Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G1260 Erigeron canadensis HOM05D005652 ORTHO05D007300 1.3e-67 259.6 131 100.0
Nitab4.5_0000943g0120 Nicotiana tabacum HOM05D005652 ORTHO05D007300 2.3e-40 169.1 87 96.6
Cc06_g19090 Coffea canephora HOM05D005652 ORTHO05D007300 3.0e-40 168.7 87 96.6
Lsat_1_v5_gn_5_65281 Lactuca sativa HOM05D005652 ORTHO05D007300 3.0e-40 168.7 87 96.6
MSTRG.22423 Avicennia marina HOM05D005652 ORTHO05D007300 6.6e-40 167.5 86 96.5
HanXRQChr14g0432351 Helianthus annuus HOM05D005652 ORTHO05D007300 8.7e-40 167.2 87 97.7
Nitab4.5_0000030g0080 Nicotiana tabacum HOM05D005652 ORTHO05D007300 8.7e-40 167.2 97 89.7
Hund16832 Selenicereus undatus HOM05D005652 ORTHO05D007300 8.7e-40 167.2 87 94.3
CiPaw.05G226800 Carya illinoinensis HOM05D005652 ORTHO05D007300 1.5e-39 166.4 87 95.4
Sc23g0000830 Simmondsia chinensis HOM05D005652 ORTHO05D007300 1.5e-39 166.4 87 95.4
ClCG03G009400 Citrullus lanatus HOM05D005652 ORTHO05D007300 1.9e-39 166.0 85 96.5
MELO3C003038.2 Cucumis melo HOM05D005652 ORTHO05D007300 1.9e-39 166.0 85 96.5
CsaV3_5G023210 Cucumis sativus L. HOM05D005652 ORTHO05D007300 1.9e-39 166.0 85 96.5
PGR042G1865 Punica granatum HOM05D005652 ORTHO05D007300 1.9e-39 166.0 85 96.5
Sed0000902 Sechium edule HOM05D005652 ORTHO05D007300 1.9e-39 166.0 85 96.5
Oeu050889.1 Olea europaea HOM05D005652 ORTHO05D007300 2.5e-39 165.6 84 97.6
Aa31LG4G7830 Aethionema arabicum HOM05D005652 ORTHO05D007300 3.3e-39 165.2 83 97.6
AT1G77710 Arabidopsis thaliana HOM05D005652 ORTHO05D007300 3.3e-39 165.2 83 97.6
BcaB02g07127 Brassica carinata HOM05D005652 ORTHO05D007300 3.3e-39 165.2 83 97.6
BcaC03g15763 Brassica carinata HOM05D005652 ORTHO05D007300 3.3e-39 165.2 83 97.6
BcaC08g45458 Brassica carinata HOM05D005652 ORTHO05D007300 3.3e-39 165.2 83 97.6
A07p27870 Brassica napus HOM05D005652 ORTHO05D007300 3.3e-39 165.2 83 97.6
C06p30860 Brassica napus HOM05D005652 ORTHO05D007300 3.3e-39 165.2 83 97.6
BolC6t38248H Brassica oleracea HOM05D005652 ORTHO05D007300 3.3e-39 165.2 83 97.6
BraA07t30426Z Brassica rapa HOM05D005652 ORTHO05D007300 3.3e-39 165.2 83 97.6
Carub.0002s2459 Capsella rubella HOM05D005652 ORTHO05D007300 3.3e-39 165.2 83 97.6
CARHR071220 Cardamine hirsuta HOM05D005652 ORTHO05D007300 3.3e-39 165.2 83 97.6
Thhalv10019370m.g Eutrema salsugineum HOM05D005652 ORTHO05D007300 3.3e-39 165.2 83 97.6
Sp5g32880 Schrenkiella parvula HOM05D005652 ORTHO05D007300 3.3e-39 165.2 83 97.6
PGSC0003DMG400030853 Solanum tuberosum HOM05D005652 ORTHO05D007300 3.3e-39 165.2 98 87.8
AL2G37930 Arabidopsis lyrata HOM05D005652 ORTHO05D007300 4.3e-39 164.9 87 95.4
