Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G1631 Erigeron canadensis HOM05D000076 ORTHO05D186408 1.5e-40 169.1 86 100.0
Lsat_1_v5_gn_2_70401 Lactuca sativa HOM05D000076 ORTHO05D003143 4.1e-14 81.3 46 82.6
HanXRQChr14g0442961 Helianthus annuus HOM05D000076 ORTHO05D003143 1.1e-11 73.2 71 56.3
TWI77G0797 Tripterygium wilfordii HOM05D000076 ORTHO05D003143 7.2e-11 70.5 53 58.5
ECA246G3067 Erigeron canadensis HOM05D000076 ORTHO05D003143 9.5e-11 70.1 72 56.9
Actinidia06516 Actinidia chinensis HOM05D000076 ORTHO05D003143 1.2e-10 69.7 52 61.5
CSS0014800 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D003143 1.2e-10 69.7 69 53.6
TWI74G1523 Tripterygium wilfordii HOM05D000076 ORTHO05D003143 1.2e-10 69.7 72 50.0
CANSAT01G1570 Cannabis sativa HOM05D000076 ORTHO05D003143 1.6e-10 69.3 54 59.3
Actinidia25310 Actinidia chinensis HOM05D000076 ORTHO05D003143 4.7e-10 67.8 78 47.4
CSS0013652 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D003143 8.0e-10 67.0 72 50.0
Lsat_1_v5_gn_3_62921 Lactuca sativa HOM05D000076 ORTHO05D003143 1.0e-09 66.6 70 54.3
Cfa006884 Carpinus fangiana HOM05D000076 ORTHO05D003143 1.4e-09 66.2 52 59.6
QL06p035742 Quercus lobata HOM05D000076 ORTHO05D003143 1.8e-09 65.9 69 50.7
Nitab4.5_0000128g0110 Nicotiana tabacum HOM05D000076 ORTHO05D003143 2.3e-09 65.5 44 68.2
SGA_v2.0_scaffold195G40853 Striga asiatica HOM05D004598 ORTHO05D003143 2.3e-09 65.5 50 60.0
HanXRQChr13g0405051 Helianthus annuus HOM05D000076 ORTHO05D003143 3.0e-09 65.1 53 58.5
Oeu002144.1 Olea europaea HOM05D000076 ORTHO05D003143 3.0e-09 65.1 49 55.1
Sed0018026 Sechium edule HOM05D000076 ORTHO05D003143 3.0e-09 65.1 47 57.4
CsaV3_6G045000 Cucumis sativus L. HOM05D000076 ORTHO05D003143 4.0e-09 64.7 52 55.8
Cpa.g.sc21.17 Carica papaya HOM05D000076 ORTHO05D003143 5.2e-09 64.3 53 54.7
Hma1.2p1_0119F.1_g056790 Hydrangea macrophylla HOM05D000076 ORTHO05D003143 5.2e-09 64.3 52 55.8
Lj2A534G38 Lonicera japonica HOM05D000076 ORTHO05D003143 5.2e-09 64.3 73 54.8
ClCG01G018370 Citrullus lanatus HOM05D000076 ORTHO05D003143 6.8e-09 63.9 52 55.8
Dinv13603 Davidia involucrata HOM05D000076 ORTHO05D003143 6.8e-09 63.9 53 58.5
Rhsim06G0071800 Rhododendron simsii HOM05D000076 ORTHO05D003143 8.9e-09 63.5 77 46.8
MELO3C007715.2 Cucumis melo HOM05D000076 ORTHO05D003143 1.2e-08 63.2 52 53.8
Duzib147G0094 Durio zibethinus HOM05D000076 ORTHO05D003143 1.2e-08 63.2 53 52.8
DCAR_003448 Daucus carota HOM05D000076 ORTHO05D003143 1.5e-08 62.8 72 48.6
FAN19G1816 Fragaria x ananassa HOM05D000076 ORTHO05D003143 1.5e-08 62.8 45 62.2
