Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G0572 Erigeron canadensis HOM05D004402 ORTHO05D005314 3.8e-293 1010.7 504 100.0
HanXRQChr14g0454821 Helianthus annuus HOM05D004402 ORTHO05D005314 5.2e-250 867.5 512 84.4
Dinv35795 Davidia involucrata HOM05D004402 ORTHO05D005314 6.4e-216 754.2 507 73.4
CSS0044786 Camellia sinensis var. sinensis HOM05D004402 ORTHO05D005314 2.1e-214 749.2 507 73.8
GSVIVG01033653001 Vitis vinifera HOM05D004402 ORTHO05D005314 2.3e-213 745.7 508 71.3
Ciclev10011527m.g Citrus clementina HOM05D004402 ORTHO05D005314 1.3e-208 729.9 504 71.6
Duzib093G2129 Durio zibethinus HOM05D004402 ORTHO05D005314 1.9e-207 726.1 507 71.2
ECA248G3038 Erigeron canadensis HOM05D004402 ORTHO05D005314 9.2e-207 723.8 499 71.5
vmacro01673 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 2.7e-206 722.2 541 66.5
Gorai.009G414300 Gossypium raimondii HOM05D004402 ORTHO05D005314 3.5e-206 721.8 507 71.2
Potri.006G123000 Populus trichocarpa HOM05D004402 ORTHO05D005314 3.5e-206 721.8 503 72.2
Sabra06G0097300 Salix brachista HOM05D004402 ORTHO05D005314 1.0e-205 720.3 503 72.0
Cc06_g04350 Coffea canephora HOM05D004402 ORTHO05D005314 1.3e-205 719.9 507 69.8
Oeu041487.1 Olea europaea HOM05D004402 ORTHO05D005314 1.3e-205 719.9 504 70.0
Gohir.D04G110200 Gossypium hirsutum HOM05D004402 ORTHO05D005314 2.3e-205 719.2 507 71.0
Atru.chr8.1786 Acer truncatum HOM05D004402 ORTHO05D005314 5.1e-205 718.0 507 71.0
CiPaw.10G128900 Carya illinoinensis HOM05D004402 ORTHO05D005314 5.1e-205 718.0 502 70.9
QL07p043056 Quercus lobata HOM05D004402 ORTHO05D005314 5.1e-205 718.0 507 70.4
Sopen10g033410 Solanum pennellii HOM05D004402 ORTHO05D005314 6.6e-205 717.6 506 70.8
Lsat_1_v5_gn_1_51600 Lactuca sativa HOM05D004402 ORTHO05D005314 1.5e-204 716.5 499 72.3
Thecc.05G068900 Theobroma cacao HOM05D004402 ORTHO05D005314 5.6e-204 714.5 502 70.9
Cfa017631 Carpinus fangiana HOM05D004402 ORTHO05D005314 2.1e-203 712.6 507 70.6
Nitab4.5_0000578g0080 Nicotiana tabacum HOM05D004402 ORTHO05D005314 2.1e-203 712.6 508 69.5
Lj2C120T4 Lonicera japonica HOM05D004402 ORTHO05D005314 3.6e-203 711.8 474 74.9
Prupe.7G128300 Prunus persica HOM05D004402 ORTHO05D005314 3.6e-203 711.8 507 69.6
TAR636G0918 Trochodendron aralioides HOM05D004402 ORTHO05D005314 4.0e-202 708.4 490 71.4
COL.COLO4_09330 Corchorus olitorius HOM05D004402 ORTHO05D005314 8.9e-202 707.2 506 70.4
DCAR_015004 Daucus carota HOM05D004402 ORTHO05D005314 8.9e-202 707.2 519 69.2
Phvul.001G179700 Phaseolus vulgaris HOM05D004402 ORTHO05D005314 2.0e-201 706.1 505 68.3
TAR633G1938 Trochodendron aralioides HOM05D004402 ORTHO05D005314 2.6e-201 705.7 506 69.0
CANSAT80G1177 Cannabis sativa HOM05D004402 ORTHO05D005314 4.4e-201 704.9 506 69.6
RcHm_v2.0_Chr3g0470441 Rosa chinensis HOM05D004402 ORTHO05D005314 5.8e-201 704.5 507 70.4
