Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G1523 Erigeron canadensis HOM05D007093 ORTHO05D008910 2.2e-259 898.7 541 100.0
Lsat_1_v5_gn_2_87781 Lactuca sativa HOM05D007093 ORTHO05D008910 3.7e-185 652.1 544 73.5
HanXRQChr07g0199471 Helianthus annuus HOM05D007093 ORTHO05D008910 5.2e-147 525.4 492 70.9
Dinv11483 Davidia involucrata HOM05D007093 ORTHO05D008910 2.0e-98 364.0 444 56.8
CSS0026118 Camellia sinensis var. sinensis HOM05D007093 ORTHO05D008910 1.7e-94 350.9 442 55.4
SalBow1G5933 Salvia bowleyana HOM05D007093 ORTHO05D008910 1.9e-93 347.4 448 55.8
Ciclev10011344m.g Citrus clementina HOM05D007093 ORTHO05D008910 3.2e-88 330.1 442 54.8
Haze_14367 Corylus avellana HOM05D007093 ORTHO05D008910 1.2e-87 328.2 442 53.8
Cfa007712 Carpinus fangiana HOM05D007093 ORTHO05D008910 1.6e-87 327.8 442 54.1
QL09p029458 Quercus lobata HOM05D007093 ORTHO05D008910 3.5e-87 326.6 446 52.9
Atru.chr6.1376 Acer truncatum HOM05D007093 ORTHO05D008910 1.0e-86 325.1 438 54.3
CiPaw.04G051100 Carya illinoinensis HOM05D007093 ORTHO05D008910 1.3e-86 324.7 441 53.5
Gohir.D09G010300 Gossypium hirsutum HOM05D007093 ORTHO05D008910 5.1e-86 322.8 444 53.2
MELO3C022059.2 Cucumis melo HOM05D007093 ORTHO05D008910 8.7e-86 322.0 445 52.6
Gohir.A09G011300 Gossypium hirsutum HOM05D007093 ORTHO05D008910 3.3e-85 320.1 444 52.9
Gorai.006G011900 Gossypium raimondii HOM05D007093 ORTHO05D008910 4.3e-85 319.7 444 52.9
Rhsim10G0045200 Rhododendron simsii HOM05D007093 ORTHO05D008910 2.1e-84 317.4 437 53.1
vmacro19123 Vaccinium macrocarpon HOM05D007093 ORTHO05D008910 2.1e-84 317.4 428 54.0
MSTRG.3018 Avicennia marina HOM05D007093 ORTHO05D008910 1.8e-83 314.3 444 53.2
TAR622G0743 Trochodendron aralioides HOM05D007093 ORTHO05D008910 1.8e-83 314.3 433 54.7
QL09p029436 Quercus lobata HOM05D007093 ORTHO05D008910 4.0e-83 313.2 446 47.5
AUR62042568 Chenopodium quinoa HOM05D007093 ORTHO05D008910 9.0e-83 312.0 467 50.5
Sp2g17890 Schrenkiella parvula HOM05D007093 ORTHO05D008910 3.4e-82 310.1 454 50.9
TWI60G1187 Tripterygium wilfordii HOM05D007093 ORTHO05D008910 2.2e-81 307.4 441 48.3
MD09G1077000 Malus domestica HOM05D007093 ORTHO05D008910 4.9e-81 306.2 441 52.8
Sc10g0003260 Simmondsia chinensis HOM05D007093 ORTHO05D008910 2.4e-80 303.9 441 52.2
RcHm_v2.0_Chr2g0164431 Rosa chinensis HOM05D007093 ORTHO05D008910 4.2e-80 303.1 446 51.6
Cpa.g.sc14.149 Carica papaya HOM05D007093 ORTHO05D008910 9.3e-80 302.0 455 51.4
CAN.G206.202 Capsicum annuum HOM05D007093 ORTHO05D008910 1.6e-79 301.2 539 45.5
FAN09G1105 Fragaria x ananassa HOM05D007093 ORTHO05D008910 1.6e-79 301.2 445 51.5
Carub.0005s0800 Capsella rubella HOM05D007093 ORTHO05D008910 2.1e-79 300.8 452 50.2
CARHR153970 Cardamine hirsuta HOM05D007093 ORTHO05D008910 2.1e-79 300.8 456 50.4
FvH4_6g46090 Fragaria vesca HOM05D007093 ORTHO05D008910 3.5e-79 300.1 446 51.8
Cc07_g04020 Coffea canephora HOM05D007093 ORTHO05D008910 7.9e-79 298.9 441 51.7
DCAR_005548 Daucus carota HOM05D007093 ORTHO05D008910 1.3e-78 298.1 388 55.7
FAN02G0988 Fragaria x ananassa HOM05D007093 ORTHO05D008910 1.8e-78 297.7 445 51.0
