Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G4835 Erigeron canadensis HOM05D007721 ORTHO05D009811 3.0e-41 171.4 85 100.0
Lsat_1_v5_gn_8_56740 Lactuca sativa HOM05D007721 ORTHO05D009811 1.8e-33 145.6 85 83.5
GSVIVG01031536001 Vitis vinifera HOM05D007721 ORTHO05D009811 6.4e-28 127.1 83 72.3
CSS0018729 Camellia sinensis var. sinensis HOM05D007721 ORTHO05D009811 3.5e-26 121.3 83 68.7
Migut.D01985 Erythranthe guttata HOM05D007721 ORTHO05D009811 4.6e-26 120.9 84 67.9
Prupe.1G174200 Prunus persica HOM05D007721 ORTHO05D009811 3.9e-25 117.9 79 72.2
Actinidia06926 Actinidia chinensis HOM05D007721 ORTHO05D009811 8.7e-25 116.7 83 65.1
CiPaw.14G116700 Carya illinoinensis HOM05D007721 ORTHO05D009811 1.5e-24 115.9 83 67.5
RcHm_v2.0_Chr4g0411561 Rosa chinensis HOM05D007721 ORTHO05D009811 1.9e-24 115.5 73 79.5
Hma1.2p1_0055F.1_g031440 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 3.3e-24 114.8 82 64.6
Hma1.2p1_0591F.1_g185200 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 4.3e-24 114.4 82 64.6
Ciclev10017339m.g Citrus clementina HOM05D007721 ORTHO05D009811 5.6e-24 114.0 83 67.5
MD04G1023900 Malus domestica HOM05D007721 ORTHO05D009811 7.4e-24 113.6 76 73.7
Oeu013174.2 Olea europaea HOM05D007721 ORTHO05D009811 1.4e-22 109.4 78 69.2
FAN12G3598 Fragaria x ananassa HOM05D007721 ORTHO05D009811 1.8e-22 109.0 71 78.9
QL01p004762 Quercus lobata HOM05D007721 ORTHO05D009811 2.4e-22 108.6 71 73.2
QL01p004062 Quercus lobata HOM05D007721 ORTHO05D009811 5.3e-22 107.5 71 71.8
FAN07G1724 Fragaria x ananassa HOM05D007721 ORTHO05D009811 6.9e-22 107.1 71 77.5
FAN17G1673 Fragaria x ananassa HOM05D007721 ORTHO05D009811 6.9e-22 107.1 64 81.2
SalBow6G6016 Salvia bowleyana HOM05D007721 ORTHO05D009811 6.9e-22 107.1 84 61.9
Ah.06g193880 Amaranthus hybridus HOM05D007721 ORTHO05D009811 2.0e-21 105.5 72 68.1
Manes.06G162100 Manihot esculenta HOM05D007721 ORTHO05D009811 2.0e-21 105.5 82 65.9
Cc01_g05050 Coffea canephora HOM05D007721 ORTHO05D009811 2.6e-21 105.1 83 62.7
Eucgr.J00742 Eucalyptus grandis HOM05D007721 ORTHO05D009811 4.5e-21 104.4 75 66.7
Lj3g0008015 Lotus japonicus HOM05D007721 ORTHO05D009811 4.5e-21 104.4 85 60.0
SalBow6G6561 Salvia bowleyana HOM05D007721 ORTHO05D009811 4.5e-21 104.4 84 60.7
Potri.009G050900 Populus trichocarpa HOM05D007721 ORTHO05D009811 1.0e-20 103.2 73 74.0
Thecc.09G239100 Theobroma cacao HOM05D007721 ORTHO05D009811 1.0e-20 103.2 73 69.9
arahy.Tifrunner.gnm1.ann1.S4R3T1 Arachis hypogaea HOM05D007721 ORTHO05D009811 1.3e-20 102.8 77 63.6
CARHR200650 Cardamine hirsuta HOM05D007721 ORTHO05D009811 1.3e-20 102.8 73 69.9
arahy.Tifrunner.gnm1.ann1.MV9AMF Arachis hypogaea HOM05D007721 ORTHO05D009811 1.7e-20 102.4 77 63.6
Nn7g36378 Nelumbo nucifera HOM05D007721 ORTHO05D009811 1.7e-20 102.4 83 59.0
Phvul.010G051900 Phaseolus vulgaris HOM05D007721 ORTHO05D009811 1.7e-20 102.4 77 64.9
ECA248G3328 Erigeron canadensis HOM05D000152 ORTHO05D001046 2.9e-20 101.7 55 85.5
HanXRQChr04g0118971 Helianthus annuus HOM05D007721 ORTHO05D009811 2.9e-20 101.7 58 84.5
Os01g0939000 Oryza sativa ssp. japonica HOM05D007721 ORTHO05D009811 2.9e-20 101.7 71 67.6
Carub.0006s1099 Capsella rubella HOM05D007721 ORTHO05D009811 4.9e-20 100.9 73 67.1
vmacro04125 Vaccinium macrocarpon HOM05D007721 ORTHO05D009811 4.9e-20 100.9 68 66.2
Lalb_Chr07g0195541 Lupinus albus HOM05D007721 ORTHO05D009811 6.5e-20 100.5 77 64.9
Sed0010702 Sechium edule HOM05D007721 ORTHO05D009811 8.4e-20 100.1 71 70.4
Solyc10g079920.2 Solanum lycopersicum HOM05D007721 ORTHO05D009811 1.9e-19 99.0 68 69.1