Glyma.19G184800 Glycine max HOM05D004402 ORTHO05D005314 1.7e-200 703.0 503 69.4
Glyma.03G184200 Glycine max HOM05D004402 ORTHO05D005314 2.9e-200 702.2 503 69.2
Aa31LG1G21720 Aethionema arabicum HOM05D004402 ORTHO05D005314 8.4e-200 700.7 504 70.8
FvH4_6g16530 Fragaria vesca HOM05D004402 ORTHO05D005314 8.4e-200 700.7 507 70.2
Nn6g35264 Nelumbo nucifera HOM05D004402 ORTHO05D005314 8.4e-200 700.7 507 68.6
Lj1g0000599 Lotus japonicus HOM05D004402 ORTHO05D005314 1.1e-199 700.3 508 68.9
DCAR_017670 Daucus carota HOM05D004402 ORTHO05D005314 1.4e-199 699.9 508 68.7
Sopen09g003130 Solanum pennellii HOM05D004402 ORTHO05D005314 2.4e-199 699.1 507 68.8
Ca_08910_v3 Cicer arietinum L. HOM05D004402 ORTHO05D005314 4.2e-199 698.4 503 69.0
Solyc09g008310.3 Solanum lycopersicum HOM05D004402 ORTHO05D005314 4.2e-199 698.4 507 68.8
MSTRG.10328 Avicennia marina HOM05D004402 ORTHO05D005314 5.4e-199 698.0 499 69.1
Lalb_Chr25g0288951 Lupinus albus HOM05D004402 ORTHO05D005314 5.4e-199 698.0 506 67.8
A03p01170 Brassica napus HOM05D004402 ORTHO05D005314 2.1e-198 696.0 501 69.7
Lalb_Chr20g0112571 Lupinus albus HOM05D004402 ORTHO05D005314 1.0e-197 693.7 506 68.2
BcaB01g05839 Brassica carinata HOM05D004402 ORTHO05D005314 1.3e-197 693.3 501 69.5
PGR004G2373 Punica granatum HOM05D004402 ORTHO05D005314 2.3e-197 692.6 506 67.2
C03p01510 Brassica napus HOM05D004402 ORTHO05D005314 3.0e-197 692.2 501 69.5
Medtr7g102180 Medicago truncatula HOM05D004402 ORTHO05D005314 3.0e-197 692.2 506 67.8
BolC3t12705H Brassica oleracea HOM05D004402 ORTHO05D005314 3.9e-197 691.8 501 69.5
BraA10t45293Z Brassica rapa HOM05D004402 ORTHO05D005314 6.6e-197 691.0 502 68.9
ClCG10G020050 Citrullus lanatus HOM05D004402 ORTHO05D005314 8.7e-197 690.6 501 67.3
Sc20g0005590 Simmondsia chinensis HOM05D004402 ORTHO05D005314 8.7e-197 690.6 506 66.8
Migut.L01711 Erythranthe guttata HOM05D004402 ORTHO05D005314 1.1e-196 690.3 497 68.6
A10p32580 Brassica napus HOM05D004402 ORTHO05D005314 1.5e-196 689.9 505 68.7
C09p73380 Brassica napus HOM05D004402 ORTHO05D005314 1.9e-196 689.5 505 68.5
SalBow3G3127 Salvia bowleyana HOM05D004402 ORTHO05D005314 1.9e-196 689.5 505 67.3
SalBow2G1223 Salvia bowleyana HOM05D004402 ORTHO05D005314 2.5e-196 689.1 502 67.3
THA.LOC104823232 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 2.5e-196 689.1 506 68.6
BcaC06g32061 Brassica carinata HOM05D004402 ORTHO05D005314 3.3e-196 688.7 505 68.5
BolC9t60074H Brassica oleracea HOM05D004402 ORTHO05D005314 3.3e-196 688.7 505 68.5
CsaV3_3G036050 Cucumis sativus L. HOM05D004402 ORTHO05D005314 3.3e-196 688.7 501 66.9
BcaB01g05821 Brassica carinata HOM05D004402 ORTHO05D005314 4.3e-196 688.3 502 68.5
Solyc10g083960.2 Solanum lycopersicum HOM05D004402 ORTHO05D005314 9.6e-196 687.2 506 68.6
Peaxi162Scf00311g01314 Petunia axillaris HOM05D004402 ORTHO05D005314 1.3e-195 686.8 506 67.6