BcaB05g25069 Brassica carinata HOM05D005652 ORTHO05D007300 4.3e-39 164.9 87 95.4
Dinv27358 Davidia involucrata HOM05D005652 ORTHO05D007300 4.3e-39 164.9 86 94.2
MBI09_g06382_MAGBIO Magnolia biondii HOM05D005652 ORTHO05D007300 4.3e-39 164.9 87 96.6
Oeu050252.1 Olea europaea HOM05D005652 ORTHO05D007300 4.3e-39 164.9 86 94.2
Potri.002G087200 Populus trichocarpa HOM05D005652 ORTHO05D007300 4.3e-39 164.9 91 93.4
Sabra02G0068700 Salix brachista HOM05D005652 ORTHO05D007300 4.3e-39 164.9 91 93.4
Nitab4.5_0013867g0020 Nicotiana tabacum HOM05D005652 ORTHO05D007300 5.6e-39 164.5 93 88.2
Peaxi162Scf00408g00839 Petunia axillaris HOM05D005652 ORTHO05D007300 5.6e-39 164.5 87 96.6
SalBow7G3105 Salvia bowleyana HOM05D005652 ORTHO05D007300 5.6e-39 164.5 91 92.3
TWI12G1472 Tripterygium wilfordii HOM05D005652 ORTHO05D007300 5.6e-39 164.5 87 96.6
Hma1.2p1_0009F.1_g006210 Hydrangea macrophylla HOM05D005652 ORTHO05D007300 7.3e-39 164.1 87 96.6
CDE06G1598 Ceratophyllum demersum HOM05D005652 ORTHO05D007300 9.6e-39 163.7 83 97.6
CDE08G1473 Ceratophyllum demersum HOM05D005652 ORTHO05D007300 9.6e-39 163.7 83 97.6
Ciclev10002945m.g Citrus clementina HOM05D005652 ORTHO05D007300 9.6e-39 163.7 83 97.6
Duzib041G0199 Durio zibethinus HOM05D005652 ORTHO05D007300 9.6e-39 163.7 83 97.6
Duzib093G1773 Durio zibethinus HOM05D005652 ORTHO05D007300 9.6e-39 163.7 83 97.6
Migut.N03303 Erythranthe guttata HOM05D005652 ORTHO05D007300 9.6e-39 163.7 86 94.2
Glyma.14G163800 Glycine max HOM05D005652 ORTHO05D007300 9.6e-39 163.7 83 97.6
Gohir.A06G041900 Gossypium hirsutum HOM05D005652 ORTHO05D007300 9.6e-39 163.7 83 97.6
Gohir.D06G042900 Gossypium hirsutum HOM05D005652 ORTHO05D007300 9.6e-39 163.7 83 97.6
Gorai.005G091100 Gossypium raimondii HOM05D005652 ORTHO05D007300 9.6e-39 163.7 83 97.6
Gorai.010G048100 Gossypium raimondii HOM05D005652 ORTHO05D007300 9.6e-39 163.7 83 97.6
Lj1g0016776 Lotus japonicus HOM05D005652 ORTHO05D007300 9.6e-39 163.7 83 97.6
Potri.005G173800 Populus trichocarpa HOM05D005652 ORTHO05D007300 9.6e-39 163.7 91 92.3
Thecc.08G119900 Theobroma cacao HOM05D005652 ORTHO05D007300 9.6e-39 163.7 83 97.6
TWI56G0667 Tripterygium wilfordii HOM05D005652 ORTHO05D007300 9.6e-39 163.7 85 95.3
Atru.chr13.1343 Acer truncatum HOM05D005652 ORTHO05D007300 1.3e-38 163.3 83 97.6
CANSAT54G2625 Cannabis sativa HOM05D005652 ORTHO05D007300 1.3e-38 163.3 83 97.6
FAN20G1151 Fragaria x ananassa HOM05D005652 ORTHO05D007300 1.3e-38 163.3 83 97.6
FAN24G1202 Fragaria x ananassa HOM05D000102 ORTHO05D003793 1.3e-38 163.3 83 97.6
FAN27G1241 Fragaria x ananassa HOM05D005652 ORTHO05D007300 1.3e-38 163.3 83 97.6
