Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G0419 Erigeron canadensis HOM05D005355 ORTHO05D006591 4.3e-211 738.0 461 100.0
Lsat_1_v5_gn_5_101461 Lactuca sativa HOM05D005355 ORTHO05D006591 1.1e-108 397.9 413 58.6
HanXRQChr04g0109451 Helianthus annuus HOM05D005355 ORTHO05D006591 6.9e-100 368.6 392 59.2
GSVIVG01008886001 Vitis vinifera HOM05D005355 ORTHO05D006591 9.3e-89 331.6 431 48.3
CSS0023513 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 1.4e-84 317.8 441 47.8
Potri.002G085000 Populus trichocarpa HOM05D005355 ORTHO05D006591 6.9e-84 315.5 437 48.1
Manes.18G076200 Manihot esculenta HOM05D005355 ORTHO05D006591 1.2e-83 314.7 423 47.8
MD15G1351600 Malus domestica HOM05D005355 ORTHO05D006591 5.9e-83 312.4 483 43.7
CiPaw.05G223300 Carya illinoinensis HOM05D005355 ORTHO05D006591 1.3e-82 311.2 435 47.8
Eucgr.F04357 Eucalyptus grandis HOM05D005355 ORTHO05D006591 2.9e-82 310.1 430 47.2
Ciclev10000938m.g Citrus clementina HOM05D005355 ORTHO05D006591 5.0e-82 309.3 430 46.5
Prupe.1G500200 Prunus persica HOM05D005355 ORTHO05D006591 2.1e-80 303.9 428 46.0
CSS0006134 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 2.3e-79 300.4 441 46.3
Sabra02G0066400 Salix brachista HOM05D005355 ORTHO05D006591 5.1e-79 299.3 454 45.4
Glyma.04G250500 Glycine max HOM05D005355 ORTHO05D006591 6.7e-79 298.9 420 47.4
MD00G1157400 Malus domestica HOM05D005355 ORTHO05D006591 9.7e-78 295.0 473 43.1
CiPaw.06G029200 Carya illinoinensis HOM05D005355 ORTHO05D006591 3.7e-77 293.1 437 43.2
CsaV3_2G014020 Cucumis sativus L. HOM05D005355 ORTHO05D006591 4.8e-77 292.7 423 46.1
CAN.G127.21 Capsicum annuum HOM05D005355 ORTHO05D006591 1.4e-76 291.2 432 44.9
PGR044G2411 Punica granatum HOM05D005355 ORTHO05D006591 1.8e-76 290.8 441 44.0
Ca_15194_v3 Cicer arietinum L. HOM05D005355 ORTHO05D006591 9.1e-76 288.5 431 45.5
VMungo1309G2754 Vigna mungo HOM05D005355 ORTHO05D006591 1.2e-75 288.1 431 44.8
QL09p035410 Quercus lobata HOM05D005355 ORTHO05D006591 3.4e-75 286.6 450 43.3
Thecc.08G123400 Theobroma cacao HOM05D005355 ORTHO05D006591 7.7e-75 285.4 449 43.9
Glyma.06G112300 Glycine max HOM05D005355 ORTHO05D006591 1.3e-74 284.6 420 46.7
Nn5g28219 Nelumbo nucifera HOM05D005355 ORTHO05D006591 1.7e-74 284.3 436 46.1
PSO170G1761 Papaver somniferum HOM05D005355 ORTHO05D006591 1.7e-74 284.3 433 44.6
FAN27G0453 Fragaria x ananassa HOM05D005355 ORTHO05D006591 5.0e-74 282.7 418 44.7
PSO528G0270 Papaver somniferum HOM05D005355 ORTHO05D006591 5.0e-74 282.7 429 44.5
FAN20G1264 Fragaria x ananassa HOM05D005355 ORTHO05D006591 8.5e-74 282.0 420 47.4
Sopen11g007660 Solanum pennellii HOM05D005355 ORTHO05D006591 8.5e-74 282.0 429 43.1
Hund27026 Selenicereus undatus HOM05D005355 ORTHO05D006591 1.9e-73 280.8 453 43.5
Medtr3g072480 Medicago truncatula HOM05D005355 ORTHO05D006591 3.2e-73 280.0 432 42.1
TWI12G0790 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 5.5e-73 279.3 401 45.1
FAN24G2565 Fragaria x ananassa HOM05D005355 ORTHO05D006591 1.6e-72 277.7 421 48.0
