Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G1549 Erigeron canadensis HOM05D004531 ORTHO05D005484 2.0e-36 155.2 76 100.0
ECA238G4589 Erigeron canadensis HOM05D004531 ORTHO05D005484 4.4e-20 100.9 55 92.7
HanXRQChr14g0437741 Helianthus annuus HOM05D004531 ORTHO05D005484 7.1e-18 93.6 53 84.9
Lsat_1_v5_gn_2_52561 Lactuca sativa HOM05D004531 ORTHO05D005484 1.6e-17 92.4 53 83.0
TAR374G0360 Trochodendron aralioides HOM05D004531 ORTHO05D005484 2.1e-17 92.0 58 74.1
Cfa002196 Carpinus fangiana HOM05D004531 ORTHO05D005484 3.5e-17 91.3 55 76.4
MELO3C008757.2 Cucumis melo HOM05D004531 ORTHO05D005484 1.3e-16 89.4 58 72.4
CsaV3_2G009570 Cucumis sativus L. HOM05D004531 ORTHO05D005484 1.3e-16 89.4 58 72.4
Manes.11G057800 Manihot esculenta HOM05D004531 ORTHO05D005484 1.3e-16 89.4 58 70.7
FvH4_3g21660 Fragaria vesca HOM05D004531 ORTHO05D005484 1.7e-16 89.0 58 70.7
FAN11G1137 Fragaria x ananassa HOM05D004531 ORTHO05D005484 1.7e-16 89.0 58 70.7
Nitab4.5_0000646g0260 Nicotiana tabacum HOM05D004531 ORTHO05D005484 1.7e-16 89.0 58 72.4
Nitab4.5_0002805g0150 Nicotiana tabacum HOM05D004531 ORTHO05D005484 1.7e-16 89.0 58 72.4
FAN16G0044 Fragaria x ananassa HOM05D004531 ORTHO05D005484 2.3e-16 88.6 58 69.0
FAN21G3808 Fragaria x ananassa HOM05D004531 ORTHO05D005484 2.3e-16 88.6 58 69.0
FAN25G0149 Fragaria x ananassa HOM05D004531 ORTHO05D005484 2.3e-16 88.6 58 69.0
Lalb_Chr13g0291551 Lupinus albus HOM05D004531 ORTHO05D005484 3.0e-16 88.2 58 70.7
TWI77G0822 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 3.0e-16 88.2 58 72.4
Hma1.2p1_0341F.1_g130530 Hydrangea macrophylla HOM05D004531 ORTHO05D005484 3.9e-16 87.8 53 75.5
TAR636G0629 Trochodendron aralioides HOM05D004531 ORTHO05D005484 3.9e-16 87.8 61 68.9
Sed0018245 Sechium edule HOM05D004531 ORTHO05D005484 5.1e-16 87.4 58 69.0
PGSC0003DMG400008162 Solanum tuberosum HOM05D004531 ORTHO05D005484 5.1e-16 87.4 58 72.4
Haze_23723 Corylus avellana HOM05D004531 ORTHO05D005484 6.6e-16 87.0 53 75.5
Peaxi162Scf00002g10416 Petunia axillaris HOM05D004531 ORTHO05D005484 6.6e-16 87.0 64 67.2
Prupe.4G200900 Prunus persica HOM05D004531 ORTHO05D005484 6.6e-16 87.0 58 70.7
Prupe.8G106900 Prunus persica HOM05D004531 ORTHO05D005484 6.6e-16 87.0 58 70.7
Thecc.05G127100 Theobroma cacao HOM05D004531 ORTHO05D005484 6.6e-16 87.0 58 69.0
ClCG11G010890 Citrullus lanatus HOM05D004531 ORTHO05D005484 8.6e-16 86.7 58 69.0
VMungo0251G1523 Vigna mungo HOM05D004531 ORTHO05D005484 8.6e-16 86.7 58 69.0
Eucgr.A02172 Eucalyptus grandis HOM05D004531 ORTHO05D005484 1.1e-15 86.3 58 70.7
Gohir.A06G180300 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.1e-15 86.3 58 67.2
Gohir.A08G129500 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.1e-15 86.3 58 67.2
