Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G0348 Erigeron canadensis HOM05D005651 ORTHO05D006877 0.0e+00 2017.3 1024 100.0
HanXRQChr14g0436391 Helianthus annuus HOM05D005651 ORTHO05D006877 0.0e+00 1447.6 1195 65.3
Lsat_1_v5_gn_2_47921 Lactuca sativa HOM05D005651 ORTHO05D006877 0.0e+00 1308.9 1238 60.1
Actinidia13837 Actinidia chinensis HOM05D005651 ORTHO05D006877 1.4e-307 1059.7 1209 49.0
Lj3C272T4 Lonicera japonica HOM05D005651 ORTHO05D006877 5.0e-300 1034.6 1165 50.5
Rhsim02G0090700 Rhododendron simsii HOM05D005651 ORTHO05D006877 1.3e-295 1020.0 1149 49.1
GSVIVG01031569001 Vitis vinifera HOM05D005651 ORTHO05D006877 2.4e-294 1015.8 1178 48.5
RcHm_v2.0_Chr4g0412511 Rosa chinensis HOM05D005651 ORTHO05D006877 2.0e-280 969.5 1211 45.6
Oeu050724.1 Olea europaea HOM05D005651 ORTHO05D006877 5.3e-278 961.4 1114 49.5
TAR362G0451 Trochodendron aralioides HOM05D005651 ORTHO05D006877 1.2e-277 960.3 1212 46.4
Prupe.1G172400 Prunus persica HOM05D005651 ORTHO05D006877 1.0e-276 957.2 1217 45.9
Cc03_g09140 Coffea canephora HOM05D005651 ORTHO05D006877 1.7e-276 956.4 1216 45.3
RcHm_v2.0_Chr4g0412451 Rosa chinensis HOM05D005651 ORTHO05D006877 8.0e-274 947.6 1211 44.8
FvH4_4g12860 Fragaria vesca HOM05D005651 ORTHO05D006877 1.4e-270 936.8 1208 44.1
FAN12G2514 Fragaria x ananassa HOM05D005651 ORTHO05D006877 2.4e-270 936.0 1208 44.0
Nn8g41263 Nelumbo nucifera HOM05D005651 ORTHO05D006877 5.5e-267 924.9 1155 45.9
QL06p027298 Quercus lobata HOM05D005651 ORTHO05D006877 3.0e-265 919.1 1213 44.8
Migut.G00953 Erythranthe guttata HOM05D005651 ORTHO05D006877 1.2e-264 917.1 1192 45.1
CANSAT78G1330 Cannabis sativa HOM05D005651 ORTHO05D006877 2.0e-264 916.4 1202 44.8
FAN17G0433 Fragaria x ananassa HOM05D005651 ORTHO05D006877 9.8e-264 914.1 1208 43.9
MD04G1022200 Malus domestica HOM05D005651 ORTHO05D006877 4.9e-263 911.8 1238 43.4
Peaxi162Scf00017g02338 Petunia axillaris HOM05D005651 ORTHO05D006877 6.1e-258 894.8 1223 42.5
Haze_11684 Corylus avellana HOM05D005651 ORTHO05D006877 2.0e-256 889.8 1324 41.4
SalBow1G5228 Salvia bowleyana HOM05D005651 ORTHO05D006877 2.6e-256 889.4 1195 44.2
Ciclev10004169m.g Citrus clementina HOM05D005651 ORTHO05D006877 1.4e-254 883.6 1214 43.3
SalBow1G5941 Salvia bowleyana HOM05D005651 ORTHO05D006877 4.1e-254 882.1 1195 43.9
Gohir.D02G018500 Gossypium hirsutum HOM05D005651 ORTHO05D006877 9.2e-254 880.9 1213 42.3
Sopen03g033090 Solanum pennellii HOM05D005651 ORTHO05D006877 2.0e-253 879.8 1221 42.7
COL.COLO4_35960 Corchorus olitorius HOM05D005651 ORTHO05D006877 4.6e-253 878.6 1181 42.9
Gohir.A02G016900 Gossypium hirsutum HOM05D005651 ORTHO05D006877 1.5e-251 873.6 1210 42.1
Aqoxy2G04074 Aquilegia oxysepala HOM05D005651 ORTHO05D006877 2.5e-251 872.8 1214 43.1