Sabra05G0133000 Salix brachista HOM05D005355 ORTHO05D006591 1.6e-72 277.7 527 39.3
Solyc11g012920.3 Solanum lycopersicum HOM05D005355 ORTHO05D006591 2.1e-72 277.3 429 42.9
Duzib116G0422 Durio zibethinus HOM05D005355 ORTHO05D006591 2.7e-72 276.9 457 42.5
CANSAT25G1794 Cannabis sativa HOM05D005355 ORTHO05D006591 1.0e-71 275.0 439 43.3
Duzib093G2154 Durio zibethinus HOM05D005355 ORTHO05D006591 1.0e-71 275.0 426 45.5
TWI56G0611 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 1.0e-71 275.0 403 45.4
MSTRG.326 Avicennia marina HOM05D005355 ORTHO05D006591 2.3e-71 273.9 431 42.5
TAR625G0673 Trochodendron aralioides HOM05D005355 ORTHO05D006591 3.0e-71 273.5 419 44.2
arahy.Tifrunner.gnm1.ann1.SCI4MN Arachis hypogaea HOM05D005355 ORTHO05D006591 5.2e-71 272.7 433 46.7
Dinv27329 Davidia involucrata HOM05D005355 ORTHO05D006591 6.7e-71 272.3 421 46.1
ClCG08G005570 Citrullus lanatus HOM05D005355 ORTHO05D006591 2.6e-70 270.4 406 48.8
Potri.005G176400 Populus trichocarpa HOM05D005355 ORTHO05D006591 4.4e-70 269.6 526 38.8
arahy.Tifrunner.gnm1.ann1.Y2U2DK Arachis hypogaea HOM05D005355 ORTHO05D006591 9.7e-70 268.5 433 45.3
Gorai.009G245100 Gossypium raimondii HOM05D005355 ORTHO05D006591 9.7e-70 268.5 440 43.4
Gorai.010G049600 Gossypium raimondii HOM05D005355 ORTHO05D006591 1.3e-69 268.1 448 42.4
EL10Ac1g01045 Beta vulgaris HOM05D005355 ORTHO05D006591 1.1e-68 265.0 426 43.7
Thhalv10029139m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 1.1e-68 265.0 413 44.1
Oeu062052.1 Olea europaea HOM05D005355 ORTHO05D006591 1.1e-68 265.0 425 42.1
Gohir.A06G043600 Gossypium hirsutum HOM05D005355 ORTHO05D006591 1.4e-68 264.6 445 42.5
Os11g0544600 Oryza sativa ssp. japonica HOM05D005355 ORTHO05D006591 1.8e-68 264.2 426 44.6
Phvul.009G124200 Phaseolus vulgaris HOM05D005355 ORTHO05D006591 9.1e-68 261.9 430 41.4
MBI06_g20714_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 2.0e-67 260.8 424 43.4
Psat5g132440 Pisum sativum HOM05D005355 ORTHO05D006591 3.5e-67 260.0 463 41.0
SGA_v2.0_scaffold122G33176 Striga asiatica HOM05D005355 ORTHO05D006591 1.1e-65 255.0 426 44.6
Migut.F01876 Erythranthe guttata HOM05D005355 ORTHO05D006591 3.2e-65 253.4 439 43.7
RcHm_v2.0_Chr6g0295601 Rosa chinensis HOM05D005355 ORTHO05D006591 3.2e-65 253.4 421 42.5
Lj1g0013612 Lotus japonicus HOM05D005355 ORTHO05D006591 4.2e-65 253.1 433 42.7
Cpa.g.sc36.50 Carica papaya HOM05D005355 ORTHO05D006591 7.2e-65 252.3 413 41.2
A10p07350 Brassica napus HOM05D005355 ORTHO05D006591 6.1e-64 249.2 385 46.5
Gohir.A05G234400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 6.1e-64 249.2 423 42.3
Gohir.D06G044400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 8.0e-64 248.8 448 41.1
BraSC36t46079Z Brassica rapa HOM05D005355 ORTHO05D006591 1.0e-63 248.4 387 46.0
MELO3C010600.2 Cucumis melo HOM05D005355 ORTHO05D006591 1.8e-63 247.7 386 44.8
Gohir.D05G236700 Gossypium hirsutum HOM05D005355 ORTHO05D006591 3.0e-63 246.9 419 42.7