CAN.G488.15 Capsicum annuum HOM05D004402 ORTHO05D005314 2.1e-195 686.0 506 67.8
AUR62026916 Chenopodium quinoa HOM05D004402 ORTHO05D005314 2.1e-195 686.0 505 67.5
BcaC06g32058 Brassica carinata HOM05D004402 ORTHO05D005314 2.8e-195 685.6 504 68.3
BraA02t04760Z Brassica rapa HOM05D004402 ORTHO05D005314 2.8e-195 685.6 505 67.9
Carub.0006s0224 Capsella rubella HOM05D004402 ORTHO05D005314 3.6e-195 685.3 501 68.5
arahy.Tifrunner.gnm1.ann1.DYK8MJ Arachis hypogaea HOM05D004402 ORTHO05D005314 3.1e-194 682.2 545 64.4
arahy.Tifrunner.gnm1.ann1.ZWC5L9 Arachis hypogaea HOM05D004402 ORTHO05D005314 3.1e-194 682.2 545 64.4
BraA03t09499Z Brassica rapa HOM05D004402 ORTHO05D005314 3.1e-194 682.2 487 70.6
AT5G03430 Arabidopsis thaliana HOM05D004402 ORTHO05D005314 4.0e-194 681.8 501 68.5
THA.LOC104826918 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 4.0e-194 681.8 497 68.8
vmacro07301 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 5.3e-194 681.4 594 59.8
BolC2t06097H Brassica oleracea HOM05D004402 ORTHO05D005314 9.0e-194 680.6 503 67.6
PSO801G0054 Papaver somniferum HOM05D004402 ORTHO05D005314 9.0e-194 680.6 503 66.2
AL6G12780 Arabidopsis lyrata HOM05D004402 ORTHO05D005314 1.5e-193 679.9 504 68.1
TWI74G0242 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 1.5e-193 679.9 506 68.0
TWI77G0706 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 1.5e-193 679.9 505 67.9
CARHR209910 Cardamine hirsuta HOM05D004402 ORTHO05D005314 2.0e-193 679.5 502 67.7
PSO339G5499 Papaver somniferum HOM05D004402 ORTHO05D005314 9.9e-193 677.2 504 66.1
Manes.12G084800 Manihot esculenta HOM05D004402 ORTHO05D005314 1.3e-192 676.8 504 68.1
C02p01070 Brassica napus HOM05D004402 ORTHO05D005314 1.7e-192 676.4 503 67.2
Thhalv10013303m.g Eutrema salsugineum HOM05D004402 ORTHO05D005314 3.8e-192 675.2 510 66.9
Sp6g39310 Schrenkiella parvula HOM05D004402 ORTHO05D005314 4.9e-192 674.9 502 67.9
Dinv37323 Davidia involucrata HOM05D004402 ORTHO05D005314 1.1e-191 673.7 452 74.1
MBI17_g34762_MAGBIO Magnolia biondii HOM05D004402 ORTHO05D005314 4.6e-190 668.3 516 64.0
Eucgr.K02925 Eucalyptus grandis HOM05D004402 ORTHO05D005314 1.0e-189 667.2 502 67.1
COL.COLO4_26944 Corchorus olitorius HOM05D004402 ORTHO05D005314 1.3e-189 666.8 474 69.8
Sed0020729 Sechium edule HOM05D004402 ORTHO05D005314 1.3e-189 666.8 501 64.9
MD12G1109700 Malus domestica HOM05D004402 ORTHO05D005314 7.4e-188 661.0 477 69.2
ATR0910G004 Amborella trichopoda HOM05D004402 ORTHO05D005314 1.6e-187 659.8 497 65.0
MD04G1091700 Malus domestica HOM05D004402 ORTHO05D005314 5.3e-186 654.8 477 68.8
AUR62042064 Chenopodium quinoa HOM05D004402 ORTHO05D005314 7.6e-185 651.0 505 65.7
Rhsim03G0090600 Rhododendron simsii HOM05D004402 ORTHO05D005314 9.9e-185 650.6 560 60.5
