Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G5005 Erigeron canadensis HOM05D004815 ORTHO05D005742 8.8e-204 713.4 357 100.0
HanXRQChr04g0121731 Helianthus annuus HOM05D004815 ORTHO05D005742 3.1e-156 555.4 340 81.5
HanXRQChr06g0169351 Helianthus annuus HOM05D004815 ORTHO05D005742 1.4e-153 546.6 359 77.4
Lsat_1_v5_gn_7_8041 Lactuca sativa HOM05D004815 ORTHO05D005742 1.9e-150 536.2 342 78.9
TWI23G0970 Tripterygium wilfordii HOM05D004815 ORTHO05D005742 1.5e-123 446.8 365 62.7
Haze_16704 Corylus avellana HOM05D004815 ORTHO05D005742 2.6e-123 446.0 373 63.0
Cfa001810 Carpinus fangiana HOM05D004815 ORTHO05D005742 5.0e-122 441.8 375 63.2
Ciclev10020702m.g Citrus clementina HOM05D004815 ORTHO05D005742 6.5e-122 441.4 374 61.8
Potri.014G078300 Populus trichocarpa HOM05D004815 ORTHO05D005742 6.5e-122 441.4 365 64.4
Potri.002G152300 Populus trichocarpa HOM05D004815 ORTHO05D005742 7.2e-121 438.0 368 63.3
TPR.G17395 Trifolium pratense HOM05D004815 ORTHO05D005742 9.4e-121 437.6 372 62.4
Medtr8g033040 Medicago truncatula HOM05D004815 ORTHO05D005742 2.1e-120 436.4 369 62.9
Lj3g0020425 Lotus japonicus HOM05D004815 ORTHO05D005742 6.1e-120 434.9 372 62.1
Ca_23774_v3 Cicer arietinum L. HOM05D004815 ORTHO05D005742 7.9e-120 434.5 364 62.4
Lj7C524T7 Lonicera japonica HOM05D004815 ORTHO05D005742 1.4e-119 433.7 365 64.7
CiPaw.01G257600 Carya illinoinensis HOM05D004815 ORTHO05D005742 3.0e-119 432.6 376 60.1
Sabra14G0053800 Salix brachista HOM05D004815 ORTHO05D005742 3.9e-119 432.2 373 63.3
TAR629G0568 Trochodendron aralioides HOM05D004815 ORTHO05D005742 6.7e-119 431.4 374 60.4
Aqoxy7G00483 Aquilegia oxysepala HOM05D004815 ORTHO05D005742 2.0e-118 429.9 371 61.2
Actinidia31455 Actinidia chinensis HOM05D004815 ORTHO05D005742 2.6e-118 429.5 379 60.9
Cc02_g37080 Coffea canephora HOM05D004815 ORTHO05D005742 4.4e-118 428.7 371 61.7
Atru.chr5.381_Atru.chr5.382 Acer truncatum HOM05D004815 ORTHO05D005742 7.4e-118 427.9 366 61.7
GSVIVG01027589001 Vitis vinifera HOM05D004815 ORTHO05D005742 2.2e-117 426.4 374 60.4
MD02G1195800 Malus domestica HOM05D004815 ORTHO05D005742 2.8e-117 426.0 376 59.8
arahy.Tifrunner.gnm1.ann1.32Q5MD Arachis hypogaea HOM05D004815 ORTHO05D005742 1.1e-116 424.1 368 61.4
FAN01G1324 Fragaria x ananassa HOM05D004815 ORTHO05D005742 1.4e-116 423.7 374 59.6
RcHm_v2.0_Chr1g0351921 Rosa chinensis HOM05D004815 ORTHO05D005742 1.4e-116 423.7 374 59.6
arahy.Tifrunner.gnm1.ann1.GZV6IQ Arachis hypogaea HOM05D004815 ORTHO05D005742 1.8e-116 423.3 366 61.2
MSTRG.20784 Avicennia marina HOM05D004815 ORTHO05D005742 4.1e-116 422.2 371 59.8