Lj4A622G14 Lonicera japonica HOM05D005355 ORTHO05D006591 3.0e-63 246.9 382 44.0
Cc00_g04310 Coffea canephora HOM05D005355 ORTHO05D006591 1.2e-62 245.0 401 41.9
Lalb_Chr08g0241491 Lupinus albus HOM05D005355 ORTHO05D006591 1.5e-62 244.6 455 41.8
TPR.G24014 Trifolium pratense HOM05D005355 ORTHO05D006591 2.0e-62 244.2 429 42.7
Zm00001eb113700 Zea mays HOM05D005355 ORTHO05D006591 3.3e-62 243.4 410 45.1
Aqoxy6G00187 Aquilegia oxysepala HOM05D005355 ORTHO05D006591 4.4e-62 243.0 419 39.9
FAN15G2971 Fragaria x ananassa HOM05D005355 ORTHO05D006591 9.7e-62 241.9 446 42.8
Sp6g09690 Schrenkiella parvula HOM05D005355 ORTHO05D006591 2.8e-61 240.4 421 43.5
Thhalv10011453m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 1.1e-60 238.4 400 42.2
Cfa016002 Carpinus fangiana HOM05D005355 ORTHO05D006591 4.1e-60 236.5 377 43.2
Sc01g0001210 Simmondsia chinensis HOM05D005355 ORTHO05D006591 4.1e-60 236.5 389 43.7
AL1G52440 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 2.0e-59 234.2 407 41.8
BcaB07g33934 Brassica carinata HOM05D005355 ORTHO05D006591 1.3e-58 231.5 382 45.0
ATR0104G007 Amborella trichopoda HOM05D005355 ORTHO05D006591 1.7e-58 231.1 459 37.9
THA.LOC104817273 Tarenaya hassleriana HOM05D005355 ORTHO05D006591 1.7e-58 231.1 411 40.4
DCAR_011614 Daucus carota HOM05D005355 ORTHO05D006591 3.8e-58 229.9 316 50.0
AL6G42080 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 5.0e-58 229.6 428 40.9
C06p00770 Brassica napus HOM05D005355 ORTHO05D006591 6.5e-58 229.2 391 42.5
unitig_52.g17510 Utricularia gibba HOM05D005355 ORTHO05D006467 6.5e-58 229.2 460 36.7
Sp1g33640 Schrenkiella parvula HOM05D005355 ORTHO05D006591 1.5e-57 228.0 402 40.0
Aa31LG9G14260 Aethionema arabicum HOM05D005355 ORTHO05D006591 2.5e-57 227.3 419 39.9
CDE06G1640 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 2.5e-57 227.3 406 42.1
FvH4_2g26711 Fragaria vesca HOM05D005355 ORTHO05D006591 5.5e-57 226.1 381 45.4
CARHR259390 Cardamine hirsuta HOM05D005355 ORTHO05D006591 7.2e-57 225.7 411 39.2
RhsimUnG0093800 Rhododendron simsii HOM05D005355 ORTHO05D006591 7.2e-57 225.7 401 41.9
AT1G44780 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 4.7e-56 223.0 401 40.9
AT4G08310 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 1.0e-55 221.9 407 40.8
Carub.0006s2687 Capsella rubella HOM05D005355 ORTHO05D006591 4.0e-55 219.9 397 42.1
Nitab4.5_0001803g0130 Nicotiana tabacum HOM05D005355 ORTHO05D006591 5.2e-55 219.5 361 42.7
BolC6t35219H Brassica oleracea HOM05D005355 ORTHO05D006591 2.2e-53 214.2 365 42.2
vmacro00824 Vaccinium macrocarpon HOM05D005355 ORTHO05D006591 2.8e-53 213.8 580 32.9
CARHR036040 Cardamine hirsuta HOM05D005355 ORTHO05D006591 4.1e-52 209.9 396 40.7
Sed0010827 Sechium edule HOM05D005355 ORTHO05D006591 1.2e-51 208.4 333 45.9
Haze_00460 Corylus avellana HOM05D005355 ORTHO05D006591 1.3e-50 204.9 337 42.4
BcaC08g42867 Brassica carinata HOM05D005355 ORTHO05D006591 2.9e-50 203.8 377 40.6
Atru.chr13.1433 Acer truncatum HOM05D005355 ORTHO05D006591 8.6e-50 202.2 268 48.9
