Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G0113 Erigeron canadensis HOM05D001318 ORTHO05D001152 3.9e-222 774.6 436 100.0
ClCG04G004280 Citrullus lanatus HOM05D001318 ORTHO05D001152 1.3e-10 72.0 161 33.5
CiPaw.09G046200 Carya illinoinensis HOM05D001318 ORTHO05D001152 3.7e-10 70.5 159 34.0
ECA233G3037 Erigeron canadensis HOM05D001318 ORTHO05D001152 3.7e-10 70.5 158 33.5
HanXRQChr13g0405811 Helianthus annuus HOM05D001318 ORTHO05D001152 4.8e-10 70.1 74 52.7
MSTRG.26151 Avicennia marina HOM05D001318 ORTHO05D001152 8.2e-10 69.3 165 32.7
CsaV3_4G027800 Cucumis sativus L. HOM05D001318 ORTHO05D001152 8.2e-10 69.3 161 31.1
MELO3C019053.2 Cucumis melo HOM05D001318 ORTHO05D001152 1.8e-09 68.2 161 31.1
ECA248G0665 Erigeron canadensis HOM05D001318 ORTHO05D001152 1.8e-09 68.2 160 32.5
Duzib093G0720 Durio zibethinus HOM05D001318 ORTHO05D001152 2.4e-09 67.8 168 30.4
Cfa020022 Carpinus fangiana HOM05D001318 ORTHO05D001152 5.3e-09 66.6 159 33.3
Sed0001996 Sechium edule HOM05D001318 ORTHO05D001152 5.3e-09 66.6 162 29.6
DCAR_020552 Daucus carota HOM05D001318 ORTHO05D001152 9.0e-09 65.9 168 32.7
Duzib128G1139 Durio zibethinus HOM05D001318 ORTHO05D001152 9.0e-09 65.9 158 29.1
Ciclev10021153m.g Citrus clementina HOM05D001318 ORTHO05D001152 1.2e-08 65.5 168 31.0
COL.COLO4_05694 Corchorus olitorius HOM05D001318 ORTHO05D001152 1.2e-08 65.5 169 30.2
Duzib106G0060 Durio zibethinus HOM05D001318 ORTHO05D001152 1.2e-08 65.5 74 50.0
FAN02G2982 Fragaria x ananassa HOM05D001318 ORTHO05D001152 1.2e-08 65.5 74 45.9
Actinidia09271 Actinidia chinensis HOM05D001318 ORTHO05D001152 1.5e-08 65.1 165 29.1
Ca_13045_v3 Cicer arietinum L. HOM05D001318 ORTHO05D001152 2.0e-08 64.7 61 57.4
RcHm_v2.0_Chr2g0125341 Rosa chinensis HOM05D001318 ORTHO05D001152 2.0e-08 64.7 57 54.4
CSS0040626 Camellia sinensis var. sinensis HOM05D001318 ORTHO05D001152 2.6e-08 64.3 168 31.0
HanXRQChr02g0057311 Helianthus annuus HOM05D001318 ORTHO05D001152 2.6e-08 64.3 57 54.4
Lsat_1_v5_gn_6_52880 Lactuca sativa HOM05D001318 ORTHO05D001152 2.6e-08 64.3 75 45.3
SalBow1G1179 Salvia bowleyana HOM05D001318 ORTHO05D001152 2.6e-08 64.3 165 29.7
Dinv30169 Davidia involucrata HOM05D001318 ORTHO05D001152 3.4e-08 63.9 167 30.5
FvH4_6g25280 Fragaria vesca HOM05D001318 ORTHO05D001152 3.4e-08 63.9 57 54.4
Gohir.A02G112715 Gossypium hirsutum HOM05D001318 ORTHO05D001152 3.4e-08 63.9 165 30.9
Manes.09G006900 Manihot esculenta HOM05D001318 ORTHO05D001152 3.4e-08 63.9 73 47.9
Nn2g14861 Nelumbo nucifera HOM05D001318 ORTHO05D001152 3.4e-08 63.9 168 29.8
Sabra06G0028000 Salix brachista HOM05D001318 ORTHO05D001152 3.4e-08 63.9 168 30.4
Cc06_g18910 Coffea canephora HOM05D001318 ORTHO05D001152 4.5e-08 63.5 166 30.7
FAN05G0449 Fragaria x ananassa HOM05D001318 ORTHO05D001152 4.5e-08 63.5 74 44.6