Gorai.005G022800 Gossypium raimondii HOM05D005651 ORTHO05D006877 2.5e-251 872.8 1210 42.1
Sabra02G0177500 Salix brachista HOM05D005651 ORTHO05D006877 9.5e-251 870.9 1212 42.7
Cpa.g.sc157.13 Carica papaya HOM05D005651 ORTHO05D006877 1.2e-250 870.5 1208 42.9
Thecc.04G191000 Theobroma cacao HOM05D005651 ORTHO05D006877 1.6e-250 870.2 1209 42.8
Potri.002G232700 Populus trichocarpa HOM05D005651 ORTHO05D006877 1.1e-249 867.5 1218 43.2
SGA_v2.0_scaffold12G06118 Striga asiatica HOM05D005651 ORTHO05D006877 6.8e-249 864.8 1207 42.8
Lj6g0020014 Lotus japonicus HOM05D005651 ORTHO05D006877 4.9e-247 858.6 1204 42.0
Duzib212G0903 Durio zibethinus HOM05D005651 ORTHO05D006877 6.4e-247 858.2 1127 44.5
TPR.G18109 Trifolium pratense HOM05D005651 ORTHO05D006877 3.2e-246 855.9 1207 42.6
Glyma.11G253600 Glycine max HOM05D005651 ORTHO05D006877 8.6e-244 847.8 1202 41.4
FAN07G2778 Fragaria x ananassa HOM05D005651 ORTHO05D006877 2.1e-242 843.2 1087 44.4
CAN.G781.41 Capsicum annuum HOM05D005651 ORTHO05D006877 2.3e-241 839.7 1254 41.3
PSO063G2404 Papaver somniferum HOM05D005651 ORTHO05D006877 2.6e-240 836.3 1214 42.0
TWI56G0421 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 7.5e-240 834.7 1146 43.3
MBI11_g07399_MAGBIO Magnolia biondii HOM05D005651 ORTHO05D006877 1.7e-239 833.6 1246 42.2
Solyc03g114040.3 Solanum lycopersicum HOM05D005651 ORTHO05D006877 2.2e-239 833.2 1266 40.2
Sed0004152 Sechium edule HOM05D005651 ORTHO05D006877 1.4e-238 830.5 1198 40.2
Medtr3g084640 Medicago truncatula HOM05D005651 ORTHO05D006877 4.6e-237 825.5 1202 41.4
Ca_16431_v3 Cicer arietinum L. HOM05D005651 ORTHO05D006877 8.6e-236 821.2 1209 41.0
PGR083G1656 Punica granatum HOM05D005651 ORTHO05D006877 1.1e-235 820.8 1214 40.9
VMungo1383G2894 Vigna mungo HOM05D005651 ORTHO05D006877 4.3e-235 818.9 1206 40.6
ClCG08G003660 Citrullus lanatus HOM05D005651 ORTHO05D006877 2.1e-234 816.6 1198 40.6
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea HOM05D005651 ORTHO05D006877 1.4e-233 813.9 1204 39.9
PSO017G3585 Papaver somniferum HOM05D005651 ORTHO05D006877 6.8e-233 811.6 1191 41.6
CiPaw.01G113500 Carya illinoinensis HOM05D005651 ORTHO05D006877 6.4e-231 805.1 1052 44.2
Eucgr.H02630 Eucalyptus grandis HOM05D005651 ORTHO05D006877 1.1e-230 804.3 1209 39.9
Nitab4.5_0001422g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 4.6e-229 798.9 1228 40.1
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea HOM05D005651 ORTHO05D006877 6.0e-229 798.5 1206 39.9
Manes.05G198800 Manihot esculenta HOM05D005651 ORTHO05D006877 3.3e-227 792.7 1040 44.7
Phvul.001G265000 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 1.6e-226 790.4 1204 40.0
Sc25g0005740 Simmondsia chinensis HOM05D005651 ORTHO05D006877 2.8e-226 789.6 1207 39.9
