Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G4733 Erigeron canadensis HOM05D003630 ORTHO05D004151 2.2e-58 228.8 119 100.0
Lsat_1_v5_gn_7_20981 Lactuca sativa HOM05D003630 ORTHO05D004151 1.2e-40 169.9 108 88.0
SalBow8G2511 Salvia bowleyana HOM05D003630 ORTHO05D004151 1.4e-36 156.4 119 67.2
HanXRQChr04g0123791 Helianthus annuus HOM05D003630 ORTHO05D004151 2.4e-36 155.6 114 76.3
Migut.H01476 Erythranthe guttata HOM05D003630 ORTHO05D004151 1.0e-34 150.2 126 68.3
CSS0035295 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 1.3e-34 149.8 125 68.0
Oeu029367.1 Olea europaea HOM05D003630 ORTHO05D004151 2.9e-34 148.7 122 69.7
Cc02_g13650 Coffea canephora HOM05D003630 ORTHO05D004151 4.9e-34 147.9 129 68.2
Migut.M01120 Erythranthe guttata HOM05D003630 ORTHO05D004151 6.5e-34 147.5 127 61.4
Manes.17G047900 Manihot esculenta HOM05D003630 ORTHO05D004151 6.5e-34 147.5 118 68.6
Lj6g0013661 Lotus japonicus HOM05D003630 ORTHO05D004151 1.4e-33 146.4 119 68.1
Gohir.A05G159800 Gossypium hirsutum HOM05D003630 ORTHO05D004151 4.2e-33 144.8 121 61.2
MSTRG.13203 Avicennia marina HOM05D003630 ORTHO05D004151 9.3e-33 143.7 122 68.0
TWI38G1513 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 9.3e-33 143.7 120 65.0
TAR626G1897 Trochodendron aralioides HOM05D003630 ORTHO05D004151 9.3e-33 143.7 122 63.1
Cpa.g.sc373.3 Carica papaya HOM05D003630 ORTHO05D004151 2.1e-32 142.5 123 65.0
arahy.Tifrunner.gnm1.ann1.H8XLFU Arachis hypogaea HOM05D003630 ORTHO05D004151 2.7e-32 142.1 119 67.2
arahy.Tifrunner.gnm1.ann1.S1G93A Arachis hypogaea HOM05D003630 ORTHO05D004151 2.7e-32 142.1 119 67.2
Gohir.D05G162500 Gossypium hirsutum HOM05D003630 ORTHO05D004151 2.7e-32 142.1 121 60.3
Phvul.006G183600 Phaseolus vulgaris HOM05D003630 ORTHO05D004151 4.6e-32 141.4 121 68.6
ATR0752G193 Amborella trichopoda HOM05D003630 ORTHO05D004151 6.0e-32 141.0 126 61.9
Nn1g04163 Nelumbo nucifera HOM05D003630 ORTHO05D004151 6.0e-32 141.0 122 65.6
Hma1.2p1_0208F.1_g088370 Hydrangea macrophylla HOM05D003630 ORTHO05D004151 1.0e-31 140.2 129 65.1
Oeu056100.2 Olea europaea HOM05D003630 ORTHO05D004151 1.0e-31 140.2 123 64.2
Actinidia07592 Actinidia chinensis HOM05D003630 ORTHO05D004151 1.3e-31 139.8 124 64.5
SGA_v2.0_scaffold100G29703 Striga asiatica HOM05D003630 ORTHO05D004151 1.3e-31 139.8 124 67.7
GSVIVG01021092001 Vitis vinifera HOM05D003630 ORTHO05D004151 1.8e-31 139.4 122 63.1
VMungo0540G1118 Vigna mungo HOM05D003630 ORTHO05D004151 3.0e-31 138.7 121 66.9
arahy.Tifrunner.gnm1.ann1.Q5B35H Arachis hypogaea HOM05D003630 ORTHO05D004151 3.9e-31 138.3 124 62.9
ClCG01G023140 Citrullus lanatus HOM05D003630 ORTHO05D004151 3.9e-31 138.3 124 64.5
Sed0024812 Sechium edule HOM05D003630 ORTHO05D004151 3.9e-31 138.3 120 65.0
PGSC0003DMG400029732 Solanum tuberosum HOM05D003630 ORTHO05D004151 5.1e-31 137.9 122 62.3
CiPaw.09G062300 Carya illinoinensis HOM05D003630 ORTHO05D004151 6.7e-31 137.5 123 63.4
CiPaw.10G051200 Carya illinoinensis HOM05D003630 ORTHO05D004151 6.7e-31 137.5 125 64.8
Duzib160G0312 Durio zibethinus HOM05D003630 ORTHO05D004151 8.7e-31 137.1 119 65.5
Dinv17335 Davidia involucrata HOM05D003630 ORTHO05D004151 2.5e-30 135.6 125 60.8
