Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 5.5e-116 421.0 215 100.0
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 2.2e-104 382.5 213 90.6
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 1.5e-102 376.3 198 94.9
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 4.1e-95 351.7 215 79.5
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 5.3e-95 351.3 199 83.9
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 2.6e-94 349.0 215 78.6
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 5.9e-94 347.8 199 83.4
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 2.9e-93 345.5 215 78.1
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 5.0e-93 344.7 215 77.7
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 8.5e-93 344.0 199 82.4
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 5.5e-92 341.3 199 82.9
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 7.2e-92 340.9 199 83.4
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 2.1e-91 339.3 203 79.3
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 2.7e-91 339.0 215 78.1
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 2.7e-91 339.0 199 82.9
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 4.7e-91 338.2 215 79.1
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 6.1e-91 337.8 203 80.3
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 7.9e-91 337.4 210 78.6
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 7.9e-91 337.4 210 78.6
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 2.3e-90 335.9 215 77.2
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 2.3e-90 335.9 215 77.2
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 8.8e-90 334.0 215 77.7
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 1.5e-89 333.2 215 74.9
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 1.5e-89 333.2 212 75.5
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 3.3e-89 332.0 213 76.5
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 9.7e-89 330.5 203 78.8
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 9.7e-89 330.5 208 77.4
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 9.7e-89 330.5 213 75.1
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 1.3e-88 330.1 203 79.3
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 1.7e-88 329.7 212 76.9
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 2.8e-88 328.9 213 76.5
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 6.3e-88 327.8 199 78.4
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 8.2e-88 327.4 216 73.6
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 8.2e-88 327.4 197 79.2
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 8.2e-88 327.4 199 77.9
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 1.1e-87 327.0 215 74.9
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.8e-87 326.2 199 79.4
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 3.1e-87 325.5 215 76.3
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 3.1e-87 325.5 199 77.9
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 5.3e-87 324.7 215 75.3
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 9.1e-87 323.9 215 75.8
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 9.1e-87 323.9 211 72.5
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 9.1e-87 323.9 201 76.1
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 1.2e-86 323.6 215 74.9
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 1.2e-86 323.6 198 77.3
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.2e-86 323.6 198 77.3
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 1.2e-86 323.6 202 78.7
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 2.0e-86 322.8 201 75.1
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 2.0e-86 322.8 198 79.3
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 2.6e-86 322.4 198 77.3
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 2.6e-86 322.4 198 78.8
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 3.5e-86 322.0 199 77.4
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 4.5e-86 321.6 192 82.3
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 5.9e-86 321.2 199 78.9
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 7.7e-86 320.9 215 73.0
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 7.7e-86 320.9 199 76.9
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 1.3e-85 320.1 200 78.0
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 2.2e-85 319.3 200 76.5
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 2.5e-84 315.8 200 74.0
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 2.5e-84 315.8 198 76.3
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 4.2e-84 315.1 200 75.5
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 4.2e-84 315.1 199 77.9
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 7.2e-84 314.3 190 79.5
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 9.4e-84 313.9 204 76.5
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 1.6e-83 313.2 213 72.8
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 3.6e-83 312.0 194 76.3
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 1.0e-82 310.5 201 76.1
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 1.0e-82 310.5 201 76.1
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 1.8e-82 309.7 214 71.0
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 3.0e-82 308.9 213 70.4
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 5.2e-82 308.1 201 75.6
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 6.7e-82 307.8 198 73.2
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 1.1e-81 307.0 201 75.1
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 1.1e-81 307.0 200 74.5
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 2.0e-81 306.2 201 75.1
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 5.7e-81 304.7 203 71.4
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 7.5e-81 304.3 201 71.6
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 1.3e-80 303.5 217 71.0
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 8.2e-80 300.8 215 71.2
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 3.1e-79 298.9 199 71.9
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 9.1e-79 297.4 198 73.2
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 1.2e-78 297.0 199 74.4
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 1.0e-77 293.9 199 73.4
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 5.0e-77 291.6 215 68.8
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 7.2e-76 287.7 172 80.2
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 1.2e-75 287.0 195 70.3
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.4e-74 283.5 184 76.1
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 8.8e-74 280.8 191 70.7
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 9.8e-73 277.3 194 67.5
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 1.8e-71 273.1 193 66.8
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.0e-61 240.7 147 81.0
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 5.0e-61 238.4 191 58.1
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 4.0e-58 228.8 129 87.6
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 1.7e-56 223.4 143 77.6
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 3.9e-53 212.2 238 52.1
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 4.0e-50 202.2 238 51.3
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 7.5e-49 198.0 145 69.7
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.3e-48 197.2 161 62.1
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 4.6e-46 188.7 193 48.7
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 2.5e-44 183.0 131 67.9
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 3.6e-43 179.1 149 55.7
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.4e-42 177.2 243 45.7
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 1.7e-40 170.2 201 44.3
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 6.0e-38 161.8 110 74.5
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 4.7e-35 152.1 97 74.2
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.1e-34 151.0 94 77.7
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.5e-33 147.1 114 64.9
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 9.9e-33 144.4 98 69.4
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.3e-32 144.1 137 54.0
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 3.2e-31 139.4 208 38.5
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 9.2e-31 137.9 93 75.3
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 1.2e-30 137.5 187 40.6
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 1.2e-30 137.5 122 55.7
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 1.9e-28 130.2 130 53.8
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 1.5e-20 104.0 71 64.8
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 1.5e-17 94.0 49 89.8
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 2.2e-16 90.1 71 64.8
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 2.2e-16 90.1 52 75.0
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 4.3e-12 75.9 64 56.2
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 5.3e-10 68.9 56 50.0
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 1.5e-09 67.4 52 53.8
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 4.5e-09 65.9 52 51.9
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 7.6e-09 65.1 68 52.9
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 2.4e-07 60.1 43 72.1
Ah.03g140070 Amaranthus hybridus HOM05D006387 ORTHO05D008533 3.2e-07 59.7 51 62.7


User provided reference genes

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