Nn2g13812 Nelumbo nucifera HOM05D004402 ORTHO05D005314 1.9e-183 646.4 508 64.8
FAN14G0478 Fragaria x ananassa HOM05D004402 ORTHO05D005314 4.2e-183 645.2 507 66.5
Zm00001eb333440 Zea mays HOM05D004402 ORTHO05D005314 7.1e-183 644.4 509 63.1
FAN09G4748 Fragaria x ananassa HOM05D004402 ORTHO05D005314 9.3e-183 644.0 507 66.3
EL10Ac7g16646 Beta vulgaris HOM05D004402 ORTHO05D005314 1.3e-181 640.2 580 58.1
BcaB05g21840 Brassica carinata HOM05D004402 ORTHO05D005314 3.3e-180 635.6 500 63.8
Ah.08g211550 Amaranthus hybridus HOM05D004402 ORTHO05D005314 1.3e-179 633.6 506 63.0
MELO3C009365.2 Cucumis melo HOM05D004402 ORTHO05D005314 2.1e-179 632.9 501 63.3
Nitab4.5_0000063g0160 Nicotiana tabacum HOM05D004402 ORTHO05D005314 2.1e-179 632.9 498 65.3
Nitab4.5_0000814g0100 Nicotiana tabacum HOM05D004402 ORTHO05D005314 3.7e-179 632.1 498 64.7
HPP92_025807 Vanilla planifolia HOM05D004402 ORTHO05D005314 3.7e-179 632.1 504 63.7
CDE10G0806 Ceratophyllum demersum HOM05D004402 ORTHO05D005314 2.4e-178 629.4 511 62.0
Oeu005028.1 Olea europaea HOM05D004402 ORTHO05D005314 5.3e-178 628.2 516 62.4
VMungo1383G0058 Vigna mungo HOM05D004402 ORTHO05D005314 9.0e-178 627.5 457 67.6
Actinidia28911 Actinidia chinensis HOM05D004402 ORTHO05D005314 4.5e-177 625.2 465 68.8
Peaxi162Scf00722g00015 Petunia axillaris HOM05D004402 ORTHO05D005314 5.8e-177 624.8 507 63.3
Psat3g041880 Pisum sativum HOM05D004402 ORTHO05D005314 1.7e-176 623.2 453 69.3
Nitab4.5_0010955g0010 Nicotiana tabacum HOM05D004402 ORTHO05D005314 8.4e-176 620.9 520 61.9
SGA_v2.0_scaffold75G24834 Striga asiatica HOM05D004402 ORTHO05D005314 1.4e-175 620.2 504 64.7
FAN05G1679 Fragaria x ananassa HOM05D004402 ORTHO05D005314 6.7e-173 611.3 507 63.9
FAN05G2520 Fragaria x ananassa HOM05D004402 ORTHO05D005314 1.5e-172 610.1 507 63.7
unitig_60.g25815 Utricularia gibba HOM05D004402 ORTHO05D005314 1.1e-170 604.0 499 62.1
BcaC03g13007 Brassica carinata HOM05D004402 ORTHO05D005314 2.6e-169 599.4 459 64.9
FAN02G2572 Fragaria x ananassa HOM05D004402 ORTHO05D005314 2.6e-169 599.4 533 61.2
Migut.J00646 Erythranthe guttata HOM05D004402 ORTHO05D005314 8.2e-155 551.2 394 67.0
CAN.G900.21 Capsicum annuum HOM05D004402 ORTHO05D005314 1.4e-154 550.4 397 68.0
Hund20335 Selenicereus undatus HOM05D004402 ORTHO05D005314 9.4e-143 511.1 657 46.6
AagrBONN_evm.TU.Sc2ySwM_362.2690 Anthoceros agrestis HOM05D004402 ORTHO05D005314 1.2e-142 510.8 528 51.7
Haze_20522 Corylus avellana HOM05D004402 ORTHO05D005314 2.3e-141 506.5 480 57.3
Mapoly0054s0056 Marchantia polymorpha HOM05D004402 ORTHO05D005314 9.7e-140 501.1 537 50.1
SMO146G0130 Selaginella moellendorffii HOM05D004402 ORTHO05D005314 1.5e-135 487.3 418 61.7
SHI12325 Sapria himalayana HOM05D004402 ORTHO05D005314 4.7e-134 482.3 454 57.7
SGA_v2.0_scaffold224G42938 Striga asiatica HOM05D004402 ORTHO05D005314 2.8e-118 429.9 442 53.8
