Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G5108 Erigeron canadensis HOM05D002759 ORTHO05D003290 1.1e-80 303.1 141 100.0
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 5.5e-16 88.2 138 34.1
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 1.0e-14 84.0 141 32.6
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 3.7e-12 75.5 134 30.6
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 1.1e-11 73.9 132 31.1
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 3.1e-11 72.4 134 29.9
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 4.1e-11 72.0 134 29.9
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 4.1e-11 72.0 131 30.5
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 7.0e-11 71.2 132 29.5
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 9.1e-11 70.9 128 28.9
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 1.2e-10 70.5 132 28.8
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 5.9e-10 68.2 132 27.3
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 1.3e-09 67.0 123 30.9
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 6.5e-09 64.7 132 28.8
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 6.5e-09 64.7 162 25.9
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 8.5e-09 64.3 160 28.1
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 1.1e-08 63.9 135 28.9
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 1.1e-08 63.9 136 29.4
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 1.5e-08 63.5 132 28.8
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 1.5e-08 63.5 132 28.8
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 1.5e-08 63.5 142 26.8
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 2.5e-08 62.8 129 28.7
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 2.5e-08 62.8 135 29.6
Thhalv10029518m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 3.2e-08 62.4 123 30.1
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 7.2e-08 61.2 136 27.9
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 7.2e-08 61.2 136 28.7
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 9.4e-08 60.8 132 28.8
Cpa.g.sc148.31 Carica papaya HOM05D002759 ORTHO05D003290 9.4e-08 60.8 172 23.8
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 9.4e-08 60.8 132 24.2
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 1.2e-07 60.5 162 24.1
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 2.1e-07 59.7 156 27.6
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 2.1e-07 59.7 136 27.9
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 2.1e-07 59.7 136 27.9
A03p53910 Brassica napus HOM05D002759 ORTHO05D003290 3.6e-07 58.9 130 27.7
BraA03t14460Z Brassica rapa HOM05D002759 ORTHO05D003290 3.6e-07 58.9 130 27.7
Cfa017189 Carpinus fangiana HOM05D002759 ORTHO05D003290 8.0e-07 57.8 122 28.7
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 8.0e-07 57.8 114 28.9
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 1.0e-06 57.4 120 27.5
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 1.4e-06 57.0 121 28.9
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 1.4e-06 57.0 127 26.0
MD00G1166400 Malus domestica HOM05D002759 ORTHO05D003290 1.4e-06 57.0 129 24.8
MD15G1418900 Malus domestica HOM05D002759 ORTHO05D003290 1.4e-06 57.0 129 24.8
Glyma.15G048100 Glycine max HOM05D002759 ORTHO05D003290 2.3e-06 56.2 127 26.8
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 2.3e-06 56.2 122 27.0
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 3.0e-06 55.8 68 35.3
Oeu008876.1 Olea europaea HOM05D002759 ORTHO05D003290 3.0e-06 55.8 59 39.0
Gorai.002G207900 Gossypium raimondii HOM05D002759 ORTHO05D003290 4.0e-06 55.5 132 26.5
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 4.0e-06 55.5 144 22.9
Sc19g0000800 Simmondsia chinensis HOM05D002759 ORTHO05D003290 4.0e-06 55.5 133 27.1
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 5.2e-06 55.1 131 26.0
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 5.2e-06 55.1 125 26.4
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 5.2e-06 55.1 137 24.1
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 6.7e-06 54.7 73 31.5
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 6.7e-06 54.7 127 27.6
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 8.8e-06 54.3 131 25.2
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 8.8e-06 54.3 73 31.5
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 8.8e-06 54.3 137 26.3


User provided reference genes

Program Settings