 158.7 454 30.6
QL01p020501 Quercus lobata HOM05D000278 ORTHO05D004794 1.8e-36 158.7 454 31.1
arahy.Tifrunner.gnm1.ann1.H62ZJF Arachis hypogaea HOM05D000278 ORTHO05D004794 2.4e-36 158.3 465 31.0
BraA05t22550Z Brassica rapa HOM05D000278 ORTHO05D004794 2.4e-36 158.3 459 30.9
Cpa.g.sc103.86 Carica papaya HOM05D000278 ORTHO05D004794 2.4e-36 158.3 454 30.2
ECA238G3358 Erigeron canadensis HOM05D000278 ORTHO05D004794 2.4e-36 158.3 448 31.0
Migut.E01490 Erythranthe guttata HOM05D000278 ORTHO05D004794 2.4e-36 158.3 454 30.6
Pp3c9_14010 Physcomitrium patens HOM05D000278 ORTHO05D004794 2.4e-36 158.3 449 30.7
GSVIVG01002278001 Vitis vinifera HOM05D000278 ORTHO05D004794 2.4e-36 158.3 454 30.6
C05p56080 Brassica napus HOM05D000278 ORTHO05D004794 3.1e-36 157.9 462 31.0
Duzib147G1120 Durio zibethinus HOM05D000278 ORTHO05D004794 3.1e-36 157.9 454 30.6
Gohir.D12G001100 Gossypium hirsutum HOM05D000278 ORTHO05D004794 3.1e-36 157.9 454 30.6
Hma1.2p1_1466F.1_g285420 Hydrangea macrophylla HOM05D000278 ORTHO05D004794 3.1e-36 157.9 454 30.6
Ah.04g164010 Amaranthus hybridus HOM05D000278 ORTHO05D004794 4.1e-36 157.5 465 30.8
Psat0s921g0240 Pisum sativum HOM05D000278 ORTHO05D004794 4.1e-36 157.5 454 30.4
ATR0661G304 Amborella trichopoda HOM05D000278 ORTHO05D004794 5.4e-36 157.1 454 30.4
Cc11_g01300 Coffea canephora HOM05D000278 ORTHO05D004794 5.4e-36 157.1 465 29.9
Gohir.A12G001300 Gossypium hirsutum HOM05D000278 ORTHO05D004794 5.4e-36 157.1 454 30.4
A05p37520 Brassica napus HOM05D000278 ORTHO05D004794 7.0e-36 156.8 460 30.9
FAN16G1090 Fragaria x ananassa HOM05D000278 ORTHO05D004794 7.0e-36 156.8 463 30.9
FAN25G3467 Fragaria x ananassa HOM05D000278 ORTHO05D004794 7.0e-36 156.8 463 30.9
Manes.11G109600 Manihot esculenta HOM05D000278 ORTHO05D004794 7.0e-36 156.8 454 30.8
Nitab4.5_0003976g0060 Nicotiana tabacum HOM05D000278 ORTHO05D004794 7.0e-36 156.8 458 30.8
Migut.A00285 Erythranthe guttata HOM05D000278 ORTHO05D004794 9.2e-36 156.4 454 31.3
RcHm_v2.0_Chr2g0128841 Rosa chinensis HOM05D000278 ORTHO05D004794 9.2e-36 156.4 463 30.9
SGA_v2.0_scaffold4G02195 Striga asiatica HOM05D000278 ORTHO05D004794 9.2e-36 156.4 408 31.4
Actinidia22468 Actinidia chinensis HOM05D000278 ORTHO05D004794 1.2e-35 156.0 465 30.3
BcaC05g29321 Brassica carinata HOM05D000278 ORTHO05D004794 1.2e-35 156.0 462 30.7
FAN11G3227 Fragaria x ananassa HOM05D000278 ORTHO05D004794 1.2e-35 156.0 463 30.7
Aa31LG5G8530 Aethionema arabicum HOM05D000278 ORTHO05D004794 1.6e-35 155.6 454 30.2
BcaB04g18663 Brassica carinata HOM05D000278 ORTHO05D004794 1.6e-35 155.6 465 30.5