Lalb_Chr05g0216351 Lupinus albus HOM05D000076 ORTHO05D003143 1.5e-08 62.8 54 57.4
Haze_03868 Corylus avellana HOM05D000076 ORTHO05D003143 2.0e-08 62.4 48 60.4
Manes.12G126600 Manihot esculenta HOM05D000076 ORTHO05D003143 2.0e-08 62.4 71 47.9
Potri.007G011000 Populus trichocarpa HOM05D000076 ORTHO05D003143 2.0e-08 62.4 72 51.4
MSTRG.23377 Avicennia marina HOM05D000076 ORTHO05D003143 2.6e-08 62.0 50 58.0
Lalb_Chr16g0381631 Lupinus albus HOM05D000076 ORTHO05D003143 2.6e-08 62.0 67 49.3
Sabra07G0008500 Salix brachista HOM05D000076 ORTHO05D003143 2.6e-08 62.0 71 50.7
CAN.G1344.7 Capsicum annuum HOM05D000076 ORTHO05D003143 3.4e-08 61.6 63 50.8
Dinv36928 Davidia involucrata HOM05D000076 ORTHO05D003143 3.4e-08 61.6 53 58.5
RcHm_v2.0_Chr2g0111231 Rosa chinensis HOM05D000076 ORTHO05D003143 3.4e-08 61.6 43 62.8
CiPaw.07G047700 Carya illinoinensis HOM05D000076 ORTHO05D003143 4.4e-08 61.2 52 55.8
Haze_22452 Corylus avellana HOM05D000076 ORTHO05D003143 4.4e-08 61.2 54 51.9
MBI16_g27583_MAGBIO Magnolia biondii HOM05D000076 ORTHO05D003143 4.4e-08 61.2 50 56.0
Nn1g05566 Nelumbo nucifera HOM05D000076 ORTHO05D003143 4.4e-08 61.2 53 52.8
Nitab4.5_0001468g0080 Nicotiana tabacum HOM05D000076 ORTHO05D003143 4.4e-08 61.2 65 49.2
CDE04G3152 Ceratophyllum demersum HOM05D000076 ORTHO05D003143 5.7e-08 60.8 75 44.0
FvH4_1g19680 Fragaria vesca HOM05D000076 ORTHO05D003143 5.7e-08 60.8 43 62.8
FAN23G1866 Fragaria x ananassa HOM05D000076 ORTHO05D003143 5.7e-08 60.8 43 62.8
FAN26G1657 Fragaria x ananassa HOM05D000076 ORTHO05D003143 5.7e-08 60.8 43 62.8
FAN28G2540 Fragaria x ananassa HOM05D000076 ORTHO05D003143 5.7e-08 60.8 43 62.8
Thecc.01G091000 Theobroma cacao HOM05D000076 ORTHO05D003143 5.7e-08 60.8 53 54.7
GSVIVG01005930001 Vitis vinifera HOM05D000076 ORTHO05D003143 5.7e-08 60.8 53 56.6
GSVIVG01009174001 Vitis vinifera HOM05D000076 ORTHO05D003143 5.7e-08 60.8 51 54.9
QL09p017763 Quercus lobata HOM05D000076 ORTHO05D003143 7.5e-08 60.5 73 45.2
Cfa013792 Carpinus fangiana HOM05D000169 ORTHO05D000542 9.8e-08 60.1 53 52.8
COL.COLO4_35243 Corchorus olitorius HOM05D000076 ORTHO05D003143 9.8e-08 60.1 54 51.9
Lsat_1_v5_gn_6_105021 Lactuca sativa HOM05D000076 ORTHO05D003143 9.8e-08 60.1 53 45.3
Glyma.09G199000 Glycine max HOM05D000076 ORTHO05D003143 1.3e-07 59.7 71 47.9
Gohir.D11G216600 Gossypium hirsutum HOM05D000076 ORTHO05D003143 1.3e-07 59.7 56 53.6
Gorai.007G232700 Gossypium raimondii HOM05D000076 ORTHO05D003143 1.3e-07 59.7 56 53.6
Manes.13G099700 Manihot esculenta HOM05D000076 ORTHO05D003143 1.3e-07 59.7 70 48.6
