Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G0775 Erigeron canadensis HOM05D007064 ORTHO05D008772 8.5e-246 853.2 422 100.0
Lsat_1_v5_gn_2_95061 Lactuca sativa HOM05D007064 ORTHO05D008772 1.4e-187 659.8 417 79.9
HanXRQChr14g0451581 Helianthus annuus HOM05D007064 ORTHO05D008772 1.2e-180 636.7 427 76.8
CSS0020222 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 2.7e-167 592.4 394 75.4
Rhsim03G0222700 Rhododendron simsii HOM05D007064 ORTHO05D008772 1.7e-166 589.7 392 74.5
CSS0020425 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 3.9e-166 588.6 394 74.9
CiPaw.05G216200 Carya illinoinensis HOM05D007064 ORTHO05D008772 5.8e-162 574.7 377 74.8
GSVIVG01024376001 Vitis vinifera HOM05D007064 ORTHO05D008772 1.7e-161 573.2 383 74.2
Actinidia34318 Actinidia chinensis HOM05D007064 ORTHO05D008772 2.2e-161 572.8 399 72.2
TAR629G0708 Trochodendron aralioides HOM05D007064 ORTHO05D008772 7.1e-160 567.8 377 73.5
QL09p023233 Quercus lobata HOM05D007064 ORTHO05D008772 3.0e-158 562.4 378 73.0
Haze_00398 Corylus avellana HOM05D007064 ORTHO05D008772 2.1e-156 556.2 377 73.2
Migut.F00087 Erythranthe guttata HOM05D007064 ORTHO05D008772 4.8e-156 555.1 378 73.3
Nn1g00178 Nelumbo nucifera HOM05D007064 ORTHO05D008772 6.9e-155 551.2 377 70.8
Nitab4.5_0000021g0660 Nicotiana tabacum HOM05D007064 ORTHO05D008772 4.5e-154 548.5 396 69.7
PSO063G1297 Papaver somniferum HOM05D007064 ORTHO05D008772 5.8e-154 548.1 377 70.3
Gohir.A11G303500 Gossypium hirsutum HOM05D007064 ORTHO05D008772 9.9e-154 547.4 401 69.6
COL.COLO4_15235 Corchorus olitorius HOM05D007064 ORTHO05D008772 1.3e-153 547.0 395 71.6
Thecc.05G215700 Theobroma cacao HOM05D007064 ORTHO05D008772 4.9e-153 545.0 377 72.4
Ciclev10020357m.g Citrus clementina HOM05D007064 ORTHO05D008772 6.4e-153 544.7 377 70.6
PSO782G0881 Papaver somniferum HOM05D007064 ORTHO05D008772 1.4e-152 543.5 377 69.8
Nitab4.5_0004530g0030 Nicotiana tabacum HOM05D007064 ORTHO05D008772 2.4e-152 542.7 396 68.9
Cfa016048 Carpinus fangiana HOM05D007064 ORTHO05D008772 5.4e-152 541.6 377 71.4
TWI60G0820 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 7.1e-152 541.2 375 70.9
Gorai.007G348800 Gossypium raimondii HOM05D007064 ORTHO05D008772 2.7e-151 539.3 393 69.2
Cc02_g00210 Coffea canephora HOM05D007064 ORTHO05D008772 1.3e-150 537.0 395 66.6
CsaV3_3G050060 Cucumis sativus L. HOM05D007064 ORTHO05D008772 1.3e-150 537.0 377 70.0
Sc19g0000100 Simmondsia chinensis HOM05D007064 ORTHO05D008772 2.3e-150 536.2 377 69.0
Atru.chr12.1880 Acer truncatum HOM05D007064 ORTHO05D008772 3.0e-150 535.8 396 67.2
Duzib106G1646 Durio zibethinus HOM05D007064 ORTHO05D008772 6.7e-150 534.6 388 69.8
Solyc03g097130.3 Solanum lycopersicum HOM05D007064 ORTHO05D008772 6.7e-150 534.6 376 69.9
PGSC0003DMG400003147 Solanum tuberosum HOM05D007064 ORTHO05D008772 1.5e-149 533.5 376 69.9
FvH4_4g01950 Fragaria vesca HOM05D007064 ORTHO05D008772 1.6e-148 530.0 377 69.5
RcHm_v2.0_Chr4g0388921 Rosa chinensis HOM05D007064 ORTHO05D008772 2.1e-148 529.6 377 68.2
MD13G1202900 Malus domestica HOM05D007064 ORTHO05D008772 4.8e-148 528.5 374 70.1
FAN12G0288 Fragaria x ananassa HOM05D007064 ORTHO05D008772 8.1e-148 527.7 377 69.0
CANSAT78G1989 Cannabis sativa HOM05D007064 ORTHO05D008772 3.1e-147 525.8 394 66.2
Ah.04g156400 Amaranthus hybridus HOM05D007064 ORTHO05D008772 5.3e-147 525.0 375 66.7