Nitab4.5_0003487g0100 Nicotiana tabacum HOM05D003630 ORTHO05D004151 2.5e-30 135.6 127 63.0
CANSAT35G1140 Cannabis sativa HOM05D003630 ORTHO05D004151 3.3e-30 135.2 128 63.3
Carub.0001s2678 Capsella rubella HOM05D003630 ORTHO05D004151 3.3e-30 135.2 124 60.5
Nitab4.5_0000516g0130 Nicotiana tabacum HOM05D003630 ORTHO05D004151 5.7e-30 134.4 127 62.2
QL05p041782 Quercus lobata HOM05D003630 ORTHO05D004151 5.7e-30 134.4 124 62.1
HanXRQChr01g0003821 Helianthus annuus HOM05D003630 ORTHO05D004151 7.4e-30 134.0 119 67.2
Peaxi162Scf01100g00009 Petunia axillaris HOM05D003630 ORTHO05D004151 9.6e-30 133.7 122 64.8
Sed0001316 Sechium edule HOM05D003630 ORTHO05D004151 9.6e-30 133.7 117 57.3
Solyc03g006360.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 9.6e-30 133.7 133 58.6
BcaB07g32449 Brassica carinata HOM05D003630 ORTHO05D004151 1.3e-29 133.3 121 59.5
Thhalv10009086m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 1.3e-29 133.3 125 60.0
Oeu012144.1 Olea europaea HOM05D003630 ORTHO05D004151 1.6e-29 132.9 126 61.9
Solyc02g077880.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 1.6e-29 132.9 122 61.5
Sopen02g022730 Solanum pennellii HOM05D003630 ORTHO05D004151 1.6e-29 132.9 122 61.5
unitig_749.g13657 Utricularia gibba HOM05D003630 ORTHO05D004151 1.6e-29 132.9 125 62.4
Medtr2g014240 Medicago truncatula HOM05D003630 ORTHO05D004151 2.1e-29 132.5 117 62.4
Sed0017838 Sechium edule HOM05D003630 ORTHO05D004151 2.1e-29 132.5 124 64.5
arahy.Tifrunner.gnm1.ann1.RY2Y1Z Arachis hypogaea HOM05D003630 ORTHO05D004151 2.8e-29 132.1 124 61.3
TAR624G0603 Trochodendron aralioides HOM05D003630 ORTHO05D004151 2.8e-29 132.1 122 54.1
PGSC0003DMG400012826 Solanum tuberosum HOM05D003630 ORTHO05D004151 3.7e-29 131.7 133 58.6
Lalb_Chr18g0059451 Lupinus albus HOM05D003630 ORTHO05D004151 4.8e-29 131.3 119 63.0
PGR004G0839 Punica granatum HOM05D003630 ORTHO05D004151 4.8e-29 131.3 126 59.5
CsaV3_6G050280 Cucumis sativus L. HOM05D003630 ORTHO05D004151 6.2e-29 131.0 124 63.7
ClCG03G008090 Citrullus lanatus HOM05D003630 ORTHO05D004151 8.2e-29 130.6 117 57.3
MSTRG.15866 Avicennia marina HOM05D003630 ORTHO05D004151 1.4e-28 129.8 121 59.5
AUR62017046 Chenopodium quinoa HOM05D003630 ORTHO05D004151 1.4e-28 129.8 123 60.2
MELO3C002620.2 Cucumis melo HOM05D003630 ORTHO05D004151 1.4e-28 129.8 117 59.0
CsaV3_1G012460 Cucumis sativus L. HOM05D003630 ORTHO05D004151 1.4e-28 129.8 118 59.3
Ah.09g237490 Amaranthus hybridus HOM05D003630 ORTHO05D004151 1.8e-28 129.4 123 58.5
BcaC05g26841 Brassica carinata HOM05D003630 ORTHO05D004151 1.8e-28 129.4 121 57.9
Lalb_Chr15g0089711 Lupinus albus HOM05D003630 ORTHO05D004151 1.8e-28 129.4 116 61.2
Glyma.13G237000 Glycine max HOM05D003630 ORTHO05D004151 2.4e-28 129.0 120 62.5
PGR042G3375 Punica granatum HOM05D003630 ORTHO05D004151 2.4e-28 129.0 123 62.6
vmacro15923 Vaccinium macrocarpon HOM05D003630 ORTHO05D004151 5.3e-28 127.9 127 57.5
CDE11G0243 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 9.0e-28 127.1 122 59.8
AUR62014851 Chenopodium quinoa HOM05D003630 ORTHO05D004151 1.5e-27 126.3 123 58.5