Hma1.2p1_0125F.1_g058880 Hydrangea macrophylla HOM05D000076 ORTHO05D003143 1.7e-07 59.3 71 43.7
Nitab4.5_0004153g0050 Nicotiana tabacum HOM05D000076 ORTHO05D003143 1.7e-07 59.3 64 53.1
SalBow3G0061 Salvia bowleyana HOM05D000076 ORTHO05D003143 1.7e-07 59.3 79 45.6
SalBow3G2603 Salvia bowleyana HOM05D000076 ORTHO05D003143 1.7e-07 59.3 79 45.6
Duzib093G1653 Durio zibethinus HOM05D000076 ORTHO05D003143 2.8e-07 58.5 54 50.0
MD01G1039200 Malus domestica HOM05D000076 ORTHO05D003143 2.8e-07 58.5 45 60.0
Thecc.08G070700 Theobroma cacao HOM05D000076 ORTHO05D003143 2.8e-07 58.5 71 45.1
Ciclev10000880m.g Citrus clementina HOM05D000076 ORTHO05D003143 3.7e-07 58.2 71 46.5
Migut.H02292 Erythranthe guttata HOM05D000076 ORTHO05D003143 3.7e-07 58.2 77 44.2
Eucgr.F02148 Eucalyptus grandis HOM05D000076 ORTHO05D003143 3.7e-07 58.2 55 50.9
Potri.002G105800 Populus trichocarpa HOM05D000076 ORTHO05D003143 4.9e-07 57.8 71 43.7
HPP92_016257 Vanilla planifolia HOM05D000076 ORTHO05D003143 4.9e-07 57.8 47 57.4
Gohir.A12G084400 Gossypium hirsutum HOM05D000076 ORTHO05D003143 6.3e-07 57.4 72 45.8
vmacro21338 Vaccinium macrocarpon HOM05D000076 ORTHO05D003143 6.3e-07 57.4 72 43.1
Gorai.008G092600 Gossypium raimondii HOM05D000076 ORTHO05D003143 8.3e-07 57.0 46 52.2
Peaxi162Scf00191g00312 Petunia axillaris HOM05D000076 ORTHO05D003143 8.3e-07 57.0 63 46.0
Aqoxy6G00876 Aquilegia oxysepala HOM05D000076 ORTHO05D003143 1.1e-06 56.6 70 44.3
Ca_22707_v3 Cicer arietinum L. HOM05D000076 ORTHO05D003143 1.1e-06 56.6 70 45.7
Gohir.A11G206933 Gossypium hirsutum HOM05D000076 ORTHO05D003143 1.1e-06 56.6 73 45.2
SGA_v2.0_scaffold108G30916 Striga asiatica HOM05D000076 ORTHO05D003143 1.1e-06 56.6 69 49.3
THA.LOC104819291 Tarenaya hassleriana HOM05D000076 ORTHO05D003143 1.1e-06 56.6 64 53.1
Actinidia19239 Actinidia chinensis HOM05D000076 ORTHO05D003143 1.4e-06 56.2 67 43.3
CiPaw.07G165800 Carya illinoinensis HOM05D000076 ORTHO05D003143 1.4e-06 56.2 54 48.1
CDE01G0820 Ceratophyllum demersum HOM05D000076 ORTHO05D003143 1.4e-06 56.2 53 49.1
Gorai.003G038000 Gossypium raimondii HOM05D000076 ORTHO05D003143 1.4e-06 56.2 65 46.2
PGSC0003DMG400016201 Solanum tuberosum HOM05D000076 ORTHO05D003143 1.4e-06 56.2 67 49.3
TPR.G38983 Trifolium pratense HOM05D000076 ORTHO05D003143 1.4e-06 56.2 63 47.6
DCAR_014185 Daucus carota HOM05D000076 ORTHO05D003143 1.8e-06 55.8 65 47.7
Gohir.D03G036200 Gossypium hirsutum HOM05D000076 ORTHO05D003143 1.8e-06 55.8 65 46.2
PSO541G6401 Papaver somniferum HOM05D000076 ORTHO05D003143 1.8e-06 55.8 69 43.5