TPR.G17590 Trifolium pratense HOM05D004815 ORTHO05D005742 1.2e-115 420.6 366 60.7
FAN10G2694 Fragaria x ananassa HOM05D004815 ORTHO05D005742 2.6e-115 419.5 374 59.4
Cc09_g02920 Coffea canephora HOM05D004815 ORTHO05D005742 3.4e-115 419.1 370 61.1
Gohir.A07G144600 Gossypium hirsutum HOM05D004815 ORTHO05D005742 4.5e-115 418.7 375 59.5
TAR636G2513 Trochodendron aralioides HOM05D004815 ORTHO05D005742 4.5e-115 418.7 372 58.9
MELO3C022521.2 Cucumis melo HOM05D004815 ORTHO05D005742 5.9e-115 418.3 374 58.3
Cpa.g.sc18.178 Carica papaya HOM05D004815 ORTHO05D005742 1.3e-114 417.2 373 60.3
SGA_v2.0_scaffold153G37057 Striga asiatica HOM05D004815 ORTHO05D005742 1.3e-114 417.2 362 61.3
Glyma.03G018700 Glycine max HOM05D004815 ORTHO05D005742 6.5e-114 414.8 373 61.7
CsaV3_6G005940 Cucumis sativus L. HOM05D004815 ORTHO05D005742 8.5e-114 414.5 374 58.6
Gorai.001G172600 Gossypium raimondii HOM05D004815 ORTHO05D005742 2.5e-113 412.9 375 59.7
Lalb_Chr17g0340041 Lupinus albus HOM05D004815 ORTHO05D005742 4.2e-113 412.1 372 58.6
VMungo0331G0142 Vigna mungo HOM05D004815 ORTHO05D005742 4.2e-113 412.1 371 60.9
Duzib133G0793 Durio zibethinus HOM05D004815 ORTHO05D005742 5.5e-113 411.8 376 59.8
SalBow7G0216 Salvia bowleyana HOM05D004815 ORTHO05D005742 5.5e-113 411.8 414 54.1
Gohir.D07G150500 Gossypium hirsutum HOM05D004815 ORTHO05D005742 1.2e-112 410.6 375 59.5
Manes.01G263200 Manihot esculenta HOM05D004815 ORTHO05D005742 4.7e-112 408.7 372 58.9
Manes.05G040900 Manihot esculenta HOM05D004815 ORTHO05D005742 4.7e-112 408.7 374 59.6
Thecc.01G370200 Theobroma cacao HOM05D004815 ORTHO05D005742 6.1e-112 408.3 372 59.4
TWI59G0538 Tripterygium wilfordii HOM05D004815 ORTHO05D005742 1.0e-111 407.5 376 57.4
PGR031G2979 Punica granatum HOM05D004815 ORTHO05D005742 3.9e-111 405.6 369 57.7
CANSAT56G0719 Cannabis sativa HOM05D004815 ORTHO05D005742 5.2e-111 405.2 374 57.2
AUR62033376 Chenopodium quinoa HOM05D004815 ORTHO05D005742 5.2e-111 405.2 375 59.5
PSO478G4379 Papaver somniferum HOM05D004815 ORTHO05D005742 1.5e-110 403.7 366 56.6
PGSC0003DMG400000005 Solanum tuberosum HOM05D004815 ORTHO05D005742 2.0e-110 403.3 373 57.4
Solyc01g091900.3 Solanum lycopersicum HOM05D004815 ORTHO05D005742 2.6e-110 402.9 373 57.4
DCAR_006900 Daucus carota HOM05D004815 ORTHO05D005742 3.3e-110 402.5 340 62.4
Lalb_Chr10g0097591 Lupinus albus HOM05D004815 ORTHO05D005742 3.3e-110 402.5 372 58.1
Sed0027777 Sechium edule HOM05D004815 ORTHO05D005742 3.3e-110 402.5 377 55.7
Migut.B01673 Erythranthe guttata HOM05D004815 ORTHO05D005742 9.7e-110 401.0 361 58.2
EL10Ac1g00976 Beta vulgaris HOM05D004815 ORTHO05D005742 1.7e-109 400.2 371 58.0