Sp6g38650 Schrenkiella parvula HOM05D001318 ORTHO05D001152 4.5e-08 63.5 119 37.0
TPR.G19658 Trifolium pratense HOM05D001318 ORTHO05D001152 4.5e-08 63.5 79 49.4
Psat6g084560 Pisum sativum HOM05D001318 ORTHO05D001152 5.9e-08 63.2 56 58.9
MSTRG.6379 Avicennia marina HOM05D001318 ORTHO05D001152 7.7e-08 62.8 57 54.4
Potri.006G041200 Populus trichocarpa HOM05D001318 ORTHO05D001152 7.7e-08 62.8 168 30.4
SalBow3G0733 Salvia bowleyana HOM05D001318 ORTHO05D001152 7.7e-08 62.8 104 35.6
Actinidia38153 Actinidia chinensis HOM05D001318 ORTHO05D001152 1.0e-07 62.4 167 31.1
Gorai.007G353400 Gossypium raimondii HOM05D001318 ORTHO05D001152 1.0e-07 62.4 78 44.9
Prupe.7G042200 Prunus persica HOM05D001318 ORTHO05D001152 1.0e-07 62.4 61 49.2
BcaB04g21220 Brassica carinata HOM05D001318 ORTHO05D001152 1.3e-07 62.0 110 38.2
CANSAT64G1516 Cannabis sativa HOM05D001318 ORTHO05D001152 1.3e-07 62.0 67 49.3
Cpa.g.sc5.211 Carica papaya HOM05D001318 ORTHO05D001152 1.3e-07 62.0 70 45.7
Eucgr.A02260 Eucalyptus grandis HOM05D001318 ORTHO05D001152 1.3e-07 62.0 120 36.7
Gohir.A11G308000 Gossypium hirsutum HOM05D001318 ORTHO05D001152 1.3e-07 62.0 74 48.6
Gohir.D11G323400 Gossypium hirsutum HOM05D001318 ORTHO05D001152 1.3e-07 62.0 78 44.9
MSTRG.10795 Avicennia marina HOM05D001318 ORTHO05D001152 1.7e-07 61.6 57 54.4
CARHR084730 Cardamine hirsuta HOM05D001318 ORTHO05D001152 1.7e-07 61.6 59 50.8
Thhalv10021137m.g Eutrema salsugineum HOM05D001318 ORTHO05D001152 1.7e-07 61.6 57 52.6
Lj5g0023816 Lotus japonicus HOM05D001318 ORTHO05D001152 1.7e-07 61.6 79 48.1
Medtr1g051245 Medicago truncatula HOM05D001318 ORTHO05D001152 1.7e-07 61.6 61 55.7
Gohir.D03G071100 Gossypium hirsutum HOM05D001318 ORTHO05D001152 2.2e-07 61.2 78 46.2
MBI13_g10208_MAGBIO Magnolia biondii HOM05D001318 ORTHO05D001152 2.2e-07 61.2 166 28.9
Oeu004745.2 Olea europaea HOM05D001318 ORTHO05D001152 2.2e-07 61.2 143 31.5
QL07p008869 Quercus lobata HOM05D001318 ORTHO05D001152 2.2e-07 61.2 74 45.9
SGA_v2.0_scaffold6G03296 Striga asiatica HOM05D001318 ORTHO05D001152 2.2e-07 61.2 61 45.9
Migut.N00562 Erythranthe guttata HOM05D001318 ORTHO05D001152 2.9e-07 60.8 61 47.5
SHI28287 Sapria himalayana HOM05D001318 ORTHO05D001152 2.9e-07 60.8 60 48.3
Sp3g08520 Schrenkiella parvula HOM05D001318 ORTHO05D001152 2.9e-07 60.8 110 38.2
AL3G21580 Arabidopsis lyrata HOM05D001318 ORTHO05D001152 3.8e-07 60.5 57 52.6
AT3G10250 Arabidopsis thaliana HOM05D001318 ORTHO05D001152 3.8e-07 60.5 57 52.6
MSTRG.18017 Avicennia marina HOM05D001318 ORTHO05D001152 3.8e-07 60.5 61 49.2
MD12G1093600 Malus domestica HOM05D001318 ORTHO05D001152 3.8e-07 60.5 57 49.1
Rhsim04G0110700 Rhododendron simsii HOM05D001318 ORTHO05D001152 3.8e-07 60.5 167 29.3
SGA_v2.0_scaffold105G30303 Striga asiatica HOM05D001318 ORTHO05D001152 3.8e-07 60.5 61 49.2