Hund09801 Selenicereus undatus HOM05D007064 ORTHO05D000105 9.0e-147 524.2 388 67.8
arahy.Tifrunner.gnm1.ann1.P291P9 Arachis hypogaea HOM05D007064 ORTHO05D008772 1.2e-146 523.9 388 66.2
Aqoxy3G02225 Aquilegia oxysepala HOM05D007064 ORTHO05D008772 1.5e-146 523.5 413 63.7
CAN.G1131.22 Capsicum annuum HOM05D007064 ORTHO05D008772 2.6e-146 522.7 376 69.1
arahy.Tifrunner.gnm1.ann1.EDBW82 Arachis hypogaea HOM05D007064 ORTHO05D008772 9.9e-146 520.8 388 66.0
SGA_v2.0_scaffold44G16901 Striga asiatica HOM05D007064 ORTHO05D008772 9.9e-146 520.8 378 67.7
Sabra19G0062000 Salix brachista HOM05D007064 ORTHO05D008772 1.9e-144 516.5 376 67.3
ATR0829G191 Amborella trichopoda HOM05D007064 ORTHO05D008772 5.5e-144 515.0 384 65.1
AUR62028195 Chenopodium quinoa HOM05D007064 ORTHO05D008772 7.1e-144 514.6 375 67.2
Lalb_Chr09g0320151 Lupinus albus HOM05D007064 ORTHO05D008772 1.5e-141 506.9 377 66.3
LjContig00222g0020502 Lotus japonicus HOM05D007064 ORTHO05D008772 3.3e-141 505.8 424 60.6
TWI60G1094 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 7.4e-141 504.6 351 71.5
EL10Ac3g05060 Beta vulgaris HOM05D007064 ORTHO05D008772 1.8e-139 500.0 391 62.7
SalBow4G1574 Salvia bowleyana HOM05D007064 ORTHO05D008772 4.0e-139 498.8 378 66.7
AL6G27830 Arabidopsis lyrata HOM05D007064 ORTHO05D008772 9.0e-139 497.7 376 66.0
Gohir.D11G318800 Gossypium hirsutum HOM05D007064 ORTHO05D008772 2.6e-138 496.1 331 72.5
VMungo1215G2591 Vigna mungo HOM05D007064 ORTHO05D008772 2.6e-138 496.1 427 59.7
ClCG09G013090 Citrullus lanatus HOM05D007064 ORTHO05D008772 3.4e-138 495.7 361 67.3
Glyma.11G009700 Glycine max HOM05D007064 ORTHO05D008772 1.0e-137 494.2 397 62.7
AT5G16810 Arabidopsis thaliana HOM05D007064 ORTHO05D008772 1.3e-137 493.8 376 64.9
SalBow4G1678 Salvia bowleyana HOM05D007064 ORTHO05D008772 1.3e-137 493.8 384 65.9
Thhalv10013656m.g Eutrema salsugineum HOM05D007064 ORTHO05D008772 3.8e-137 492.3 376 66.0
Phvul.002G040600 Phaseolus vulgaris HOM05D007064 ORTHO05D008772 1.4e-136 490.3 397 61.5
THA.LOC104820893 Tarenaya hassleriana HOM05D007064 ORTHO05D008772 2.5e-136 489.6 393 62.6
Os02g0694800 Oryza sativa ssp. japonica HOM05D007064 ORTHO05D008772 4.2e-136 488.8 382 64.1
Sp6g27320 Schrenkiella parvula HOM05D007064 ORTHO05D008772 5.5e-136 488.4 376 65.2
Zm00001eb187800 Zea mays HOM05D007064 ORTHO05D008772 7.1e-136 488.0 394 61.7
Lj1A1033T73 Lonicera japonica HOM05D007064 ORTHO05D008772 9.3e-136 487.6 333 73.0
AUR62002078 Chenopodium quinoa HOM05D007064 ORTHO05D008772 2.1e-135 486.5 382 63.4
BolC2t06775H Brassica oleracea HOM05D007064 ORTHO05D008772 2.7e-135 486.1 374 65.2
BcaC03g18516 Brassica carinata HOM05D007064 ORTHO05D008772 3.5e-135 485.7 374 65.2
C02p08600 Brassica napus HOM05D007064 ORTHO05D008772 3.5e-135 485.7 374 65.2
Medtr5g006230 Medicago truncatula HOM05D007064 ORTHO05D008772 3.0e-134 482.6 401 61.1
HPP92_025673 Vanilla planifolia HOM05D007064 ORTHO05D008772 3.7e-132 475.7 380 61.6
TPR.G37970 Trifolium pratense HOM05D007064 ORTHO05D008772 4.8e-132 475.3 375 62.9
Dinv17250 Davidia involucrata HOM05D007064 ORTHO05D008772 1.8e-131 473.4 324 75.0
Ca_24438_v3 Cicer arietinum L. HOM05D007064 ORTHO05D008772 2.6e-130 469.5 377 61.5
BcaNung04953 Brassica carinata HOM05D007064 ORTHO05D008772 5.9e-130 468.4 374 63.9
CDE11G0292 Ceratophyllum demersum HOM05D007064 ORTHO05D008772 3.8e-129 465.7 378 62.2