Glyma.04G252400 Glycine max HOM05D005652 ORTHO05D007300 1.3e-38 163.3 83 97.6
Glyma.06G110100 Glycine max HOM05D005652 ORTHO05D007300 1.3e-38 163.3 83 97.6
Lalb_Chr08g0241571 Lupinus albus HOM05D005652 ORTHO05D007300 1.3e-38 163.3 83 97.6
Lalb_Chr23g0270881 Lupinus albus HOM05D005652 ORTHO05D007300 1.3e-38 163.3 83 97.6
MD08G1169400 Malus domestica HOM05D005652 ORTHO05D007300 1.3e-38 163.3 83 97.6
MD15G1356000 Malus domestica HOM05D005652 ORTHO05D007300 1.3e-38 163.3 83 97.6
Nn5g28127 Nelumbo nucifera HOM05D005652 ORTHO05D007300 1.3e-38 163.3 82 98.8
Phvul.009G121900 Phaseolus vulgaris HOM05D005652 ORTHO05D007300 1.3e-38 163.3 83 97.6
RcHm_v2.0_Chr6g0294951 Rosa chinensis HOM05D005652 ORTHO05D007300 1.3e-38 163.3 83 97.6
Hund27043 Selenicereus undatus HOM05D005652 ORTHO05D007300 1.3e-38 163.3 84 95.2
THA.LOC104813142 Tarenaya hassleriana HOM05D005652 ORTHO05D007300 1.3e-38 163.3 83 97.6
THA.LOC104817112 Tarenaya hassleriana HOM05D005652 ORTHO05D007300 1.3e-38 163.3 83 97.6
GSVIVG01008919001 Vitis vinifera HOM05D005652 ORTHO05D007300 1.3e-38 163.3 82 98.8
CSS0012578 Camellia sinensis var. sinensis HOM05D005652 ORTHO05D007300 1.6e-38 162.9 87 95.4
Medtr5g059210 Medicago truncatula HOM05D005652 ORTHO05D007300 1.6e-38 162.9 87 95.4
Psat2g096080 Pisum sativum HOM05D005652 ORTHO05D007300 1.6e-38 162.9 87 95.4
Solyc08g075780.4 Solanum lycopersicum HOM05D005652 ORTHO05D007300 1.6e-38 162.9 98 86.7
Zm00001eb140360 Zea mays HOM05D005652 ORTHO05D007300 1.6e-38 162.9 86 91.9
Aqoxy6G01736 Aquilegia oxysepala HOM05D005652 ORTHO05D007300 2.1e-38 162.5 83 96.4
arahy.Tifrunner.gnm1.ann1.AJPJ4J Arachis hypogaea HOM05D005652 ORTHO05D007300 2.1e-38 162.5 87 95.4
EL10Ac1g00017 Beta vulgaris HOM05D005652 ORTHO05D007300 2.1e-38 162.5 90 92.2
Manes.18G074500 Manihot esculenta HOM05D005652 ORTHO05D007300 2.1e-38 162.5 86 94.2
Peaxi162Scf00876g00433 Petunia axillaris HOM05D005652 ORTHO05D007300 2.1e-38 162.5 97 87.6
Ah.05g172270 Amaranthus hybridus HOM05D005652 ORTHO05D007300 2.8e-38 162.2 91 91.2
FvH4_2g26390 Fragaria vesca HOM05D005652 ORTHO05D007300 2.8e-38 162.2 83 96.4
Prupe.1G503300 Prunus persica HOM05D005652 ORTHO05D007300 2.8e-38 162.2 83 96.4
Solyc12g096120.2 Solanum lycopersicum HOM05D005652 ORTHO05D007300 2.8e-38 162.2 91 91.2
Sopen12g032000 Solanum pennellii HOM05D005652 ORTHO05D007300 2.8e-38 162.2 91 91.2
PGSC0003DMG400029291 Solanum tuberosum HOM05D005652 ORTHO05D007300 2.8e-38 162.2 91 91.2
TAR376G0464 Trochodendron aralioides HOM05D005652 ORTHO05D007300 2.8e-38 162.2 82 97.6
unitig_37.g12684 Utricularia gibba HOM05D005652 ORTHO05D007300 2.8e-38 162.2 84 95.2