TAR633G2548 Trochodendron aralioides HOM05D001318 ORTHO05D001152 3.8e-07 60.5 166 28.9
Cpa.g.sc405.3 Carica papaya HOM05D001318 ORTHO05D001152 5.0e-07 60.1 42 69.0
Cc01_g00850 Coffea canephora HOM05D001318 ORTHO05D001152 5.0e-07 60.1 65 47.7
Gorai.003G088900 Gossypium raimondii HOM05D001318 ORTHO05D001152 5.0e-07 60.1 73 47.9
MD00G1088600 Malus domestica HOM05D001318 ORTHO05D001152 5.0e-07 60.1 57 49.1
PGR031G3066 Punica granatum HOM05D001318 ORTHO05D001152 5.0e-07 60.1 57 52.6
SGA_v2.0_scaffold69G23143 Striga asiatica HOM05D001318 ORTHO05D001152 5.0e-07 60.1 61 50.8
TPR.G9319 Trifolium pratense HOM05D001318 ORTHO05D001152 5.0e-07 60.1 58 53.4
A05p38860 Brassica napus HOM05D001318 ORTHO05D001152 6.5e-07 59.7 57 50.9
TWI53G1542 Tripterygium wilfordii HOM05D001318 ORTHO05D001152 6.5e-07 59.7 57 50.9
TWI74G0127 Tripterygium wilfordii HOM05D001318 ORTHO05D001152 6.5e-07 59.7 57 50.9
BcaC09g48105 Brassica carinata HOM05D001318 ORTHO05D001152 8.5e-07 59.3 57 50.9
BolC1t05411H Brassica oleracea HOM05D001318 ORTHO05D001152 8.5e-07 59.3 57 50.9
DCAR_023816 Daucus carota HOM05D000287 ORTHO05D000319 8.5e-07 59.3 163 31.3
Lj1A1103G57 Lonicera japonica HOM05D001318 ORTHO05D001152 8.5e-07 59.3 159 31.4
Lalb_Chr25g0286881 Lupinus albus HOM05D001318 ORTHO05D001152 8.5e-07 59.3 57 54.4
THA.LOC104826888 Tarenaya hassleriana HOM05D001318 ORTHO05D001152 8.5e-07 59.3 57 50.9
Thecc.05G138800 Theobroma cacao HOM05D001318 ORTHO05D001152 8.5e-07 59.3 74 47.3
Aqoxy2G00354 Aquilegia oxysepala HOM05D001318 ORTHO05D001152 1.1e-06 58.9 60 48.3
BcaNung05527 Brassica carinata HOM05D001318 ORTHO05D001152 1.1e-06 58.9 57 50.9
A01p41960 Brassica napus HOM05D001318 ORTHO05D001152 1.1e-06 58.9 57 50.9
Carub.0003s0942 Capsella rubella HOM05D001318 ORTHO05D001152 1.1e-06 58.9 57 50.9
unitig_8.g4559 Utricularia gibba HOM05D001318 ORTHO05D001152 1.1e-06 58.9 54 48.1
QL07p008880 Quercus lobata HOM05D001318 ORTHO05D001152 1.4e-06 58.5 57 50.9
TAR636G0484 Trochodendron aralioides HOM05D001318 ORTHO05D001152 1.4e-06 58.5 167 28.1
AT5G04090 Arabidopsis thaliana HOM05D001318 ORTHO05D001152 1.9e-06 58.2 104 38.5
BraA01t04263Z Brassica rapa HOM05D001318 ORTHO05D001152 1.9e-06 58.2 57 50.9
BraA05t22678Z Brassica rapa HOM05D001318 ORTHO05D001152 1.9e-06 58.2 57 49.1
Glyma.03G129900 Glycine max HOM05D001318 ORTHO05D001152 1.9e-06 58.2 57 52.6
Oeu029497.1 Olea europaea HOM05D001318 ORTHO05D001152 1.9e-06 58.2 63 49.2
THA.LOC104823210 Tarenaya hassleriana HOM05D001318 ORTHO05D001152 1.9e-06 58.2 57 49.1
Oeu063774.1 Olea europaea HOM05D001318 ORTHO05D001152 2.5e-06 57.8 156 29.5
PSO384G1334 Papaver somniferum HOM05D001318 ORTHO05D001152 2.5e-06 57.8 156 27.6
Pp3c14_2570 Physcomitrium patens HOM05D001318 ORTHO05D001152 2.5e-06 57.8 73 42.5