A05p05650 Brassica napus HOM05D004815 ORTHO05D005742 1.7e-109 400.2 368 57.6
FAN06G3277 Fragaria x ananassa HOM05D004815 ORTHO05D005742 1.7e-109 400.2 371 57.7
FAN06G3416 Fragaria x ananassa HOM05D004815 ORTHO05D005742 1.7e-109 400.2 371 57.7
BraA05t19537Z Brassica rapa HOM05D004815 ORTHO05D005742 2.2e-109 399.8 368 57.6
Rhsim07G0022400 Rhododendron simsii HOM05D004815 ORTHO05D005742 2.8e-109 399.4 365 60.0
C03p30200 Brassica napus HOM05D004815 ORTHO05D005742 8.2e-109 397.9 372 57.0
BcaC01g05112 Brassica carinata HOM05D004815 ORTHO05D005742 1.4e-108 397.1 373 56.8
Nitab4.5_0013229g0020 Nicotiana tabacum HOM05D004815 ORTHO05D005742 1.4e-108 397.1 374 57.0
Thhalv10001499m.g Eutrema salsugineum HOM05D004815 ORTHO05D005742 2.4e-108 396.4 371 56.9
BolC3t15369H Brassica oleracea HOM05D004815 ORTHO05D005742 7.0e-108 394.8 372 56.5
CAN.G170.62 Capsicum annuum HOM05D004815 ORTHO05D005742 7.0e-108 394.8 373 56.3
BcaC02g12192 Brassica carinata HOM05D004815 ORTHO05D005742 9.1e-108 394.4 368 56.5
BolC4t22283H Brassica oleracea HOM05D004815 ORTHO05D005742 9.1e-108 394.4 368 56.2
PSO782G2788 Papaver somniferum HOM05D004815 ORTHO05D005742 1.6e-107 393.7 366 56.0
Sp4g27730 Schrenkiella parvula HOM05D004815 ORTHO05D005742 1.6e-107 393.7 373 57.1
Psat4g200880 Pisum sativum HOM05D004815 ORTHO05D005742 2.6e-107 392.9 346 61.3
BcaB01g03258 Brassica carinata HOM05D004815 ORTHO05D005742 7.7e-107 391.3 369 56.6
BcaB02g09018 Brassica carinata HOM05D004815 ORTHO05D005742 7.7e-107 391.3 380 56.6
A03p25310 Brassica napus HOM05D004815 ORTHO05D005742 1.0e-106 391.0 369 57.2
Oeu059223.1 Olea europaea HOM05D003859 ORTHO05D004927 1.3e-106 390.6 372 58.1
Sabra02G0120600 Salix brachista HOM05D004815 ORTHO05D005742 2.2e-106 389.8 368 57.6
Aa31LG1G27160 Aethionema arabicum HOM05D004815 ORTHO05D005742 2.5e-105 386.3 375 56.5
vmacro13348 Vaccinium macrocarpon HOM05D004815 ORTHO05D005742 3.2e-105 386.0 398 55.5
Lalb_Chr19g0127171 Lupinus albus HOM05D004815 ORTHO05D005742 7.2e-105 384.8 377 57.0
Carub.0004s2834 Capsella rubella HOM05D004815 ORTHO05D005742 1.2e-104 384.0 375 56.5
BraA03t11735Z Brassica rapa HOM05D004815 ORTHO05D005742 2.1e-104 383.3 368 55.7
Glyma.07G080200 Glycine max HOM05D004815 ORTHO05D005742 3.6e-104 382.5 355 60.3
Peaxi162Scf00021g00232 Petunia axillaris HOM05D004815 ORTHO05D005742 8.0e-104 381.3 350 59.1
AL4G44860 Arabidopsis lyrata HOM05D004815 ORTHO05D005742 4.4e-102 375.6 372 55.6
AT2G45690 Arabidopsis thaliana HOM05D004815 ORTHO05D005742 5.7e-102 375.2 371 54.2
QL08p050919 Quercus lobata HOM05D004815 ORTHO05D005742 7.5e-102 374.8 350 57.4