Gohir.D10G227700 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.1e-15 86.3 58 67.2
PGR042G0151 Punica granatum HOM05D004531 ORTHO05D005484 1.1e-15 86.3 58 70.7
Sabra16G0030200 Salix brachista HOM05D004531 ORTHO05D005484 1.1e-15 86.3 58 70.7
GSVIVG01029836001 Vitis vinifera HOM05D004531 ORTHO05D005484 1.1e-15 86.3 58 67.2
CAN.G641.37 Capsicum annuum HOM05D004531 ORTHO05D005484 1.5e-15 85.9 58 70.7
CiPaw.08G117500 Carya illinoinensis HOM05D004531 ORTHO05D005484 1.5e-15 85.9 58 69.0
Glyma.08G077300 Glycine max HOM05D004531 ORTHO05D005484 1.5e-15 85.9 58 70.7
Lj7A661T48 Lonicera japonica HOM05D004531 ORTHO05D005484 1.5e-15 85.9 62 64.5
Potri.016G024300 Populus trichocarpa HOM05D004531 ORTHO05D005484 1.5e-15 85.9 58 70.7
RcHm_v2.0_Chr5g0037141 Rosa chinensis HOM05D004531 ORTHO05D005484 1.5e-15 85.9 58 67.2
Sabra16G0021800 Salix brachista HOM05D004531 ORTHO05D005484 1.5e-15 85.9 58 70.7
Solyc10g079430.2 Solanum lycopersicum HOM05D004531 ORTHO05D005484 1.5e-15 85.9 58 70.7
Sopen10g030070 Solanum pennellii HOM05D004531 ORTHO05D005484 1.5e-15 85.9 58 70.7
Cpa.g.sc115.24 Carica papaya HOM05D004531 ORTHO05D005484 1.9e-15 85.5 58 67.2
MD11G1228400 Malus domestica HOM05D004531 ORTHO05D005484 1.9e-15 85.5 55 69.1
Dinv37065 Davidia involucrata HOM05D004531 ORTHO05D005484 2.5e-15 85.1 58 67.2
MD11G1228700 Malus domestica HOM05D004531 ORTHO05D005484 2.5e-15 85.1 58 67.2
MD15G1425000 Malus domestica HOM05D004531 ORTHO05D005484 2.5e-15 85.1 58 67.2
Nitab4.5_0000082g0350 Nicotiana tabacum HOM05D004531 ORTHO05D005484 3.3e-15 84.7 58 69.0
Phvul.002G203400 Phaseolus vulgaris HOM05D004531 ORTHO05D005484 3.3e-15 84.7 58 67.2
Atru.chr2.471 Acer truncatum HOM05D004531 ORTHO05D005484 5.6e-15 84.0 55 69.1
SalBow6G4182 Salvia bowleyana HOM05D004531 ORTHO05D005484 5.6e-15 84.0 58 69.0
CANSAT56G3883 Cannabis sativa HOM05D004531 ORTHO05D005484 7.3e-15 83.6 55 72.7
Gorai.011G260100 Gossypium raimondii HOM05D004531 ORTHO05D005484 1.2e-14 82.8 58 65.5
Nn5g28465 Nelumbo nucifera HOM05D004531 ORTHO05D005484 1.6e-14 82.4 58 62.1
Nitab4.5_0010736g0010 Nicotiana tabacum HOM05D004531 ORTHO05D005484 1.6e-14 82.4 58 65.5
QL09p051267 Quercus lobata HOM05D004531 ORTHO05D005484 1.6e-14 82.4 58 67.2
Duzib052G0496 Durio zibethinus HOM05D004531 ORTHO05D005484 2.1e-14 82.0 61 62.3
DCAR_020613 Daucus carota HOM05D004531 ORTHO05D005484 2.8e-14 81.6 58 69.0
Duzib248G1029 Durio zibethinus HOM05D004531 ORTHO05D005484 2.8e-14 81.6 58 63.8
MD11G1228500 Malus domestica HOM05D004531 ORTHO05D005484 2.8e-14 81.6 55 65.5
MELO3C023654.2 Cucumis melo HOM05D004531 ORTHO05D005484 3.6e-14 81.3 58 65.5
Lj6g0006960 Lotus japonicus HOM05D004531 ORTHO05D005484 3.6e-14 81.3 58 63.8
AUR62034356 Chenopodium quinoa HOM05D004531 ORTHO05D005484 4.7e-14 80.9 58 67.2