BcaB04g21115 Brassica carinata HOM05D000278 ORTHO05D004794 1.6e-35 155.6 460 30.9
BcaB06g25572 Brassica carinata HOM05D000278 ORTHO05D004794 1.6e-35 155.6 460 30.9
BraA01t04158Z Brassica rapa HOM05D000278 ORTHO05D004794 1.6e-35 155.6 460 30.9
Duzib187G1092 Durio zibethinus HOM05D000278 ORTHO05D004794 1.6e-35 155.6 454 30.4
Nitab4.5_0005873g0040 Nicotiana tabacum HOM05D000278 ORTHO05D004794 1.6e-35 155.6 465 30.3
RcHm_v2.0_Chr5g0049871 Rosa chinensis HOM05D000278 ORTHO05D004794 1.6e-35 155.6 463 30.9
AL3G23390 Arabidopsis lyrata HOM05D000278 ORTHO05D004794 2.0e-35 155.2 465 30.8
AT3G11830 Arabidopsis thaliana HOM05D000278 ORTHO05D004794 2.0e-35 155.2 465 30.8
BcaC01g04077 Brassica carinata HOM05D000278 ORTHO05D004794 2.0e-35 155.2 460 30.9
A03p37310 Brassica napus HOM05D000278 ORTHO05D004794 2.0e-35 155.2 460 30.9
BraA03t12891Z Brassica rapa HOM05D000278 ORTHO05D004794 2.0e-35 155.2 460 30.9
Carub.0003s1118 Capsella rubella HOM05D000278 ORTHO05D004794 2.0e-35 155.2 465 30.5
Dinv32114 Davidia involucrata HOM05D000278 ORTHO05D004794 2.0e-35 155.2 454 30.8
Duzib264G0906 Durio zibethinus HOM05D000278 ORTHO05D004794 2.0e-35 155.2 454 30.6
Eucgr.J00618 Eucalyptus grandis HOM05D000278 ORTHO05D004794 2.0e-35 155.2 465 30.8
Thhalv10020422m.g Eutrema salsugineum HOM05D000278 ORTHO05D004794 2.0e-35 155.2 454 30.4
THA.LOC104826479 Tarenaya hassleriana HOM05D000278 ORTHO05D004794 2.0e-35 155.2 454 31.1
VMungo0647G0629 Vigna mungo HOM05D000278 ORTHO05D004794 2.0e-35 155.2 465 30.1
CsaV3_1G041990 Cucumis sativus L. HOM05D000278 ORTHO05D004794 2.7e-35 154.8 448 30.1
ECA233G6179 Erigeron canadensis HOM05D066339 ORTHO05D187651 2.7e-35 154.8 301 35.9
FvH4_3g27240 Fragaria vesca HOM05D000278 ORTHO05D004794 2.7e-35 154.8 463 30.5
Phvul.008G208800 Phaseolus vulgaris HOM05D000278 ORTHO05D004794 2.7e-35 154.8 465 29.9
HPP92_007029 Vanilla planifolia HOM05D000278 ORTHO05D004794 2.7e-35 154.8 452 30.3
BcaC09g48192 Brassica carinata HOM05D000278 ORTHO05D004794 3.5e-35 154.5 460 30.9
Sc03g0004270 Simmondsia chinensis HOM05D000278 ORTHO05D004794 3.5e-35 154.5 454 30.0
Medtr5g087560 Medicago truncatula HOM05D000278 ORTHO05D004794 4.5e-35 154.1 454 30.2
Sed0019588 Sechium edule HOM05D000278 ORTHO05D004794 4.5e-35 154.1 454 29.5
AUR62019654 Chenopodium quinoa HOM05D000278 ORTHO05D004794 5.9e-35 153.7 487 29.4
Sed0013756 Sechium edule HOM05D000278 ORTHO05D004794 5.9e-35 153.7 454 29.5
TWI75G0864 Tripterygium wilfordii HOM05D000278 ORTHO05D004794 5.9e-35 153.7 455 30.5
unitig_749.g13821 Utricularia gibba HOM05D000278 ORTHO05D004794 5.9e-35 153.7 448 30.6