ClCG06G000170 Citrullus lanatus HOM05D004815 ORTHO05D005742 6.3e-101 371.7 374 53.7
Hund27330 Selenicereus undatus HOM05D004815 ORTHO05D005742 1.4e-100 370.5 388 55.2
unitig_749.g14360 Utricularia gibba HOM05D003518 ORTHO05D005164 2.7e-99 366.3 348 57.5
Sc02g0002260 Simmondsia chinensis HOM05D004815 ORTHO05D005742 4.5e-99 365.5 360 55.6
MBI04_g28567_MAGBIO Magnolia biondii HOM05D004815 ORTHO05D005742 2.9e-98 362.8 358 54.7
C04p06610 Brassica napus HOM05D004815 ORTHO05D005742 2.5e-97 359.8 346 55.2
CAN.G919.13 Capsicum annuum HOM05D004815 ORTHO05D005742 5.5e-97 358.6 378 50.5
Phvul.010G089200 Phaseolus vulgaris HOM05D004815 ORTHO05D005742 4.7e-96 355.5 348 58.0
Sopen06g030930 Solanum pennellii HOM05D004815 ORTHO05D005742 1.8e-95 353.6 364 50.5
Solyc06g074460.4 Solanum lycopersicum HOM05D004815 ORTHO05D005742 4.0e-95 352.4 364 50.3
Actinidia09581 Actinidia chinensis HOM05D004815 ORTHO05D005742 2.6e-94 349.7 323 58.2
Ciclev10023945m.g Citrus clementina HOM05D004815 ORTHO05D005742 7.5e-94 348.2 362 53.6
FvH4_7g12840 Fragaria vesca HOM05D004815 ORTHO05D005742 7.5e-94 348.2 333 55.9
Nn1g01309 Nelumbo nucifera HOM05D004815 ORTHO05D005742 1.7e-93 347.1 326 58.0
Duzib138G1778 Durio zibethinus HOM05D004815 ORTHO05D005742 1.2e-91 340.9 347 54.2
Nitab4.5_0001901g0030 Nicotiana tabacum HOM05D004815 ORTHO05D005742 1.3e-90 337.4 378 48.1
Lalb_Chr01g0021231 Lupinus albus HOM05D004815 ORTHO05D005742 1.7e-90 337.0 362 52.5
Prupe.2G152800 Prunus persica HOM05D004815 ORTHO05D005742 3.8e-90 335.9 295 61.7
Nitab4.5_0005459g0020 Nicotiana tabacum HOM05D004815 ORTHO05D005742 1.9e-89 333.6 395 47.3
Sopen01g037670 Solanum pennellii HOM05D004815 ORTHO05D005742 2.5e-89 333.2 325 55.7
HPP92_004960 Vanilla planifolia HOM05D004815 ORTHO05D005742 9.5e-89 331.3 377 49.3
Zm00001eb208530 Zea mays HOM05D004815 ORTHO05D005742 2.1e-88 330.1 381 46.7
AUR62004281 Chenopodium quinoa HOM05D004815 ORTHO05D005742 1.8e-87 327.0 378 50.8
THA.LOC104817269 Tarenaya hassleriana HOM05D004815 ORTHO05D005742 2.0e-86 323.6 335 52.5
Ah.15g094120 Amaranthus hybridus HOM05D001215 ORTHO05D001387 2.8e-85 319.7 363 51.0
Peaxi162Scf00114g00211 Petunia axillaris HOM05D004815 ORTHO05D005742 8.3e-85 318.2 350 48.9
MD02G1195700 Malus domestica HOM05D004815 ORTHO05D005742 5.4e-84 315.5 339 53.4
Sed0004795 Sechium edule HOM05D004815 ORTHO05D005742 1.9e-81 307.0 307 53.1
Dinv43746 Davidia involucrata HOM05D004815 ORTHO05D005742 2.6e-78 296.6 292 55.8
Nitab4.5_0001127g0010 Nicotiana tabacum HOM05D004815 ORTHO05D005742 3.3e-73 279.6 377 45.9
SEGI_15318 Sequoiadendron giganteum HOM05D004815 ORTHO05D005742 2.1e-72 276.9 372 41.7