Ca_19025_v3 Cicer arietinum L. HOM05D005652 ORTHO05D007300 3.6e-38 161.8 81 98.8
Ca_26775_v3 Cicer arietinum L. HOM05D005652 ORTHO05D007300 3.6e-38 161.8 81 98.8
Gohir.A02G074200 Gossypium hirsutum HOM05D005652 ORTHO05D007300 3.6e-38 161.8 83 96.4
TPR.G8501 Trifolium pratense HOM05D005652 ORTHO05D007300 3.6e-38 161.8 87 94.3
ATR0041G005 Amborella trichopoda HOM05D005652 ORTHO05D007300 6.2e-38 161.0 81 98.8
Nitab4.5_0014082g0020 Nicotiana tabacum HOM05D005652 ORTHO05D007300 8.1e-38 160.6 91 91.2
arahy.Tifrunner.gnm1.ann1.KZ1VTZ Arachis hypogaea HOM05D005652 ORTHO05D007300 1.1e-37 160.2 87 94.3
Gohir.D02G081400 Gossypium hirsutum HOM05D005652 ORTHO05D007300 1.1e-37 160.2 83 96.4
CAN.G1483.5 Capsicum annuum HOM05D005652 ORTHO05D007300 1.4e-37 159.8 80 98.8
PSO170G5049 Papaver somniferum HOM05D005652 ORTHO05D007300 1.4e-37 159.8 82 96.3
PSO528G0083 Papaver somniferum HOM05D005652 ORTHO05D007300 1.4e-37 159.8 82 96.3
Pp3c6_16720 Physcomitrium patens HOM05D005652 ORTHO05D007300 4.0e-37 158.3 82 95.1
MSTRG.1473 Avicennia marina HOM05D005652 ORTHO05D007300 6.9e-37 157.5 79 98.7
Eucgr.F03755 Eucalyptus grandis HOM05D005652 ORTHO05D007300 6.9e-37 157.5 79 98.7
SGA_v2.0_scaffold24G10489 Striga asiatica HOM05D005652 ORTHO05D007300 6.9e-37 157.5 79 98.7
CBR_g44443 Chara braunii HOM05D005652 ORTHO05D007300 9.0e-37 157.1 87 89.7
Mapoly0081s0039 Marchantia polymorpha HOM05D005652 ORTHO05D007300 9.0e-37 157.1 82 93.9
Os01g0962400 Oryza sativa ssp. japonica HOM05D005652 ORTHO05D007300 9.0e-37 157.1 80 96.2
AagrBONN_evm.TU.Sc2ySwM_362.1619 Anthoceros agrestis HOM05D005652 ORTHO05D007300 1.5e-36 156.4 82 92.7
Haze_00495 Corylus avellana HOM05D000102 ORTHO05D003793 1.5e-36 156.4 79 97.5
Migut.C01167 Erythranthe guttata HOM05D005652 ORTHO05D007300 1.3e-35 153.3 78 97.4
SMO147G0269 Selaginella moellendorffii HOM05D005652 ORTHO05D007300 8.4e-35 150.6 81 91.4
FAN15G0151 Fragaria x ananassa HOM05D000102 ORTHO05D003793 9.3e-34 147.1 107 74.8
Actinidia02604 Actinidia chinensis HOM05D005652 ORTHO05D007300 2.7e-33 145.6 99 78.8
Oeu026729.1 Olea europaea HOM05D005652 ORTHO05D007300 6.9e-29 131.0 69 94.2
Haze_27250 Corylus avellana HOM05D005652 ORTHO05D007300 1.2e-28 130.2 78 78.2
QL09p036189 Quercus lobata HOM05D005652 ORTHO05D007300 1.5e-28 129.8 70 95.7
PRCOL_00001930 Prasinoderma coloniale HOM05D005652 ORTHO05D007300 2.2e-27 125.9 79 83.5
SalBow7G1395 Salvia bowleyana HOM05D005652 ORTHO05D007300 4.9e-27 124.8 73 89.0
CAN.G947.38 Capsicum annuum HOM05D005652 ORTHO05D007300 1.9e-26 122.9 69 88.4