AUR62022353 Chenopodium quinoa HOM05D004531 ORTHO05D005484 6.2e-14 80.5 58 65.5
Aqoxy2G03324 Aquilegia oxysepala HOM05D004531 ORTHO05D005484 8.1e-14 80.1 61 67.2
Ciclev10010418m.g Citrus clementina HOM05D004531 ORTHO05D005484 8.1e-14 80.1 62 61.3
COL.COLO4_07074 Corchorus olitorius HOM05D004531 ORTHO05D005484 8.1e-14 80.1 58 63.8
Glyma.05G122300 Glycine max HOM05D004531 ORTHO05D005484 8.1e-14 80.1 58 67.2
Medtr4g094380 Medicago truncatula HOM05D004531 ORTHO05D005484 8.1e-14 80.1 58 62.1
Zm00001eb369240 Zea mays HOM05D004531 ORTHO05D005484 8.1e-14 80.1 58 63.8
EL10Ac9g22646 Beta vulgaris HOM05D004531 ORTHO05D005484 1.1e-13 79.7 58 63.8
Ciclev10012657m.g Citrus clementina HOM05D004531 ORTHO05D005484 1.1e-13 79.7 58 62.1
Hund15691 Selenicereus undatus HOM05D004531 ORTHO05D005484 1.1e-13 79.7 57 64.9
ClCG09G010350 Citrullus lanatus HOM05D004531 ORTHO05D005484 1.4e-13 79.3 72 55.6
MSTRG.6389 Avicennia marina HOM05D004531 ORTHO05D005484 1.8e-13 79.0 58 65.5
Cc06_g18540 Coffea canephora HOM05D004531 ORTHO05D005484 1.8e-13 79.0 58 67.2
CDE07G1261 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 2.4e-13 78.6 58 65.5
CDE07G2032 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 2.4e-13 78.6 58 65.5
arahy.Tifrunner.gnm1.ann1.8UG22X Arachis hypogaea HOM05D004531 ORTHO05D005484 3.1e-13 78.2 58 65.5
arahy.Tifrunner.gnm1.ann1.JM9XLQ Arachis hypogaea HOM05D004531 ORTHO05D005484 3.1e-13 78.2 58 65.5
HPP92_027481 Vanilla planifolia HOM05D004531 ORTHO05D005484 3.1e-13 78.2 58 60.3
Sc15g0002670 Simmondsia chinensis HOM05D004531 ORTHO05D005484 6.8e-13 77.0 59 59.3
THA.LOC104820245 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 6.8e-13 77.0 59 64.4
arahy.Tifrunner.gnm1.ann1.35U2WI Arachis hypogaea HOM05D004531 ORTHO05D005484 8.9e-13 76.6 58 63.8
EL10Ac1g01672 Beta vulgaris HOM05D004531 ORTHO05D005484 8.9e-13 76.6 58 62.1
CSS0023033 Camellia sinensis var. sinensis HOM05D004531 ORTHO05D005484 8.9e-13 76.6 58 60.3
RhsimUnG0021500 Rhododendron simsii HOM05D004531 ORTHO05D005484 1.5e-12 75.9 58 62.1
TPR.G23804 Trifolium pratense HOM05D004531 ORTHO05D005484 2.0e-12 75.5 59 62.7
Zm00001eb262530 Zea mays HOM05D000031 ORTHO05D445172 2.0e-12 75.5 52 67.3
Psat7g095600 Pisum sativum HOM05D004531 ORTHO05D005484 2.6e-12 75.1 58 60.3
SGA_v2.0_scaffold105G30334 Striga asiatica HOM05D004531 ORTHO05D005484 2.6e-12 75.1 58 63.8
SGA_v2.0_scaffold69G23138 Striga asiatica HOM05D004531 ORTHO05D005484 2.6e-12 75.1 60 65.0
Migut.J01686 Erythranthe guttata HOM05D004531 ORTHO05D005484 3.4e-12 74.7 60 65.0
vmacro07599 Vaccinium macrocarpon HOM05D004531 ORTHO05D005484 4.4e-12 74.3 58 63.8
MBI13_g30229_MAGBIO Magnolia biondii HOM05D004531 ORTHO05D005484 5.8e-12 73.9 64 60.9
BcaB02g08172 Brassica carinata HOM05D004531 ORTHO05D005484 7.6e-12 73.6 58 56.9