Ca_00350_v3 Cicer arietinum L. HOM05D003630 ORTHO05D004151 1.5e-27 126.3 117 60.7
BcaB02g10597 Brassica carinata HOM05D003630 ORTHO05D004151 2.0e-27 125.9 118 56.8
Gohir.A06G129700 Gossypium hirsutum HOM05D003630 ORTHO05D004151 2.0e-27 125.9 120 60.8
Gohir.D06G133900 Gossypium hirsutum HOM05D003630 ORTHO05D004151 2.0e-27 125.9 120 60.8
BcaC02g11461 Brassica carinata HOM05D003630 ORTHO05D004151 3.4e-27 125.2 118 55.9
MBI02_g32444_MAGBIO Magnolia biondii HOM05D003630 ORTHO05D004151 3.4e-27 125.2 131 63.4
Prupe.4G050800 Prunus persica HOM05D003630 ORTHO05D004151 3.4e-27 125.2 122 62.3
TPR.G16501 Trifolium pratense HOM05D003630 ORTHO05D004151 3.4e-27 125.2 117 59.0
C04p15210 Brassica napus HOM05D003630 ORTHO05D004151 5.8e-27 124.4 118 55.9
BolC4t23094H Brassica oleracea HOM05D003630 ORTHO05D004151 5.8e-27 124.4 118 55.9
DCAR_003387 Daucus carota HOM05D003630 ORTHO05D004151 7.6e-27 124.0 119 59.7
AT2G33830 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 1.3e-26 123.2 117 57.3
Lalb_Chr09g0327781 Lupinus albus HOM05D003630 ORTHO05D004151 1.7e-26 122.9 123 56.1
A05p11750 Brassica napus HOM05D003630 ORTHO05D004151 2.2e-26 122.5 118 55.1
BraA05t20119Z Brassica rapa HOM05D003630 ORTHO05D004151 2.2e-26 122.5 118 55.1
Dinv40586 Davidia involucrata HOM05D003630 ORTHO05D004151 2.2e-26 122.5 113 64.6
COL.COLO4_31436 Corchorus olitorius HOM05D003630 ORTHO05D004151 2.9e-26 122.1 109 63.3
THA.LOC104812301 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 2.9e-26 122.1 119 60.5
Atru.chr10.1820 Acer truncatum HOM05D003630 ORTHO05D004151 5.0e-26 121.3 110 61.8
Atru.chr10.1837 Acer truncatum HOM05D003630 ORTHO05D004151 5.0e-26 121.3 110 61.8
Thecc.06G183500 Theobroma cacao HOM05D003630 ORTHO05D004151 5.0e-26 121.3 109 61.5
RcHm_v2.0_Chr5g0008921 Rosa chinensis HOM05D003630 ORTHO05D004151 6.5e-26 120.9 121 60.3
Sp4g16220 Schrenkiella parvula HOM05D003630 ORTHO05D004151 6.5e-26 120.9 119 56.3
Glyma.15G076500 Glycine max HOM05D003630 ORTHO05D004151 8.4e-26 120.6 120 59.2
CSS0033873 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 1.1e-25 120.2 108 64.8
AL4G29600 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 1.4e-25 119.8 117 56.4
Manes.16G030000 Manihot esculenta HOM05D003630 ORTHO05D004151 1.4e-25 119.8 107 64.5
Carub.0004s1550 Capsella rubella HOM05D003630 ORTHO05D004151 1.9e-25 119.4 119 54.6
HPP92_018480 Vanilla planifolia HOM05D003630 ORTHO05D004151 1.9e-25 119.4 128 57.0
BolC3t14590H Brassica oleracea HOM05D003630 ORTHO05D004151 2.5e-25 119.0 116 53.4
HPP92_018482 Vanilla planifolia HOM05D003630 ORTHO05D004151 2.5e-25 119.0 128 57.0
TWI38G1867 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 3.2e-25 118.6 109 62.4
EL10Ac8g20421 Beta vulgaris HOM05D003630 ORTHO05D004151 4.2e-25 118.2 126 54.8
FvH4_3g08830 Fragaria vesca HOM05D003630 ORTHO05D004151 4.2e-25 118.2 120 56.7
FAN11G3953 Fragaria x ananassa HOM05D003630 ORTHO05D004151 4.2e-25 118.2 120 56.7
FAN16G2355 Fragaria x ananassa HOM05D003630 ORTHO05D004151 4.2e-25 118.2 120 60.0
FAN25G0655 Fragaria x ananassa HOM05D003630 ORTHO05D004151 4.2e-25 118.2 120 60.0
A03p18920 Brassica napus HOM05D003630 ORTHO05D004151 5.5e-25 117.9 121 52.1
