Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 4.9e-299 1030.4 538 100.0
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 7.1e-197 691.0 547 69.3
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 4.2e-165 585.5 463 68.7
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 2.1e-148 530.0 519 55.5
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 6.7e-139 498.4 511 54.0
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 2.2e-137 493.4 495 56.2
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 2.6e-135 486.5 523 52.8
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 4.5e-135 485.7 498 55.2
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 1.7e-134 483.8 523 52.2
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 2.9e-134 483.0 530 51.7
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 5.5e-133 478.8 514 52.1
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 7.2e-133 478.4 512 52.0
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 7.2e-133 478.4 500 54.8
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 6.1e-132 475.3 533 52.2
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 8.0e-132 474.9 504 53.6
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 1.0e-131 474.6 509 53.4
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 1.5e-130 470.7 504 53.2
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 8.3e-129 464.9 494 54.5
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 1.1e-128 464.5 495 53.3
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 2.4e-128 463.4 516 49.8
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 5.4e-128 462.2 513 50.9
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 1.2e-127 461.1 533 50.7
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 2.0e-127 460.3 511 50.1
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 2.7e-127 459.9 522 50.6
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 7.7e-127 458.4 520 51.3
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 1.3e-126 457.6 484 50.8
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 1.1e-125 454.5 460 55.4
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 1.5e-125 454.1 523 50.5
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.5e-125 453.4 529 50.3
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 3.2e-125 453.0 513 49.3
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 4.2e-125 452.6 508 49.4
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 9.4e-125 451.4 528 49.6
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 1.2e-124 451.1 513 50.5
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 3.6e-124 449.5 521 49.9
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 8.0e-124 448.4 520 50.6
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.0e-123 448.0 543 49.0
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 2.3e-123 446.8 503 51.1
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 3.0e-123 446.4 518 47.7
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 5.2e-123 445.7 505 48.9
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 1.5e-122 444.1 565 47.6
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 3.4e-122 443.0 505 49.9
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 4.4e-122 442.6 494 51.0
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 1.7e-121 440.7 505 49.3
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 6.3e-121 438.7 540 48.9
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 1.8e-120 437.2 498 50.4
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.2e-119 434.5 484 51.9
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 5.9e-119 432.2 477 53.7
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 1.0e-118 431.4 543 47.3
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 1.3e-118 431.0 527 48.2
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 2.5e-117 426.8 479 50.3
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 5.5e-117 425.6 497 49.9
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 1.6e-116 424.1 493 47.7
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 3.6e-116 422.9 496 48.2
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 3.6e-116 422.9 497 48.7
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 4.7e-116 422.5 532 47.4
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 8.0e-116 421.8 527 48.2
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 8.0e-116 421.8 452 52.0
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 1.0e-115 421.4 575 45.2
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 4.0e-115 419.5 494 48.0
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 6.8e-115 418.7 510 46.9
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 1.5e-114 417.5 496 48.6
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 2.0e-114 417.2 497 48.5
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 9.8e-114 414.8 513 47.4
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 1.3e-113 414.5 408 53.2
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 2.2e-113 413.7 494 48.0
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 6.3e-113 412.1 487 48.3
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 4.6e-111 406.0 474 49.8
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 7.8e-111 405.2 569 44.5
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 6.6e-110 402.1 495 46.9
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 1.5e-109 401.0 484 46.9
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 1.9e-109 400.6 491 47.3
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 4.3e-109 399.4 566 44.2
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 5.6e-109 399.1 514 46.5
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 1.8e-107 394.0 529 45.9
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 2.3e-107 393.7 491 46.8
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 4.4e-106 389.4 465 47.3
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 2.2e-105 387.1 374 54.0
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 2.2e-105 387.1 374 54.0
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 8.3e-105 385.2 494 45.5
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 4.1e-104 382.9 529 44.8
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 5.4e-104 382.5 451 51.4
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 7.8e-103 378.6 407 51.8
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 6.6e-102 375.6 514 44.4
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 6.2e-100 369.0 507 45.4
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 3.4e-98 363.2 537 43.8
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 4.4e-98 362.8 528 43.2
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 1.3e-97 361.3 366 56.0
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 1.5e-93 347.8 498 43.6
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 3.1e-91 340.1 455 44.2
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 8.4e-89 332.0 566 38.9
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 2.3e-86 323.9 354 50.8
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 2.1e-84 317.4 423 44.7
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 8.7e-78 295.4 456 39.7
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 1.5e-74 284.6 491 38.3
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 7.6e-74 282.3 379 43.5
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 1.3e-73 281.6 507 37.5
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 5.4e-72 276.2 424 42.0
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 2.0e-66 257.7 296 49.7
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 1.4e-64 251.5 348 42.0
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 5.1e-62 243.0 501 35.1
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 2.8e-60 237.3 408 36.3
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 4.0e-59 233.4 553 31.8
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 3.2e-56 223.8 204 54.4
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 2.1e-55 221.1 329 38.3
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.0e-42 177.9 185 53.0
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 1.3e-41 175.3 239 43.5
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 1.7e-41 174.9 194 50.0
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 4.2e-40 170.2 195 50.8
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 5.9e-34 149.8 158 53.2
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 1.7e-33 148.3 165 50.3
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 6.5e-33 146.4 221 40.7
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 4.7e-31 140.2 252 38.5
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 1.8e-22 111.7 477 25.4
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 3.1e-19 100.9 87 59.8
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 3.4e-13 80.9 148 39.2
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 4.8e-12 77.0 91 48.4
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 6.3e-12 76.6 101 41.6
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 2.9e-09 67.8 70 48.6
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 8.5e-09 66.2 52 55.8
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 5.5e-08 63.5 66 53.0
C04p54260 Brassica napus HOM05D000452 ORTHO05D005748 8.0e-07 59.7 90 36.7
BolC2t09709H Brassica oleracea HOM05D000452 ORTHO05D005748 3.0e-06 57.8 90 36.7
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 4.0e-06 57.4 90 38.9


User provided reference genes

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