Lalb_Chr24g0394531 Lupinus albus HOM05D005651 ORTHO05D006877 1.7e-223 780.4 1116 41.7
AT4G14180 Arabidopsis thaliana HOM05D005651 ORTHO05D006877 2.1e-221 773.5 1187 38.8
AL7G42200 Arabidopsis lyrata HOM05D005651 ORTHO05D006877 6.2e-218 761.9 1189 38.7
Sp5g13520 Schrenkiella parvula HOM05D005651 ORTHO05D006877 5.8e-216 755.4 1173 38.9
THA.LOC104808673 Tarenaya hassleriana HOM05D005651 ORTHO05D006877 6.4e-215 751.9 1206 38.0
arahy.Tifrunner.gnm1.ann1.4U9R65 Arachis hypogaea HOM05D005651 ORTHO05D006877 5.4e-214 748.8 1223 38.3
Carub.0007s2821 Capsella rubella HOM05D005651 ORTHO05D006877 5.4e-214 748.8 1190 38.6
C03p35350 Brassica napus HOM05D005651 ORTHO05D006877 3.5e-213 746.1 1189 37.8
BcaC01g04643 Brassica carinata HOM05D005651 ORTHO05D006877 2.3e-212 743.4 1185 37.8
BolC3t15845H Brassica oleracea HOM05D005651 ORTHO05D006877 2.3e-212 743.4 1185 37.8
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea HOM05D005651 ORTHO05D006877 5.6e-211 738.8 1213 38.2
A03p29160 Brassica napus HOM05D005651 ORTHO05D006877 7.4e-211 738.4 1190 37.3
Aa31LG9G3210 Aethionema arabicum HOM05D005651 ORTHO05D006877 3.1e-209 733.0 1186 37.5
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 2.9e-207 726.5 1180 38.2
BcaB01g02715 Brassica carinata HOM05D005651 ORTHO05D006877 5.5e-206 722.2 1191 36.7
DCAR_026668 Daucus carota HOM05D005651 ORTHO05D006877 7.1e-206 721.8 1215 37.9
CsaV3_6G003070 Cucumis sativus L. HOM05D005651 ORTHO05D006877 7.9e-205 718.4 1050 40.2
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 1.1e-203 714.5 1266 37.2
AUR62018536 Chenopodium quinoa HOM05D005651 ORTHO05D006877 8.2e-202 708.4 1195 38.0
Thhalv10027320m.g Eutrema salsugineum HOM05D005651 ORTHO05D006877 1.2e-197 694.5 1140 37.2
EL10Ac3g07437 Beta vulgaris HOM05D005651 ORTHO05D006877 1.0e-196 691.4 1196 36.9
Cfa008665 Carpinus fangiana HOM05D005651 ORTHO05D006877 1.3e-191 674.5 641 55.7
Ah.04g149640 Amaranthus hybridus HOM05D005651 ORTHO05D006877 8.8e-188 661.8 1109 37.2
Os04g0347800 Oryza sativa ssp. japonica HOM05D005651 ORTHO05D006877 5.5e-182 642.5 1081 36.7
Nitab4.5_0009569g0040 Nicotiana tabacum HOM05D005651 ORTHO05D006877 4.4e-179 632.9 924 41.7
Atru.chr3.1765 Acer truncatum HOM05D005651 ORTHO05D006877 1.3e-178 631.3 858 43.2
SHI01044 Sapria himalayana HOM05D005651 ORTHO05D006877 1.3e-175 621.3 1059 36.8
Dinv32168 Davidia involucrata HOM05D005651 ORTHO05D006877 3.5e-168 596.7 753 46.7
unitig_748.g8008 Utricularia gibba HOM05D005651 ORTHO05D006877 1.2e-165 588.2 831 42.0
Zm00001eb389920 Zea mays HOM05D005651 ORTHO05D006877 1.3e-151 541.6 998 34.6
CDE02G2388 Ceratophyllum demersum HOM05D005651 ORTHO05D006877 4.0e-148 530.0 1034 35.5
Psat2g094320 Pisum sativum HOM05D005651 ORTHO05D006877 2.4e-145 520.8 580 48.8
Phvul.004G062100 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 7.0e-145 519.2 840 36.4
