Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 1.5e-153 546.2 282 100.0
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 4.1e-103 378.6 276 72.1
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 1.8e-98 363.2 274 69.0
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 4.8e-88 328.6 271 63.1
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 1.8e-87 326.6 271 63.5
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 2.4e-87 326.2 272 63.2
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 4.1e-87 325.5 280 61.1
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 5.4e-87 325.1 268 64.2
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 7.0e-87 324.7 271 63.5
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 9.1e-87 324.3 264 64.8
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 1.0e-85 320.9 268 63.8
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 1.3e-85 320.5 271 62.4
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 3.8e-85 318.9 270 60.4
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 3.8e-85 318.9 271 60.9
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 2.5e-84 316.2 270 61.9
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 4.2e-84 315.5 270 60.4
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 4.2e-84 315.5 268 61.9
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 9.4e-84 314.3 266 63.2
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 9.4e-84 314.3 271 59.8
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 1.2e-83 313.9 270 61.5
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 2.1e-83 313.2 271 61.3
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 2.1e-83 313.2 268 63.1
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 2.1e-83 313.2 281 60.5
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 4.7e-83 312.0 271 60.1
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 4.7e-83 312.0 271 60.9
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 6.1e-83 311.6 271 62.0
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.0e-82 310.8 271 58.3
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 1.4e-82 310.5 269 62.8
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 2.3e-82 309.7 266 59.8
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 5.2e-82 308.5 280 58.2
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 1.5e-81 307.0 267 59.6
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 4.4e-81 305.4 271 59.8
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 9.8e-81 304.3 280 57.5
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 1.7e-80 303.5 269 58.7
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 1.7e-80 303.5 271 58.7
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 2.2e-80 303.1 270 58.5
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 2.2e-80 303.1 272 58.1
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 2.2e-80 303.1 266 59.0
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 4.9e-80 302.0 272 57.4
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 4.9e-80 302.0 272 63.2
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 6.3e-80 301.6 267 58.1
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 8.3e-80 301.2 266 60.2
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 1.4e-79 300.4 270 60.0
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 1.8e-79 300.1 272 57.7
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 1.8e-79 300.1 267 60.7
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 2.4e-79 299.7 279 57.3
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 2.4e-79 299.7 276 58.7
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 3.1e-79 299.3 272 64.0
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 4.1e-79 298.9 266 60.2
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 4.1e-79 298.9 269 57.6
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 5.4e-79 298.5 270 57.8
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 5.4e-79 298.5 280 57.1
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 5.4e-79 298.5 280 57.1
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 5.4e-79 298.5 272 58.5
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 5.4e-79 298.5 272 57.0
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 5.4e-79 298.5 272 57.0
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 7.0e-79 298.1 266 59.4
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 9.1e-79 297.7 271 63.1
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 2.0e-78 296.6 272 57.0
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 2.0e-78 296.6 270 58.5
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 3.5e-78 295.8 273 57.5
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 3.5e-78 295.8 271 63.1
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 4.5e-78 295.4 272 58.1
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 5.9e-78 295.0 271 59.0
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 5.9e-78 295.0 266 59.8
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 7.7e-78 294.7 270 59.3
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 1.0e-77 294.3 270 57.0
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 1.0e-77 294.3 270 58.1
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 1.0e-77 294.3 282 55.0
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 2.3e-77 293.1 270 58.1
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 8.6e-77 291.2 268 57.5
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 1.1e-76 290.8 280 56.4
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 1.9e-76 290.0 275 54.2
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 3.3e-76 289.3 279 54.5
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 3.3e-76 289.3 268 58.2
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 4.2e-76 288.9 272 56.6
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 7.2e-76 288.1 301 54.5
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 7.2e-76 288.1 266 56.8
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 1.2e-75 287.3 281 54.1
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 2.8e-75 286.2 268 55.2
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 6.1e-75 285.0 274 57.7
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 1.4e-74 283.9 272 55.1
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 2.3e-74 283.1 274 55.5
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 3.0e-74 282.7 274 55.5
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 3.0e-74 282.7 277 56.0
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 5.2e-74 282.0 281 54.1
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 6.8e-74 281.6 271 56.1
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 6.8e-74 281.6 301 52.5
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 4.1e-71 272.3 269 56.1
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 8.6e-69 264.6 271 55.4
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 3.3e-68 262.7 271 53.5
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 8.0e-67 258.1 267 48.7
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 4.0e-66 255.8 256 52.3
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 4.4e-65 252.3 248 56.5
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 1.5e-60 237.3 216 57.9
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 9.5e-60 234.6 274 48.2
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 1.4e-58 230.7 275 50.2
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 3.2e-55 219.5 215 54.9
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 4.6e-54 215.7 275 41.1
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 1.4e-50 204.1 262 44.3
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 1.9e-47 193.7 258 44.6
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 4.1e-47 192.6 119 75.6
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 5.2e-42 175.6 128 65.6
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 7.6e-41 171.8 188 48.4
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 1.1e-36 157.9 286 40.6
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 7.3e-36 155.2 269 41.3
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 8.1e-35 151.8 269 37.5
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 2.4e-34 150.2 123 61.8
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 3.1e-26 123.2 152 47.4
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.1e-23 114.8 153 54.9
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 3.3e-20 103.2 170 35.9
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 2.3e-13 80.5 143 39.9
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 1.9e-12 77.4 143 33.6
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.7e-08 64.3 37 81.1
FAN23G0356 Fragaria x ananassa HOM05D006878 ORTHO05D008579 3.2e-07 60.1 55 49.1
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 3.5e-06 56.6 34 73.5


User provided reference genes

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