Mapoly0047s0037 Marchantia polymorpha HOM05D004815 ORTHO05D005742 2.2e-69 266.9 407 40.8
Os02g0123200 Oryza sativa ssp. japonica HOM05D004815 ORTHO05D005742 4.1e-68 262.7 344 43.3
CARHR140910 Cardamine hirsuta HOM05D004815 ORTHO05D005742 4.6e-67 259.2 293 50.2
SHI13492 Sapria himalayana HOM05D004815 ORTHO05D005742 1.3e-66 257.7 470 37.4
AagrBONN_evm.TU.Sc2ySwM_228.5506 Anthoceros agrestis HOM05D004815 ORTHO05D005742 6.6e-66 255.4 372 39.0
CSS0047010 Camellia sinensis var. sinensis HOM05D004815 ORTHO05D005742 5.6e-65 252.3 277 52.7
COL.COLO4_12639 Corchorus olitorius HOM05D004815 ORTHO05D005742 4.0e-63 246.1 220 58.2
CSS0023679 Camellia sinensis var. sinensis HOM05D004815 ORTHO05D005742 1.2e-62 244.6 313 47.6
SMO147G0187 Selaginella moellendorffii HOM05D004815 ORTHO05D005742 1.5e-62 244.2 374 38.8
Eucgr.D02393 Eucalyptus grandis HOM05D004815 ORTHO05D005742 8.6e-58 228.4 243 53.5
ATR0757G223 Amborella trichopoda HOM05D004815 ORTHO05D005742 1.8e-55 220.7 249 50.6
Pp3c20_6130 Physcomitrium patens HOM05D004815 ORTHO05D005742 2.3e-55 220.3 325 39.1
Dinv32412 Davidia involucrata HOM05D004815 ORTHO05D005742 1.3e-53 214.5 263 49.0
PGSC0003DMG400007146 Solanum tuberosum HOM05D004815 ORTHO05D005742 1.7e-50 204.1 254 45.7
Eucgr.D02410 Eucalyptus grandis HOM05D004815 ORTHO05D005742 1.9e-49 200.7 237 49.4
Gohir.A11G084200 Gossypium hirsutum HOM05D004815 ORTHO05D005742 6.2e-48 195.7 248 47.6
CDE11G0368 Ceratophyllum demersum HOM05D004815 ORTHO05D005742 2.4e-47 193.7 193 50.8
AagrBONN_evm.TU.Sc2ySwM_369.172 Anthoceros agrestis HOM05D004815 ORTHO05D005742 1.5e-46 191.0 370 32.7
CDE11G0585 Ceratophyllum demersum HOM05D004815 ORTHO05D005742 2.4e-44 183.7 140 63.6
FAN10G0991 Fragaria x ananassa HOM05D004815 ORTHO05D005742 1.6e-40 171.0 118 66.9
Eucgr.D02397 Eucalyptus grandis HOM05D004815 ORTHO05D005742 2.6e-38 163.7 205 49.3
ATR0757G181 Amborella trichopoda HOM05D004815 ORTHO05D005742 4.2e-36 156.4 153 51.0
PRCOL_00005618 Prasinoderma coloniale HOM05D004815 ORTHO05D005742 2.3e-26 124.0 419 25.3
Aa31LG6G10720 Aethionema arabicum HOM05D004815 ORTHO05D005742 5.6e-25 119.4 150 49.3
Glyma.04G148600 Glycine max HOM05D004815 ORTHO05D005742 3.7e-24 116.7 73 74.0
CBR_g3181 Chara braunii HOM05D004815 ORTHO05D005742 4.8e-24 116.3 204 31.4
Aa31sc1021G10 Aethionema arabicum HOM05D004815 ORTHO05D005742 1.4e-15 88.2 123 42.3
COL.COLO4_24134 Corchorus olitorius HOM05D000638 ORTHO05D000801 7.6e-14 82.4 91 50.5
Lj3g0018651 Lotus japonicus HOM05D004815 ORTHO05D005742 5.5e-12 76.3 42 88.1


User provided reference genes

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