Pp3c14_2574 Physcomitrium patens HOM05D001318 ORTHO05D001152 2.5e-06 57.8 73 42.5
TWI77G0987 Tripterygium wilfordii HOM05D001318 ORTHO05D001152 2.5e-06 57.8 57 49.1
C05p57900 Brassica napus HOM05D001318 ORTHO05D001152 3.2e-06 57.4 57 49.1
BolC5t34445H Brassica oleracea HOM05D001318 ORTHO05D001152 3.2e-06 57.4 57 49.1
Lsat_1_v5_gn_5_159601 Lactuca sativa HOM05D001318 ORTHO05D001152 3.2e-06 57.4 143 31.5
SalBow1G0421 Salvia bowleyana HOM05D001318 ORTHO05D001152 3.2e-06 57.4 57 50.9
SalBow6G4517 Salvia bowleyana HOM05D001318 ORTHO05D001152 3.2e-06 57.4 57 49.1
Migut.K00130 Erythranthe guttata HOM05D001318 ORTHO05D001152 4.2e-06 57.0 57 49.1
Thhalv10014351m.g Eutrema salsugineum HOM05D001318 ORTHO05D001152 4.2e-06 57.0 95 34.7
Glyma.19G132200 Glycine max HOM05D001318 ORTHO05D001152 4.2e-06 57.0 57 50.9
Peaxi162Scf00970g00160 Petunia axillaris HOM05D001318 ORTHO05D001152 4.2e-06 57.0 165 29.1
Pp3c10_2410 Physcomitrium patens HOM05D001318 ORTHO05D001152 4.2e-06 57.0 73 42.5
Sabra16G0040000 Salix brachista HOM05D001318 ORTHO05D001152 4.2e-06 57.0 83 41.0
Sabra16G0044700 Salix brachista HOM05D001318 ORTHO05D001152 4.2e-06 57.0 83 41.0
Sed0006150 Sechium edule HOM05D001318 ORTHO05D001152 4.2e-06 57.0 57 52.6
SEGI_03112 Sequoiadendron giganteum HOM05D001318 ORTHO05D001152 4.2e-06 57.0 64 45.3
VMungo1383G1291 Vigna mungo HOM05D001318 ORTHO05D001152 4.2e-06 57.0 58 50.0
Dinv08513 Davidia involucrata HOM05D001318 ORTHO05D001152 5.5e-06 56.6 74 48.6
Lalb_Chr01g0017181 Lupinus albus HOM05D001318 ORTHO05D001152 5.5e-06 56.6 57 52.6
Nitab4.5_0000515g0050 Nicotiana tabacum HOM05D001318 ORTHO05D001152 5.5e-06 56.6 170 28.8
Nitab4.5_0002208g0090 Nicotiana tabacum HOM05D001318 ORTHO05D001152 5.5e-06 56.6 164 28.7
Oeu058887.1 Olea europaea HOM05D001318 ORTHO05D001152 5.5e-06 56.6 65 49.2
Phvul.001G125700 Phaseolus vulgaris HOM05D001318 ORTHO05D001152 5.5e-06 56.6 57 50.9
Potri.016G038100 Populus trichocarpa HOM05D001318 ORTHO05D001152 5.5e-06 56.6 61 49.2
PGSC0003DMG400029840 Solanum tuberosum HOM05D001318 ORTHO05D001152 5.5e-06 56.6 65 49.2
Aa31LG3G2810 Aethionema arabicum HOM05D001318 ORTHO05D001152 7.2e-06 56.2 57 45.6
MSTRG.18879 Avicennia marina HOM05D001318 ORTHO05D001152 7.2e-06 56.2 61 49.2
Nn7g36658 Nelumbo nucifera HOM05D001318 ORTHO05D001152 7.2e-06 56.2 57 47.4
Nitab4.5_0000571g0130 Nicotiana tabacum HOM05D001318 ORTHO05D001152 7.2e-06 56.2 164 28.7
Sc19g0008260 Simmondsia chinensis HOM05D001318 ORTHO05D001152 7.2e-06 56.2 84 41.7
HanXRQChr13g0392951 Helianthus annuus HOM05D001318 ORTHO05D001152 9.4e-06 55.8 52 50.0
Medtr7g090270 Medicago truncatula HOM05D001318 ORTHO05D001152 9.4e-06 55.8 131 34.4
TPR.G9310 Trifolium pratense HOM05D001318 ORTHO05D001152 9.4e-06 55.8 58 53.4


User provided reference genes

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