TPR.G32815 Trifolium pratense HOM05D004402 ORTHO05D005314 4.9e-115 419.1 334 62.6
PGSC0003DMG401028184 Solanum tuberosum HOM05D004402 ORTHO05D005314 9.5e-111 404.8 273 71.1
Gohir.A04G071600 Gossypium hirsutum HOM05D004402 ORTHO05D005314 2.0e-108 397.1 275 74.2
Aqoxy3G01670 Aquilegia oxysepala HOM05D004402 ORTHO05D005314 3.5e-105 386.3 279 69.2
HanXRQChr07g0194721 Helianthus annuus HOM05D004402 ORTHO05D005314 3.4e-92 343.2 505 45.7
Zm00001eb128460 Zea mays HOM05D004402 ORTHO05D005314 2.9e-83 313.5 241 63.9
SEGI_14784 Sequoiadendron giganteum HOM05D004402 ORTHO05D005314 6.4e-83 312.4 243 64.6
Zm00001eb127890 Zea mays HOM05D004402 ORTHO05D005314 5.1e-80 302.8 255 60.0
Gohir.A04G071700 Gossypium hirsutum HOM05D004402 ORTHO05D005314 3.8e-75 286.6 207 66.7
Cre13.g592500 Chlamydomonas reinhardtii HOM05D004402 ORTHO05D005314 2.9e-67 260.4 560 33.2
Hma1.2p1_0828F.1_g225130 Hydrangea macrophylla HOM05D004402 ORTHO05D005314 3.2e-66 256.9 232 58.6
PRCOL_00001257 Prasinoderma coloniale HOM05D004402 ORTHO05D005314 6.2e-62 242.7 498 33.5
TAR636G0069 Trochodendron aralioides HOM05D004402 ORTHO05D005314 7.7e-44 182.6 183 52.5
Os01g0259600 Oryza sativa ssp. japonica HOM05D004402 ORTHO05D005314 6.5e-43 179.5 135 63.7
VMungo1383G2351 Vigna mungo HOM05D004402 ORTHO05D005314 2.6e-36 157.5 110 73.6
PRCOL_00006213 Prasinoderma coloniale HOM05D004402 ORTHO05D005314 1.4e-34 151.8 234 38.5
TAR636G0130 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.8e-32 144.8 127 58.3
SalBow3G0082 Salvia bowleyana HOM05D004402 ORTHO05D005314 2.0e-31 141.4 248 39.9
SalBow3G2408 Salvia bowleyana HOM05D004402 ORTHO05D005314 5.7e-31 139.8 248 39.5
TPR.G11110 Trifolium pratense HOM05D004402 ORTHO05D005314 5.3e-29 133.3 68 88.2
HanXRQChr13g0396631 Helianthus annuus HOM05D004402 ORTHO05D005314 5.9e-28 129.8 72 86.1
PGSC0003DMG400003892 Solanum tuberosum HOM05D004402 ORTHO05D005314 7.7e-28 129.4 107 58.9
SalBow3G1023 Salvia bowleyana HOM05D004402 ORTHO05D005314 1.2e-23 115.5 77 72.7
Cfa022272 Carpinus fangiana HOM05D004402 ORTHO05D005314 4.2e-18 97.1 167 31.1
CBR_g4033 Chara braunii HOM05D004402 ORTHO05D005314 4.4e-15 87.0 113 46.0
Cre01.g026650 Chlamydomonas reinhardtii HOM05D004402 ORTHO05D007141 1.8e-13 81.6 248 28.2
Lsat_1_v5_gn_6_17200 Lactuca sativa HOM05D004402 ORTHO05D005314 7.7e-12 76.3 119 39.5
CAN.G900.20 Capsicum annuum HOM05D004402 ORTHO05D005314 1.7e-11 75.1 82 50.0
ECA233G2956 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.5e-10 69.3 106 45.3
TAR636G1582 Trochodendron aralioides HOM05D004402 ORTHO05D005314 5.2e-08 63.5 36 80.6
Cfa025539 Carpinus fangiana HOM05D003439 ORTHO05D004062 2.0e-07 61.6 122 29.5
CBR_g4032 Chara braunii HOM05D004402 ORTHO05D043925 3.4e-07 60.8 36 75.0


User provided reference genes

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