BolC1t05287H Brassica oleracea HOM05D000278 ORTHO05D004794 7.7e-35 153.3 460 30.9
Aqoxy6G02051 Aquilegia oxysepala HOM05D000278 ORTHO05D004794 1.0e-34 152.9 465 30.3
EL10Ac4g08419 Beta vulgaris HOM05D000278 ORTHO05D004794 1.0e-34 152.9 465 30.1
PGR119G0569 Punica granatum HOM05D000278 ORTHO05D004794 1.0e-34 152.9 454 30.4
Actinidia06356 Actinidia chinensis HOM05D000278 ORTHO05D004794 1.3e-34 152.5 465 30.1
AUR62013959 Chenopodium quinoa HOM05D000278 ORTHO05D004794 1.3e-34 152.5 475 29.9
Mapoly0156s0015 Marchantia polymorpha HOM05D000278 ORTHO05D004794 1.3e-34 152.5 449 29.8
TWI31G0144 Tripterygium wilfordii HOM05D000278 ORTHO05D004794 1.3e-34 152.5 448 29.7
CARHR086380 Cardamine hirsuta HOM05D000278 ORTHO05D004794 1.7e-34 152.1 465 30.5
MBI08_g21308_MAGBIO Magnolia biondii HOM05D000278 ORTHO05D004794 1.7e-34 152.1 454 30.2
CDE02G3738 Ceratophyllum demersum HOM05D000278 ORTHO05D004794 2.3e-34 151.8 448 29.7
Glyma.02G273200 Glycine max HOM05D000278 ORTHO05D004794 2.3e-34 151.8 465 29.7
Rhsim05G0064500 Rhododendron simsii HOM05D000278 ORTHO05D004794 2.3e-34 151.8 465 30.3
TAR625G0442 Trochodendron aralioides HOM05D000278 ORTHO05D004794 2.3e-34 151.8 437 30.2
SMO347G0357 Selaginella moellendorffii HOM05D000278 ORTHO05D004794 2.9e-34 151.4 449 30.1
Peaxi162Scf00038g02039 Petunia axillaris HOM05D000278 ORTHO05D004794 6.6e-34 150.2 507 28.8
C03p45300 Brassica napus HOM05D000278 ORTHO05D004794 1.1e-33 149.4 449 30.3
BolC3t16793H Brassica oleracea HOM05D000278 ORTHO05D004794 1.1e-33 149.4 449 30.3
Glyma.14G043400 Glycine max HOM05D000278 ORTHO05D004794 1.1e-33 149.4 465 29.5
THA.LOC104816967 Tarenaya hassleriana HOM05D000278 ORTHO05D004794 3.3e-33 147.9 457 29.8
Peaxi162Scf00275g00008 Petunia axillaris HOM05D000278 ORTHO05D004794 1.6e-32 145.6 426 30.8
vmacro08485 Vaccinium macrocarpon HOM05D000278 ORTHO05D004794 2.1e-32 145.2 452 29.0
SHI25343 Sapria himalayana HOM05D000278 ORTHO05D004794 3.6e-32 144.4 437 30.0
Aa31LG3G5320 Aethionema arabicum HOM05D000278 ORTHO05D004794 8.0e-32 143.3 333 33.3
MELO3C015615.2 Cucumis melo HOM05D000278 ORTHO05D004794 8.0e-32 143.3 462 29.0
FAN16G3564 Fragaria x ananassa HOM05D000278 ORTHO05D004794 1.8e-31 142.1 454 31.1
CSS0003568 Camellia sinensis var. sinensis HOM05D000278 ORTHO05D004794 4.0e-31 141.0 465 29.5
CDE06G0515 Ceratophyllum demersum HOM05D000278 ORTHO05D004794 3.4e-30 137.9 421 28.5
ClCG03G014240 Citrullus lanatus HOM05D000278 ORTHO05D004794 4.4e-30 137.5 375 29.9
HanXRQChr12g0378161 Helianthus annuus HOM05D000278 ORTHO05D004794 9.8e-30 136.3 448 29.2