Ca_18320_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 9.9e-12 73.2 55 60.0
RhsimUnG0117400 Rhododendron simsii HOM05D004531 ORTHO05D005484 1.7e-11 72.4 53 66.0
Os01g0810000 Oryza sativa ssp. japonica HOM05D004531 ORTHO05D005484 3.8e-11 71.2 58 58.6
CDE07G0548 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 4.9e-11 70.9 52 65.4
PSO210G4508 Papaver somniferum HOM05D004531 ORTHO05D005484 4.9e-11 70.9 58 60.3
Aa31LG3G11700 Aethionema arabicum HOM05D004531 ORTHO05D005484 6.4e-11 70.5 59 61.0
AL5G42600 Arabidopsis lyrata HOM05D004531 ORTHO05D005484 6.4e-11 70.5 61 55.7
BcaC02g10151 Brassica carinata HOM05D004531 ORTHO05D005484 6.4e-11 70.5 58 55.2
A04p01660 Brassica napus HOM05D004531 ORTHO05D005484 6.4e-11 70.5 58 55.2
A09p52640 Brassica napus HOM05D004531 ORTHO05D005484 6.4e-11 70.5 58 55.2
C08p35370 Brassica napus HOM05D004531 ORTHO05D005484 6.4e-11 70.5 58 55.2
BolC8t51130H Brassica oleracea HOM05D004531 ORTHO05D005484 6.4e-11 70.5 58 55.2
BraA09t40693Z Brassica rapa HOM05D004531 ORTHO05D005484 6.4e-11 70.5 58 55.2
BcaC07g42771 Brassica carinata HOM05D004531 ORTHO05D005484 8.4e-11 70.1 58 55.2
C04p32210 Brassica napus HOM05D004531 ORTHO05D005484 1.4e-10 69.3 58 53.4
CsaV3_7G024290 Cucumis sativus L. HOM05D004531 ORTHO05D005484 1.9e-10 68.9 58 60.3
ATR1096G053 Amborella trichopoda HOM05D004531 ORTHO05D005484 3.2e-10 68.2 53 56.6
CARHR170680 Cardamine hirsuta HOM05D004531 ORTHO05D005484 3.2e-10 68.2 58 55.2
AT3G60360 Arabidopsis thaliana HOM05D004531 ORTHO05D005484 4.1e-10 67.8 58 55.2
Carub.0005s2711 Capsella rubella HOM05D004531 ORTHO05D005484 5.4e-10 67.4 58 53.4
Thhalv10006222m.g Eutrema salsugineum HOM05D004531 ORTHO05D005484 5.4e-10 67.4 58 53.4
TWI38G0613 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 7.1e-10 67.0 45 66.7
Sp5g02860 Schrenkiella parvula HOM05D004531 ORTHO05D005484 1.2e-09 66.2 58 53.4
SpUn0080_0040 Schrenkiella parvula HOM05D004531 ORTHO05D005484 1.2e-09 66.2 58 53.4
PSO210G2223 Papaver somniferum HOM05D004531 ORTHO05D005484 2.1e-09 65.5 58 55.2
unitig_746.g26802 Utricularia gibba HOM05D004531 ORTHO05D005484 3.5e-09 64.7 58 56.9
Hund22289 Selenicereus undatus HOM05D004531 ORTHO05D005484 6.0e-09 63.9 54 53.7
SMO367G0994 Selaginella moellendorffii HOM05D004531 ORTHO05D005484 3.9e-08 61.2 62 50.0
BraA04t15890Z Brassica rapa HOM05D004531 ORTHO05D005484 6.6e-08 60.5 52 51.9
Mapoly0074s0052 Marchantia polymorpha HOM05D004531 ORTHO05D005484 8.7e-08 60.1 58 51.7
AagrBONN_evm.TU.Sc2ySwM_228.1021 Anthoceros agrestis HOM05D004531 ORTHO05D005484 7.3e-07 57.0 74 43.2
CBR_g26482 Chara braunii HOM05D004531 ORTHO05D005484 9.6e-07 56.6 52 51.9


User provided reference genes

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