Lj3C268T6 Lonicera japonica HOM05D005651 ORTHO05D006877 1.6e-136 491.5 754 40.5
SEGI_00340 Sequoiadendron giganteum HOM05D005651 ORTHO05D006877 6.6e-135 486.1 1204 30.4
MELO3C026127.2 Cucumis melo HOM05D005651 ORTHO05D006877 5.8e-131 473.0 815 35.1
CARHR220210 Cardamine hirsuta HOM05D005651 ORTHO05D006877 6.4e-130 469.5 585 44.8
Dinv32169 Davidia involucrata HOM05D005651 ORTHO05D006877 1.6e-128 464.9 398 61.6
Lj3A268T25 Lonicera japonica HOM05D005651 ORTHO05D006877 8.4e-122 442.6 408 58.8
vmacro15590 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 8.4e-122 442.6 667 39.7
PGSC0003DMG400024589 Solanum tuberosum HOM05D005651 ORTHO05D006877 1.2e-80 305.8 358 46.6
Atru.chr3.1766 Acer truncatum HOM05D005651 ORTHO05D006877 2.1e-80 305.1 332 51.8
HPP92_024561 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.3e-77 295.8 414 42.5
CARHR220220 Cardamine hirsuta HOM05D005651 ORTHO05D006877 5.3e-76 290.4 401 40.1
Phvul.006G051700 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 3.4e-75 287.7 401 44.1
Prupe.1G176200 Prunus persica HOM05D005651 ORTHO05D006877 2.9e-74 284.6 456 40.8
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 2.9e-66 258.1 381 39.9
Psat2g094280 Pisum sativum HOM05D005651 ORTHO05D006877 7.9e-64 250.0 389 37.3
Mapoly0195s0003 Marchantia polymorpha HOM05D005651 ORTHO05D006877 2.6e-62 245.0 640 29.5
Pp3c15_15330 Physcomitrium patens HOM05D005651 ORTHO05D006877 2.9e-58 231.5 1169 22.8
Nitab4.5_0009569g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 9.4e-49 199.9 287 41.1
vmacro15591 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 3.8e-42 177.9 311 38.6
HPP92_024560 Vanilla planifolia HOM05D005651 ORTHO05D006877 7.7e-35 153.7 179 44.7
CSS0048714 Camellia sinensis var. sinensis HOM05D005651 ORTHO05D006877 5.9e-27 127.5 137 51.8
TWI56G0074 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 3.9e-26 124.8 111 55.9
unitig_748.g8007 Utricularia gibba HOM05D005651 ORTHO05D006877 2.3e-23 115.5 144 41.0
TPR.G28787 Trifolium pratense HOM05D005651 ORTHO05D006877 8.1e-16 90.5 111 43.2
FAN22G0619 Fragaria x ananassa HOM05D005651 ORTHO05D006877 1.1e-15 90.1 121 43.0
CBR_g39378 Chara braunii HOM05D005651 ORTHO05D006877 1.8e-15 89.4 440 22.7
Lj5P691T0 Lonicera japonica HOM05D005651 ORTHO05D006877 1.5e-14 86.3 96 49.0
TAR633G2085 Trochodendron aralioides HOM05D005651 ORTHO05D006877 4.4e-14 84.7 75 54.7
BcaB01g02718 Brassica carinata HOM05D005651 ORTHO05D006877 3.7e-13 81.6 90 47.8
Eucgr.F02519 Eucalyptus grandis HOM05D005651 ORTHO05D006877 3.2e-12 78.6 65 55.4
SHI01039 Sapria himalayana HOM05D005651 ORTHO05D006877 6.8e-07 60.8 99 37.4


User provided reference genes

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