FAN21G0750 Fragaria x ananassa HOM05D003630 ORTHO05D004151 5.5e-25 117.9 120 56.7
Aqoxy1G02347 Aquilegia oxysepala HOM05D003630 ORTHO05D004151 7.2e-25 117.5 123 52.8
BcaB01g03917 Brassica carinata HOM05D003630 ORTHO05D004151 9.3e-25 117.1 119 52.9
BcaC01g05821 Brassica carinata HOM05D003630 ORTHO05D004151 9.3e-25 117.1 119 52.9
BcaC01g05822 Brassica carinata HOM05D003630 ORTHO05D004151 9.3e-25 117.1 119 52.9
BraA03t11151Z Brassica rapa HOM05D003630 ORTHO05D004151 9.3e-25 117.1 119 52.9
CiPaw.04G030300 Carya illinoinensis HOM05D003630 ORTHO05D004151 9.3e-25 117.1 111 61.3
MELO3C007269.2 Cucumis melo HOM05D003630 ORTHO05D004151 9.3e-25 117.1 112 63.4
Thhalv10017461m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 9.3e-25 117.1 119 56.3
CDE05G2086 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 1.6e-24 116.3 120 55.0
AL1G41920 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 2.1e-24 115.9 121 54.5
CARHR027820 Cardamine hirsuta HOM05D003630 ORTHO05D004151 2.1e-24 115.9 121 52.1
AT1G28330 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 2.7e-24 115.5 113 58.4
Lsat_1_v5_gn_1_124360 Lactuca sativa HOM05D003630 ORTHO05D004151 3.5e-24 115.2 101 60.4
Os11g0671000 Oryza sativa ssp. japonica HOM05D003630 ORTHO05D004151 3.5e-24 115.2 128 55.5
Rhsim02G0132700 Rhododendron simsii HOM05D003630 ORTHO05D004151 3.5e-24 115.2 115 58.3
CSS0037340 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 1.0e-23 113.6 111 62.2
Ciclev10017162m.g Citrus clementina HOM05D003630 ORTHO05D004151 1.0e-23 113.6 110 58.2
PSO541G4117 Papaver somniferum HOM05D003630 ORTHO05D004151 1.0e-23 113.6 131 58.0
Aa31sc652G110 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.3e-23 113.2 120 55.0
Aa31sc652G20 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.3e-23 113.2 120 55.0
Sp1g24570 Schrenkiella parvula HOM05D003630 ORTHO05D004151 1.3e-23 113.2 110 58.2
A09p37730 Brassica napus HOM05D003630 ORTHO05D004151 2.3e-23 112.5 119 54.6
C05p27220 Brassica napus HOM05D003630 ORTHO05D004151 2.3e-23 112.5 119 54.6
BraA09t39285Z Brassica rapa HOM05D003630 ORTHO05D004151 2.3e-23 112.5 119 54.6
Potri.004G047100 Populus trichocarpa HOM05D003630 ORTHO05D004151 3.0e-23 112.1 115 60.0
THA.LOC104814224 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 3.0e-23 112.1 112 57.1
HPP92_014190 Vanilla planifolia HOM05D003630 ORTHO05D004151 3.9e-23 111.7 122 49.2
CARHR127940 Cardamine hirsuta HOM05D003630 ORTHO05D004151 5.1e-23 111.3 117 51.3
Cfa000510 Carpinus fangiana HOM05D003630 ORTHO05D004151 5.1e-23 111.3 112 61.6
Psat1g203680 Pisum sativum HOM05D003630 ORTHO05D004151 1.9e-22 109.4 105 60.0
Haze_06402 Corylus avellana HOM05D003630 ORTHO05D004151 2.5e-22 109.0 115 60.9
BraA02t07868Z Brassica rapa HOM05D003630 ORTHO05D004151 3.3e-22 108.6 126 47.6
C02p44910 Brassica napus HOM05D003630 ORTHO05D004151 4.3e-22 108.2 126 47.6
BolC2t10526H Brassica oleracea HOM05D003630 ORTHO05D004151 4.3e-22 108.2 126 47.6
Gorai.009G167500 Gossypium raimondii HOM05D003630 ORTHO05D004151 5.7e-22 107.8 102 55.9
Duzib235G1039 Durio zibethinus HOM05D003630 ORTHO05D004151 7.4e-22 107.5 111 57.7