MCO06G165 Micromonas commoda HOM05D000278 ORTHO05D004794 1.7e-29 135.6 449 26.9
COL.COLO4_14011 Corchorus olitorius HOM05D000278 ORTHO05D004794 2.2e-29 135.2 448 28.8
Cre01.g026550 Chlamydomonas reinhardtii HOM05D000278 ORTHO05D004794 2.9e-29 134.8 450 27.1
CiPaw.14G092200 Carya illinoinensis HOM05D000278 ORTHO05D004794 6.4e-29 133.7 448 28.8
Sabra09G0123000 Salix brachista HOM05D000278 ORTHO05D004794 1.8e-28 132.1 448 28.6
Sp3g10060 Schrenkiella parvula HOM05D000278 ORTHO05D004794 2.4e-28 131.7 368 32.1
Potri.009G157400 Populus trichocarpa HOM05D000278 ORTHO05D004794 7.0e-28 130.2 448 28.3
TAR381G1107 Trochodendron aralioides HOM05D000278 ORTHO05D004794 4.6e-27 127.5 462 27.5
Cfa025880 Carpinus fangiana HOM05D000278 ORTHO05D004794 8.6e-26 123.2 442 26.2
CBR_g42151 Chara braunii HOM05D000278 ORTHO05D004794 8.6e-26 123.2 441 26.1
ATR0099G017 Amborella trichopoda HOM05D000278 ORTHO05D004794 2.3e-23 115.2 439 27.6
TAR628G0924 Trochodendron aralioides HOM05D000278 ORTHO05D004794 5.2e-23 114.0 336 30.1
unitig_26.g9787 Utricularia gibba HOM05D000278 ORTHO05D004794 2.0e-22 112.1 447 26.8
SEGI_21483 Sequoiadendron giganteum HOM05D000278 ORTHO05D004794 9.8e-22 109.8 321 29.6
CAN.G199.51 Capsicum annuum HOM05D000278 ORTHO05D004794 2.9e-21 108.2 393 27.0
Atru.chr3.2916 Acer truncatum HOM05D000278 ORTHO05D004794 3.7e-21 107.8 297 32.0
PRCOL_00005497 Prasinoderma coloniale HOM05D000278 ORTHO05D004794 1.9e-20 105.5 448 25.7
Os06g0687700 Oryza sativa ssp. japonica HOM05D000278 ORTHO05D004794 3.2e-20 104.8 279 31.9
HPP92_007072 Vanilla planifolia HOM05D000278 ORTHO05D004794 4.1e-20 104.4 430 26.3
Haze_26775 Corylus avellana HOM05D000278 ORTHO05D004794 4.6e-19 100.9 281 26.7
Potri.004G195100 Populus trichocarpa HOM05D000278 ORTHO05D004794 6.6e-18 97.1 221 34.4
TPR.G11653 Trifolium pratense HOM05D000278 ORTHO05D004794 3.4e-14 84.7 250 29.2
ATR0099G041 Amborella trichopoda HOM05D000278 ORTHO05D004794 3.2e-12 78.2 343 26.8
ATR0099G014 Amborella trichopoda HOM05D000278 ORTHO05D004794 3.0e-10 71.6 183 32.2
ATR0099G056 Amborella trichopoda HOM05D000278 ORTHO05D004794 3.0e-10 71.6 370 24.6
ATR0638G001 Amborella trichopoda HOM05D000278 ORTHO05D004794 3.3e-09 68.2 183 31.7
Zm00001eb045220 Zea mays HOM05D000278 ORTHO05D004794 5.6e-09 67.4 130 36.2
ATR0408G001 Amborella trichopoda HOM05D000278 ORTHO05D004794 1.4e-07 62.8 104 37.5
ECA233G0445 Erigeron canadensis HOM05D066339 ORTHO05D187078 1.8e-07 62.4 68 50.0
MCO11G383 Micromonas commoda HOM05D000278 ORTHO05D005056 2.6e-06 58.5 385 22.9


User provided reference genes

Program Settings