Sopen10g030540 Solanum pennellii HOM05D007721 ORTHO05D009811 1.9e-19 99.0 68 69.1
Gohir.A05G070100 Gossypium hirsutum HOM05D007721 ORTHO05D009811 2.5e-19 98.6 79 58.2
unitig_746.g26884 Utricularia gibba HOM05D007721 ORTHO05D009811 2.5e-19 98.6 77 62.3
MELO3C014581.2 Cucumis melo HOM05D007721 ORTHO05D009811 5.5e-19 97.4 71 67.6
Nitab4.5_0000937g0060 Nicotiana tabacum HOM05D007721 ORTHO05D009811 5.5e-19 97.4 71 64.8
Glyma.03G114000 Glycine max HOM05D007721 ORTHO05D009811 7.1e-19 97.1 77 62.3
Potri.012G127000 Populus trichocarpa HOM05D007721 ORTHO05D009811 7.1e-19 97.1 73 68.5
Nitab4.5_0000677g0250 Nicotiana tabacum HOM05D007721 ORTHO05D009811 9.3e-19 96.7 67 67.2
Peaxi162Scf00069g00105 Petunia axillaris HOM05D007721 ORTHO05D009811 1.2e-18 96.3 68 67.6
TPR.G33115 Trifolium pratense HOM05D004530 ORTHO05D009811 1.2e-18 96.3 77 62.3
FAN22G0179 Fragaria x ananassa HOM05D007721 ORTHO05D009811 1.6e-18 95.9 85 62.4
Gorai.001G137300 Gossypium raimondii HOM05D007721 ORTHO05D009811 2.1e-18 95.5 77 61.0
Sp6g31180 Schrenkiella parvula HOM05D007721 ORTHO05D009811 6.0e-18 94.0 64 67.2
A10p25380 Brassica napus HOM05D007721 ORTHO05D009811 7.9e-18 93.6 72 62.5
Zm00001eb141680 Zea mays HOM05D007721 ORTHO05D009811 7.9e-18 93.6 71 64.8
Medtr7g102340 Medicago truncatula HOM05D007721 ORTHO05D009811 1.3e-17 92.8 77 58.4
SEGI_08983 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 3.9e-17 91.3 73 61.6
SEGI_33053 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 3.9e-17 91.3 73 61.6
BraA03t10703Z Brassica rapa HOM05D007721 ORTHO05D009811 6.7e-17 90.5 74 60.8
Dinv09950 Davidia involucrata HOM05D007721 ORTHO05D009811 6.7e-17 90.5 68 64.7
A03p14040 Brassica napus HOM05D007721 ORTHO05D009811 8.7e-17 90.1 75 60.0
A02p19730 Brassica napus HOM05D007721 ORTHO05D009811 1.5e-16 89.4 75 60.0
Gohir.A07G123300 Gossypium hirsutum HOM05D007721 ORTHO05D009811 1.9e-16 89.0 77 59.7
TAR623G1786 Trochodendron aralioides HOM05D007721 ORTHO05D009811 2.5e-16 88.6 68 64.7
BcaB05g24889 Brassica carinata HOM05D007721 ORTHO05D009811 4.3e-16 87.8 75 60.0
C03p16480 Brassica napus HOM05D007721 ORTHO05D009811 5.7e-16 87.4 75 57.3
BcaC03g15544 Brassica carinata HOM05D007721 ORTHO05D009811 7.4e-16 87.0 75 58.7
C02p32350 Brassica napus HOM05D007721 ORTHO05D009811 7.4e-16 87.0 75 58.7
AL6G23280 Arabidopsis lyrata HOM05D007721 ORTHO05D009811 1.6e-15 85.9 59 69.5
AL6G23350 Arabidopsis lyrata HOM05D007721 ORTHO05D009811 1.6e-15 85.9 59 69.5
BolC3t14068H Brassica oleracea HOM05D001160 ORTHO05D001092 1.6e-15 85.9 75 57.3
BcaC01g06369 Brassica carinata HOM05D007721 ORTHO05D009811 6.3e-15 84.0 75 56.0
BraA02t07009Z Brassica rapa HOM05D007721 ORTHO05D009811 6.3e-15 84.0 75 57.3
Carub.0008s1583 Capsella rubella HOM05D007721 ORTHO05D009811 1.4e-14 82.8 79 53.2
Thhalv10015165m.g Eutrema salsugineum HOM05D007721 ORTHO05D009811 1.4e-14 82.8 74 62.2
Nitab4.5_0000562g0070 Nicotiana tabacum HOM05D007721 ORTHO05D009811 1.4e-14 82.8 63 61.9
AagrBONN_evm.TU.Sc2ySwM_362.695 Anthoceros agrestis HOM05D007721 ORTHO05D009811 4.1e-14 81.3 76 57.9
Sc08g0006390 Simmondsia chinensis HOM05D007721 ORTHO05D009811 7.7e-13 77.0 76 55.3
Mapoly0048s0062 Marchantia polymorpha HOM05D007721 ORTHO05D009811 1.4e-11 72.8 71 50.7
SGA_v2.0_scaffold7G04151 Striga asiatica HOM05D000252 ORTHO05D000307 2.1e-10 68.9 56 62.5
TWI34G0772 Tripterygium wilfordii HOM05D007721 ORTHO05D009811 5.7e-08 60.8 43 67.4
SGA_v2.0_scaffold114G31816 Striga asiatica HOM05D007721 ORTHO05D009811 1.7e-07 59.3 49 61.2


User provided reference genes

Program Settings