BolC5t31435H Brassica oleracea HOM05D003630 ORTHO05D004151 9.7e-22 107.1 119 52.1
SEGI_31386 Sequoiadendron giganteum HOM05D003630 ORTHO05D004151 1.6e-21 106.3 139 50.4
A02p28330 Brassica napus HOM05D003630 ORTHO05D004151 2.2e-21 105.9 126 48.4
Gorai.010G155600 Gossypium raimondii HOM05D003630 ORTHO05D004151 2.2e-21 105.9 110 58.2
DCAR_008021 Daucus carota HOM05D003630 ORTHO05D004151 2.8e-21 105.5 124 54.0
Sed0007569 Sechium edule HOM05D003630 ORTHO05D004151 2.8e-21 105.5 104 52.9
Aa31sc86G60 Aethionema arabicum HOM05D003630 ORTHO05D004151 3.7e-21 105.1 110 50.9
Thhalv10003427m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 3.7e-21 105.1 121 47.1
Sopen03g002370 Solanum pennellii HOM05D003630 ORTHO05D004151 3.7e-21 105.1 123 56.1
Sp2g09130 Schrenkiella parvula HOM05D003630 ORTHO05D004151 1.4e-20 103.2 125 46.4
AT5G44300 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 4.1e-20 101.7 122 45.1
Carub.0008s0422 Capsella rubella HOM05D003630 ORTHO05D004151 4.1e-20 101.7 120 44.2
Aa31LG9G8870 Aethionema arabicum HOM05D003630 ORTHO05D004151 6.9e-20 100.9 120 44.2
PSO675G3190 Papaver somniferum HOM05D003630 ORTHO05D004151 9.0e-20 100.5 128 53.1
AL8G15690 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 1.2e-19 100.1 122 44.3
CARHR178890 Cardamine hirsuta HOM05D003630 ORTHO05D004151 1.2e-19 100.1 123 50.4
Sabra04G0029500 Salix brachista HOM05D003630 ORTHO05D004151 1.5e-19 99.8 113 55.8
C03p22060 Brassica napus HOM05D003630 ORTHO05D004151 2.0e-19 99.4 104 50.0
Sc24g0001020 Simmondsia chinensis HOM05D003630 ORTHO05D004151 1.7e-18 96.3 110 46.4
ECA248G1596 Erigeron canadensis HOM05D000885 ORTHO05D008875 1.4e-17 93.2 85 62.4
BcaC03g16649 Brassica carinata HOM05D003630 ORTHO05D004151 2.7e-16 89.0 114 44.7
CAN.G529.26 Capsicum annuum HOM05D003630 ORTHO05D004151 5.1e-15 84.7 70 61.4
MD14G1054500 Malus domestica HOM05D003630 ORTHO05D004151 8.8e-15 84.0 98 46.9
Mapoly0057s0054 Marchantia polymorpha HOM05D003630 ORTHO05D004151 2.5e-14 82.4 141 37.6
Sc17g0006070 Simmondsia chinensis HOM05D003630 ORTHO05D004151 4.8e-13 78.2 112 46.4
Pp3c15_6160 Physcomitrium patens HOM05D003630 ORTHO05D004151 3.1e-12 75.5 150 34.0
AagrBONN_evm.TU.Sc2ySwM_228.5600 Anthoceros agrestis HOM05D003630 ORTHO05D004151 9.1e-12 73.9 152 34.9
BcaB07g30534 Brassica carinata HOM05D003630 ORTHO05D004151 1.5e-11 73.2 110 41.8
SMO367G0919 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 1.5e-11 73.2 120 42.5
SMO343G0126 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 3.4e-11 72.0 159 35.2
Aa31LG9G7730 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.4e-07 60.1 88 40.9
AagrBONN_evm.TU.Sc2ySwM_362.1976 Anthoceros agrestis HOM05D003630 ORTHO05D004151 3.9e-07 58.5 62 46.8
COL.COLO4_29750 Corchorus olitorius HOM05D003630 ORTHO05D004151 8.8e-07 57.4 43 60.5
Actinidia26134 Actinidia chinensis HOM05D003630 ORTHO05D004151 1.1e-06 57.0 39 61.5
Eucgr.E03257 Eucalyptus grandis HOM05D003630 ORTHO05D004151 3.3e-06 55.5 41 63.4
Pp3c10_24000 Physcomitrium patens HOM05D003630 ORTHO05D004151 7.4e-06 54.3 157 28.7


User provided reference genes

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