AUR62023629 Chenopodium quinoa HOM05D000102 ORTHO05D003793 1.9e-26 122.9 61 98.4
Rhsim11G0066600 Rhododendron simsii HOM05D005652 ORTHO05D007300 1.9e-26 122.9 61 98.4
Glyma.13G082800 Glycine max HOM05D005652 ORTHO05D007300 2.7e-25 119.0 61 95.1
HPP92_028057 Vanilla planifolia HOM05D005652 ORTHO05D007300 6.0e-25 117.9 84 76.2
Cpa.g.sc36.14 Carica papaya HOM05D005652 ORTHO05D007300 8.1e-22 107.5 106 61.3
AUR62004713 Chenopodium quinoa HOM05D005652 ORTHO05D007300 2.4e-21 105.9 57 91.2
COL.COLO4_38344 Corchorus olitorius HOM05D005652 ORTHO05D007300 6.9e-21 104.4 54 96.3
Oeu062544.1 Olea europaea HOM05D005652 ORTHO05D007300 1.3e-19 100.1 62 85.5
BraA02t07181Z Brassica rapa HOM05D005652 ORTHO05D007300 1.6e-17 93.2 61 80.3
Actinidia13808 Actinidia chinensis HOM05D005652 ORTHO05D007300 2.7e-17 92.4 50 90.0
Sed0022236 Sechium edule HOM05D005652 ORTHO05D007300 6.0e-17 91.3 87 63.2
BolC2t09520H Brassica oleracea HOM05D005652 ORTHO05D007300 1.5e-15 86.7 42 95.2
AagrBONN_evm.TU.Sc2ySwM_344.240 Anthoceros agrestis HOM05D005652 ORTHO05D007300 2.2e-11 72.8 42 83.3
ECA236G1359 Erigeron canadensis HOM05D000846 ORTHO05D006755 2.1e-09 66.2 58 58.6
ECA233G1235 Erigeron canadensis HOM05D015607 ORTHO05D009086 7.9e-09 64.3 56 57.1
ECA238G4181 Erigeron canadensis HOM05D000022 ORTHO05D002153 7.9e-09 64.3 70 50.0
TAR381G0412 Trochodendron aralioides HOM05D000102 ORTHO05D003793 2.3e-08 62.8 32 93.8
ECA240G4508 Erigeron canadensis HOM05D007602 ORTHO05D009086 3.9e-08 62.0 41 70.7
ECA236G4360 Erigeron canadensis HOM05D015607 ORTHO05D009086 6.7e-08 61.2 40 75.0
ECA246G0522 Erigeron canadensis HOM05D005001 ORTHO05D005796 6.7e-08 61.2 40 72.5
ECA240G2381 Erigeron canadensis HOM05D000001 ORTHO05D001705 8.7e-08 60.8 43 72.1
ECA248G0438 Erigeron canadensis HOM05D000038 ORTHO05D000612 1.1e-07 60.5 42 69.0
ECA232G3312 Erigeron canadensis HOM05D000001 ORTHO05D009086 1.5e-07 60.1 40 70.0
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 3.3e-07 58.9 40 70.0
ECA246G2446 Erigeron canadensis HOM05D000338 ORTHO05D000704 4.3e-07 58.5 40 70.0
Dinv20715 Davidia involucrata HOM05D005652 ORTHO05D185765 7.4e-07 57.8 39 76.9
ECA240G2299 Erigeron canadensis HOM05D000041 ORTHO05D000452 9.7e-07 57.4 63 57.1
Actinidia03505 Actinidia chinensis HOM05D005652 ORTHO05D054027 1.3e-06 57.0 78 48.7
ECA240G3064 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.7e-06 55.5 41 63.4
ECA248G0654 Erigeron canadensis HOM05D000967 ORTHO05D000796 4.8e-06 55.1 35 77.1
ECA246G2323 Erigeron canadensis HOM05D015607 ORTHO05D009086 6.3e-06 54.7 44 63.6


User provided reference genes

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