PSO675G8179 Papaver somniferum HOM05D000076 ORTHO05D003143 1.8e-06 55.8 69 43.5
Prupe.6G201400 Prunus persica HOM05D000076 ORTHO05D003143 1.8e-06 55.8 45 60.0
Sabra02G0083100 Salix brachista HOM05D000076 ORTHO05D003143 1.8e-06 55.8 71 42.3
Sopen11g005400 Solanum pennellii HOM05D000076 ORTHO05D003143 1.8e-06 55.8 63 44.4
Sed0023630 Sechium edule HOM05D000076 ORTHO05D003143 2.4e-06 55.5 45 60.0
Solyc11g010600.2 Solanum lycopersicum HOM05D000076 ORTHO05D003143 2.4e-06 55.5 63 44.4
Glyma.01G023300 Glycine max HOM05D000076 ORTHO05D003143 3.1e-06 55.1 71 46.5
Gohir.A05G219600 Gossypium hirsutum HOM05D000076 ORTHO05D003143 3.1e-06 55.1 51 51.0
Manes.02G144900 Manihot esculenta HOM05D000076 ORTHO05D003143 3.1e-06 55.1 54 44.4
TAR381G1551 Trochodendron aralioides HOM05D000076 ORTHO05D003143 3.1e-06 55.1 44 52.3
Atru.chr13.1014 Acer truncatum HOM05D000076 ORTHO05D003143 4.1e-06 54.7 52 50.0
MSTRG.15689 Avicennia marina HOM05D000076 ORTHO05D003143 4.1e-06 54.7 69 47.8
BcaC01g02775 Brassica carinata HOM05D000076 ORTHO05D003143 4.1e-06 54.7 66 42.4
C03p60580 Brassica napus HOM05D000076 ORTHO05D003143 4.1e-06 54.7 66 42.4
BolC3t18314H Brassica oleracea HOM05D000076 ORTHO05D003143 4.1e-06 54.7 66 42.4
Ca_23444_v3 Cicer arietinum L. HOM05D000076 ORTHO05D003143 4.1e-06 54.7 48 52.1
PGR102G2714 Punica granatum HOM05D000076 ORTHO05D003143 4.1e-06 54.7 76 44.7
AT4G24530 Arabidopsis thaliana HOM05D000076 ORTHO05D003143 5.4e-06 54.3 51 49.0
Gohir.A02G144400 Gossypium hirsutum HOM05D000076 ORTHO05D003143 5.4e-06 54.3 64 45.3
Psat2g083760 Pisum sativum HOM05D000076 ORTHO05D003143 5.4e-06 54.3 45 55.6
VMungo1215G3173 Vigna mungo HOM05D000076 ORTHO05D003143 5.4e-06 54.3 54 50.0
AL8G43050 Arabidopsis lyrata HOM05D000076 ORTHO05D003143 7.0e-06 53.9 65 44.6
CANSAT25G1835 Cannabis sativa HOM05D000076 ORTHO05D003143 7.0e-06 53.9 76 39.5
Duzib264G0601 Durio zibethinus HOM05D000076 ORTHO05D003143 7.0e-06 53.9 72 41.7
Lju188A2T34 Lonicera japonica HOM05D000076 ORTHO05D003143 7.0e-06 53.9 41 61.0
Medtr5g032100 Medicago truncatula HOM05D000076 ORTHO05D003143 7.0e-06 53.9 67 47.8
vmacro13006 Vaccinium macrocarpon HOM05D000076 ORTHO05D003143 7.0e-06 53.9 65 43.1
A06p32300 Brassica napus HOM05D000076 ORTHO05D003143 9.2e-06 53.5 66 40.9
BraA06t26156Z Brassica rapa HOM05D000076 ORTHO05D003143 9.2e-06 53.5 66 40.9
COL.COLO4_27354 Corchorus olitorius HOM05D000076 ORTHO05D003143 9.2e-06 53.5 47 51.1
MD15G1312400 Malus domestica HOM05D000076 ORTHO05D003143 9.2e-06 53.5 51 49.0


User provided reference genes

Program Settings