Thhalv10003982m.g Eutrema salsugineum HOM05D007093 ORTHO05D008910 5.1e-78 296.2 454 49.3
Zm00001eb008430 Zea mays HOM05D007093 ORTHO05D008910 6.7e-78 295.8 439 49.9
AL5G19290 Arabidopsis lyrata HOM05D007093 ORTHO05D008910 1.1e-77 295.0 468 48.9
Potri.017G090500 Populus trichocarpa HOM05D007093 ORTHO05D008910 1.1e-77 295.0 445 51.7
CANSAT64G0836 Cannabis sativa HOM05D007093 ORTHO05D008910 1.5e-77 294.7 449 51.0
FAN05G3563 Fragaria x ananassa HOM05D007093 ORTHO05D008910 1.3e-76 291.6 445 51.0
Peaxi162Scf00166g00640 Petunia axillaris HOM05D007093 ORTHO05D008910 1.6e-76 291.2 442 51.1
BcaB07g30086 Brassica carinata HOM05D007093 ORTHO05D008910 8.2e-76 288.9 441 49.9
AUR62018158 Chenopodium quinoa HOM05D007093 ORTHO05D008910 8.2e-76 288.9 467 48.2
PSO017G2846 Papaver somniferum HOM05D007093 ORTHO05D008910 3.4e-74 283.5 460 48.3
PSO478G5205 Papaver somniferum HOM05D007093 ORTHO05D008910 7.6e-74 282.3 458 48.0
Psat3g194440 Pisum sativum HOM05D007093 ORTHO05D008910 7.6e-74 282.3 442 49.1
Manes.02G051500 Manihot esculenta HOM05D007093 ORTHO05D008910 1.0e-73 282.0 442 49.5
Sed0021178 Sechium edule HOM05D007093 ORTHO05D008910 6.5e-73 279.3 449 49.2
Ah.10g031960 Amaranthus hybridus HOM05D007093 ORTHO05D008910 1.9e-72 277.7 440 50.7
Nitab4.5_0000565g0100 Nicotiana tabacum HOM05D007093 ORTHO05D008910 1.9e-72 277.7 442 49.8
Sopen02g033330 Solanum pennellii HOM05D007093 ORTHO05D008910 2.5e-72 277.3 448 49.3
AT3G29290 Arabidopsis thaliana HOM05D007093 ORTHO05D008910 1.2e-71 275.0 494 45.1
Phvul.008G024300 Phaseolus vulgaris HOM05D007093 ORTHO05D008910 1.6e-71 274.6 435 49.0
Lj4A116G82 Lonicera japonica HOM05D007093 ORTHO05D008910 3.5e-71 273.5 380 53.9
Nn4g23352 Nelumbo nucifera HOM05D007093 ORTHO05D008910 4.6e-71 273.1 391 53.5
VMungo1383G0771 Vigna mungo HOM05D007093 ORTHO05D008910 1.0e-70 271.9 443 47.4
SGA_v2.0_scaffold52G19185 Striga asiatica HOM05D007093 ORTHO05D008910 1.8e-70 271.2 445 48.1
Sabra17G0079700 Salix brachista HOM05D007093 ORTHO05D008910 3.9e-70 270.0 390 54.1
Medtr7g017610 Medicago truncatula HOM05D007093 ORTHO05D008910 5.1e-70 269.6 441 48.8
PGSC0003DMG400001354 Solanum tuberosum HOM05D007093 ORTHO05D008910 1.1e-67 261.9 442 48.4
TPR.G3254 Trifolium pratense HOM05D007093 ORTHO05D008910 1.4e-67 261.5 442 46.8
Actinidia07826 Actinidia chinensis HOM05D007093 ORTHO05D008910 2.4e-67 260.8 407 51.6
Ca_06961_v3 Cicer arietinum L. HOM05D007093 ORTHO05D008910 6.9e-67 259.2 439 48.3
Lj1g0021235 Lotus japonicus HOM05D007093 ORTHO05D008910 1.2e-66 258.5 436 46.8
Migut.H00649 Erythranthe guttata HOM05D007093 ORTHO05D008910 4.5e-66 256.5 439 47.8
PGR042G3371 Punica granatum HOM05D007093 ORTHO05D008910 1.1e-64 251.9 484 45.7
Solyc02g088600.4 Solanum lycopersicum HOM05D007093 ORTHO05D008910 5.5e-64 249.6 448 46.9
Glyma.18G276600 Glycine max HOM05D007093 ORTHO05D008910 7.2e-64 249.2 440 46.4
ClCG11G005040 Citrullus lanatus HOM05D007093 ORTHO05D008910 1.2e-63 248.4 445 46.5
Oeu000638.1 Olea europaea HOM05D007093 ORTHO05D008910 1.2e-63 248.4 390 50.8