BraA02t05344Z Brassica rapa HOM05D007064 ORTHO05D008772 1.4e-128 463.8 380 63.2
A02p03790 Brassica napus HOM05D007064 ORTHO05D008772 2.1e-127 459.9 382 61.8
vmacro06523 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 1.9e-125 453.4 425 57.9
Aa31LG11G12770 Aethionema arabicum HOM05D007064 ORTHO05D008772 2.2e-124 449.9 404 57.9
Hma1.2p1_0649F.1_g195260 Hydrangea macrophylla HOM05D007064 ORTHO05D008772 4.8e-124 448.7 282 78.4
SEGI_11081 Sequoiadendron giganteum HOM05D007064 ORTHO05D008772 1.1e-123 447.6 393 58.3
MELO3C003312.2 Cucumis melo HOM05D007064 ORTHO05D008772 1.5e-122 443.7 348 64.9
Sed0013285 Sechium edule HOM05D007064 ORTHO05D008772 1.5e-122 443.7 291 72.2
Peaxi162Scf00516g00675 Petunia axillaris HOM05D007064 ORTHO05D008772 7.7e-122 441.4 400 59.8
Prupe.1G025200 Prunus persica HOM05D007064 ORTHO05D008772 8.5e-121 438.0 323 67.5
Sopen03g027870 Solanum pennellii HOM05D007064 ORTHO05D008772 1.4e-115 420.6 282 71.3
Potri.019G050500 Populus trichocarpa HOM05D007064 ORTHO05D008772 1.0e-113 414.5 305 66.9
Eucgr.K00080 Eucalyptus grandis HOM05D007064 ORTHO05D008772 6.5e-113 411.8 270 74.1
Manes.09G127400 Manihot esculenta HOM05D007064 ORTHO05D008772 5.9e-106 388.7 321 62.6
Carub.0006s1503 Capsella rubella HOM05D007064 ORTHO05D008772 2.7e-103 379.8 280 67.1
Psat2g189080 Pisum sativum HOM05D007064 ORTHO05D008772 5.2e-102 375.6 321 60.1
Pp3c23_10770 Physcomitrium patens HOM05D007064 ORTHO05D008772 1.2e-101 374.4 410 48.5
Mapoly0096s0061 Marchantia polymorpha HOM05D007064 ORTHO05D008772 1.3e-100 370.9 402 48.5
Oeu038089.3 Olea europaea HOM05D007064 ORTHO05D008772 4.8e-100 369.0 393 54.5
Glyma.01G233100 Glycine max HOM05D007064 ORTHO05D008772 1.7e-92 344.0 325 56.0
CARHR196350 Cardamine hirsuta HOM05D007064 ORTHO05D008772 4.5e-90 335.9 278 60.8
AagrBONN_evm.TU.Sc2ySwM_344.2887 Anthoceros agrestis HOM05D007064 ORTHO05D008772 2.3e-70 270.4 300 46.3
SMO343G0012 Selaginella moellendorffii HOM05D007064 ORTHO05D008772 2.6e-61 240.4 409 37.9
CBR_g8898 Chara braunii HOM05D007064 ORTHO05D008772 2.9e-44 183.7 126 66.7
Cpa.g.sc43.97 Carica papaya HOM05D007064 ORTHO05D008772 2.5e-40 170.6 133 62.4
Psat0s4094g0040 Pisum sativum HOM05D007064 ORTHO05D008772 1.4e-38 164.9 111 67.6
CBR_g8900 Chara braunii HOM05D007064 ORTHO05D000002 4.0e-38 163.3 232 41.8
Cpa.g.sc43.98 Carica papaya HOM05D007064 ORTHO05D008772 1.4e-30 138.3 72 90.3
Oeu043948.1 Olea europaea HOM05D007064 ORTHO05D008772 2.7e-26 124.0 78 79.5
HanXRQChr01g0005821 Helianthus annuus HOM05D007064 ORTHO05D008772 6.9e-22 109.4 70 72.9
Lj1A1033G66 Lonicera japonica HOM05D007064 ORTHO05D008772 3.4e-21 107.1 55 89.1
TPR.G40530 Trifolium pratense HOM05D007064 ORTHO05D008772 1.3e-17 95.1 55 74.5
CBR_g6359 Chara braunii HOM05D007064 ORTHO05D008772 3.3e-08 63.9 96 38.5
Pp3c10_6850 Physcomitrium patens HOM05D002406 ORTHO05D006947 3.3e-08 63.9 351 24.2
Mapoly0001s0031 Marchantia polymorpha HOM05D002406 ORTHO05D006947 3.7e-07 60.5 386 24.1
vmacro06524 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 4.1e-06 57.0 33 78.8
ATR0681G159 Amborella trichopoda HOM05D002406 ORTHO05D007964 6.9e-06 56.2 322 20.8
TAR629G2259 Trochodendron aralioides HOM05D002406 ORTHO05D007964 9.1e-06 55.8 314 22.6


User provided reference genes

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