Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 6.4e-134 480.7 235 100.0
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 2.0e-111 406.0 237 85.7
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 1.7e-102 376.3 241 78.8
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 8.1e-97 357.5 238 73.5
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 3.4e-95 352.1 235 74.0
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 9.9e-95 350.5 235 73.2
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 8.4e-94 347.4 238 70.6
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 1.1e-93 347.1 237 70.5
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 1.9e-93 346.3 236 70.8
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 2.1e-92 342.8 236 70.8
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 3.5e-92 342.0 236 71.2
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 3.5e-92 342.0 236 71.2
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 6.0e-92 341.3 239 71.5
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 7.9e-92 340.9 231 71.9
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 1.3e-91 340.1 231 71.4
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 3.0e-91 339.0 223 74.0
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 3.0e-91 339.0 238 70.2
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 3.9e-91 338.6 237 70.0
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 3.9e-91 338.6 236 70.8
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 5.1e-91 338.2 236 70.8
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.1e-91 338.2 236 70.3
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 6.6e-91 337.8 236 70.3
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 6.6e-91 337.8 235 69.8
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 8.7e-91 337.4 236 69.9
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 1.1e-90 337.0 235 69.8
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.5e-90 336.7 236 69.9
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 1.9e-90 336.3 237 70.0
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.5e-90 335.9 236 69.9
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 5.6e-90 334.7 237 69.6
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 5.6e-90 334.7 235 70.2
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 7.4e-90 334.3 226 72.6
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 9.6e-90 334.0 235 70.6
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 9.6e-90 334.0 236 69.5
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 9.6e-90 334.0 239 69.9
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 9.6e-90 334.0 236 69.9
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 9.6e-90 334.0 239 68.6
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 1.3e-89 333.6 239 67.8
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 1.6e-89 333.2 223 72.2
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.8e-89 331.6 240 69.2
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 6.2e-89 331.3 236 69.1
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 1.1e-88 330.5 236 67.8
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 1.1e-88 330.5 237 67.9
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 1.4e-88 330.1 239 68.2
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 1.4e-88 330.1 235 68.5
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 1.4e-88 330.1 236 68.6
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.8e-88 329.7 240 68.8
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 3.1e-88 328.9 236 68.6
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 5.3e-88 328.2 236 67.8
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 5.3e-88 328.2 232 69.4
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 5.3e-88 328.2 232 69.4
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 1.5e-87 326.6 236 68.6
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 2.0e-87 326.2 236 68.2
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 2.6e-87 325.9 240 67.5
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 2.6e-87 325.9 226 71.7
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 2.6e-87 325.9 235 68.5
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 4.5e-87 325.1 235 68.9
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 5.8e-87 324.7 232 69.4
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 9.9e-87 323.9 219 70.8
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.9e-86 322.4 238 67.2
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 2.9e-86 322.4 238 67.2
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 4.9e-86 321.6 239 67.8
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 1.4e-85 320.1 238 68.5
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 1.9e-85 319.7 236 67.8
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 4.2e-85 318.5 238 66.4
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 2.1e-84 316.2 239 66.5
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 2.7e-84 315.8 306 57.5
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 2.7e-84 315.8 200 77.5
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 3.5e-84 315.5 236 66.5
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 3.5e-84 315.5 229 68.1
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 4.6e-84 315.1 219 69.4
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 7.9e-84 314.3 237 65.4
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 1.0e-83 313.9 236 65.7
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 1.3e-83 313.5 225 68.9
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 1.8e-83 313.2 236 67.4
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 1.8e-83 313.2 236 67.4
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 1.8e-83 313.2 239 66.5
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 3.0e-83 312.4 286 58.0
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 3.0e-83 312.4 238 65.5
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 3.9e-83 312.0 227 68.3
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 5.1e-83 311.6 227 67.4
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 5.1e-83 311.6 227 67.4
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 6.7e-83 311.2 228 66.2
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 6.7e-83 311.2 228 66.7
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 8.7e-83 310.8 225 68.9
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 3.3e-82 308.9 242 64.0
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 3.3e-82 308.9 237 64.6
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.6e-81 306.6 246 64.6
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 2.8e-81 305.8 237 63.7
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 8.1e-81 304.3 237 63.7
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 1.8e-80 303.1 195 73.3
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 1.5e-79 300.1 233 62.7
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 2.0e-79 299.7 237 63.7
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 5.8e-79 298.1 212 71.2
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.7e-78 296.6 195 72.8
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 4.9e-78 295.0 239 61.5
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 1.9e-77 293.1 232 63.8
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 5.5e-77 291.6 238 62.6
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 7.9e-76 287.7 234 60.7
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 4.3e-74 282.0 217 62.7
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 7.4e-74 281.2 195 70.3
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 4.8e-73 278.5 200 67.5
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 1.4e-72 276.9 204 66.2
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 9.3e-69 264.2 196 68.4
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 3.0e-67 259.2 194 62.9
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 1.5e-63 246.9 201 60.7
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 1.4e-61 240.4 197 63.5
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 1.4e-61 240.4 218 56.0
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 2.5e-61 239.6 265 54.0
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 3.2e-61 239.2 202 59.4
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 2.5e-58 229.6 222 51.4
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 4.5e-55 218.8 234 48.3
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 3.8e-54 215.7 220 51.8
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 4.2e-53 212.2 192 55.2
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.6e-52 210.3 143 70.6
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 3.7e-49 199.1 192 53.1
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 1.4e-48 197.2 141 68.1
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 3.2e-45 186.0 126 72.2
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 1.5e-29 134.0 209 38.3
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 1.2e-26 124.4 184 38.0
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.0e-26 123.6 90 68.9
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 4.1e-24 115.9 259 30.5
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 4.1e-24 115.9 201 36.8
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 2.8e-20 103.2 183 35.5
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 2.7e-15 86.7 51 80.4
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 9.5e-13 78.2 49 71.4
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 1.2e-10 71.2 61 54.1
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 2.0e-07 60.5 34 76.5


User provided reference genes

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