MBI15_g20159_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 1.9e-49 201.1 408 38.5
AUR62019052 Chenopodium quinoa HOM05D005355 ORTHO05D006591 2.5e-49 200.7 384 38.5
SHI29459 Sapria himalayana HOM05D005355 ORTHO05D006591 9.5e-49 198.7 408 35.3
MBI15_g24178_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 3.6e-48 196.8 409 37.9
Pp3c21_16190 Physcomitrium patens HOM05D005355 ORTHO05D006591 5.7e-38 162.9 439 36.2
COL.COLO4_35946 Corchorus olitorius HOM05D005355 ORTHO05D006591 1.8e-36 157.9 357 33.9
Mapoly0004s0202 Marchantia polymorpha HOM05D005355 ORTHO05D006591 2.5e-33 147.5 428 31.1
AUR62027892 Chenopodium quinoa HOM05D005355 ORTHO05D006591 4.3e-33 146.7 360 36.9
SMO230G0121 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 2.6e-30 137.5 422 29.6
MBI15_g20157_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D010248 9.8e-30 135.6 246 41.5
arahy.Tifrunner.gnm1.ann1.V8LFJN Arachis hypogaea HOM05D005355 ORTHO05D006591 2.9e-29 134.0 283 37.1
CDE06G0823 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 2.9e-29 134.0 117 62.4
AagrBONN_evm.TU.Sc2ySwM_362.1810 Anthoceros agrestis HOM05D005355 ORTHO05D006591 5.4e-28 129.8 463 28.7
CDE06G1231 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 1.1e-25 122.1 269 34.6
Carub.0001s3530 Capsella rubella HOM05D005355 ORTHO05D006591 1.9e-25 121.3 104 55.8
MBI15_g19197_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 2.5e-25 120.9 237 39.2
SMO367G1068 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 2.8e-24 117.5 392 28.3
Atru.chr13.1434 Acer truncatum HOM05D005355 ORTHO05D006591 5.8e-22 109.8 164 42.1
Peaxi162Scf00914g00033 Petunia axillaris HOM05D005355 ORTHO05D006591 4.9e-21 106.7 265 36.6
HPP92_011157 Vanilla planifolia HOM05D005355 ORTHO05D006591 1.9e-20 104.8 397 28.7
CBR_g29492 Chara braunii HOM05D005355 ORTHO05D006591 3.0e-18 97.4 99 50.5
SMO230G0058 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 9.5e-17 92.4 93 51.6
Cpa.g.sc36.52 Carica papaya HOM05D005355 ORTHO05D006591 3.6e-16 90.5 170 36.5
Nitab4.5_0001273g0020 Nicotiana tabacum HOM05D005355 ORTHO05D006591 8.1e-16 89.4 295 29.8
DCAR_011615 Daucus carota HOM05D005355 ORTHO05D006591 1.3e-13 82.0 63 65.1
Nitab4.5_0001803g0110 Nicotiana tabacum HOM05D005355 ORTHO05D006591 6.4e-13 79.7 58 62.1
Nitab4.5_0001273g0010 Nicotiana tabacum HOM05D005355 ORTHO05D006591 1.2e-11 75.5 56 60.7
Nn8g40262 Nelumbo nucifera HOM05D005355 ORTHO05D006591 1.0e-10 72.4 58 58.6
SGA_v2.0_scaffold340G49302 Striga asiatica HOM05D005355 ORTHO05D006591 1.7e-10 71.6 127 39.4
SEGI_25872 Sequoiadendron giganteum HOM05D005355 ORTHO05D006591 8.7e-10 69.3 279 28.0
SGA_v2.0_scaffold340G49301 Striga asiatica HOM05D005355 ORTHO05D006591 4.0e-07 60.5 66 50.0
Cre12.g539750 Chlamydomonas reinhardtii HOM05D005355 ORTHO05D006591 5.8e-06 56.6 92 39.1
MBI15_g42534_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 7.6e-06 56.2 56 50.0


User provided reference genes

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