Nitab4.5_0008213g0020 Nicotiana tabacum HOM05D007093 ORTHO05D008910 2.7e-63 247.3 442 46.6
Aa31LG10G7310 Aethionema arabicum HOM05D007093 ORTHO05D006741 4.6e-63 246.5 453 46.1
Prupe.3G247100 Prunus persica HOM05D007093 ORTHO05D008910 7.9e-63 245.7 441 46.9
Glyma.08G254100 Glycine max HOM05D007093 ORTHO05D008910 1.4e-62 245.0 440 46.1
unitig_899.g15158 Utricularia gibba HOM05D007093 ORTHO05D008910 5.7e-61 239.6 491 32.4
Lalb_Chr10g0092581 Lupinus albus HOM05D007093 ORTHO05D008910 1.8e-59 234.6 442 45.2
EL10Ac2g03091 Beta vulgaris HOM05D007093 ORTHO05D008910 3.1e-59 233.8 438 45.9
C02p55490 Brassica napus HOM05D007093 ORTHO05D008910 4.5e-58 229.9 382 36.1
BolC2t11605H Brassica oleracea HOM05D007093 ORTHO05D008910 4.5e-58 229.9 382 36.1
Eucgr.J01427 Eucalyptus grandis HOM05D007093 ORTHO05D008910 4.5e-58 229.9 407 47.2
BcaC06g33684 Brassica carinata HOM05D007093 ORTHO05D008910 1.9e-56 224.6 455 43.7
arahy.Tifrunner.gnm1.ann1.H8YVTX Arachis hypogaea HOM05D007093 ORTHO05D008910 5.5e-56 223.0 458 44.3
C07p38180 Brassica napus HOM05D007093 ORTHO05D008910 2.1e-55 221.1 455 43.5
arahy.Tifrunner.gnm1.ann1.T191C4 Arachis hypogaea HOM05D007093 ORTHO05D008910 2.3e-54 217.6 490 42.4
GSVIVG01011494001 Vitis vinifera HOM05D007093 ORTHO05D008910 5.1e-54 216.5 443 45.6
Duzib147G1133 Durio zibethinus HOM05D007093 ORTHO05D008910 5.7e-53 213.0 444 44.6
BolC7t44340H Brassica oleracea HOM05D007093 ORTHO05D008910 2.2e-52 211.1 455 40.9
ATR0064G018 Amborella trichopoda HOM05D007093 ORTHO05D008910 4.7e-47 193.4 441 42.6
Thecc.04G091300 Theobroma cacao HOM05D007093 ORTHO05D008910 2.3e-46 191.0 472 41.9
COL.COLO4_21381 Corchorus olitorius HOM05D007093 ORTHO05D008910 3.1e-43 180.6 411 43.1
THA.LOC104805501 Tarenaya hassleriana HOM05D007093 ORTHO05D008910 1.6e-42 178.3 445 42.0
C02p55430 Brassica napus HOM05D007093 ORTHO05D008910 5.9e-42 176.4 169 50.3
BolC2t11599H Brassica oleracea HOM05D007093 ORTHO05D008910 5.9e-42 176.4 169 50.3
CsaV3_5G038790 Cucumis sativus L. HOM05D007093 ORTHO05D008910 3.0e-38 164.1 391 43.2
SEGI_28807 Sequoiadendron giganteum HOM05D007093 ORTHO05D008910 2.8e-36 157.5 396 40.7
A06p39990 Brassica napus HOM05D007093 ORTHO05D008910 8.2e-36 156.0 455 36.9
BraA06t26914Z Brassica rapa HOM05D007093 ORTHO05D008910 8.2e-36 156.0 455 36.9
Zm00001eb408510 Zea mays HOM05D007093 ORTHO05D008910 9.4e-32 142.5 204 37.3
BcaC03g17570 Brassica carinata HOM05D007093 ORTHO05D008910 2.1e-31 141.4 310 31.6
Os03g0211600 Oryza sativa ssp. japonica HOM05D007093 ORTHO05D008910 3.6e-31 140.6 209 37.8
CDE10G0932 Ceratophyllum demersum HOM05D007093 ORTHO05D008910 1.3e-28 132.1 229 34.1
RcHm_v2.0_Chr2g0164471 Rosa chinensis HOM05D007093 ORTHO05D008910 1.1e-16 92.4 87 56.3
A02p36520 Brassica napus HOM05D007093 ORTHO05D008910 3.6e-07 60.8 95 37.9
BraA02t08648Z Brassica rapa HOM05D007093 ORTHO05D008910 3.6e-07 60.8 95 37.9
Sp6g29030 Schrenkiella parvula HOM05D000424 ORTHO05D000355 4.7e-07 60.5 162 25.3
HPP92_004136 Vanilla planifolia HOM05D003177 ORTHO05D003481 1.8e-06 58.5 166 23.5


User provided reference genes

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