Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G4612 Erigeron canadensis HOM05D004068 ORTHO05D004700 1.5e-124 449.5 219 100.0
HanXRQChr16g0512461 Helianthus annuus HOM05D004068 ORTHO05D004700 1.3e-83 313.5 229 72.5
MD09G1287000 Malus domestica HOM05D004068 ORTHO05D004700 3.6e-75 285.4 156 82.7
Manes.05G011200 Manihot esculenta HOM05D004068 ORTHO05D004700 9.0e-74 280.8 208 68.8
Prupe.3G006200 Prunus persica HOM05D004068 ORTHO05D004700 4.5e-73 278.5 151 82.8
MSTRG.18070 Avicennia marina HOM05D004068 ORTHO05D004700 1.3e-72 276.9 190 70.0
Lsat_1_v5_gn_8_167400 Lactuca sativa HOM05D004068 ORTHO05D004700 1.3e-72 276.9 143 90.9
SalBow6G1478 Salvia bowleyana HOM05D004068 ORTHO05D004700 1.7e-72 276.6 169 76.9
Actinidia21362 Actinidia chinensis HOM05D004068 ORTHO05D004700 8.4e-72 274.2 186 70.4
COL.COLO4_23168 Corchorus olitorius HOM05D004068 ORTHO05D004700 8.4e-72 274.2 217 65.0
Actinidia06383 Actinidia chinensis HOM05D004068 ORTHO05D004700 1.1e-71 273.9 151 81.5
RcHm_v2.0_Chr3g0486891 Rosa chinensis HOM05D004068 ORTHO05D004700 1.1e-71 273.9 151 82.1
Nitab4.5_0004218g0050 Nicotiana tabacum HOM05D004068 ORTHO05D004700 3.2e-71 272.3 185 68.6
HanXRQChr06g0168031 Helianthus annuus HOM05D004068 ORTHO05D004700 7.1e-71 271.2 223 62.3
Solyc01g068020.4 Solanum lycopersicum HOM05D004068 ORTHO05D004700 1.6e-70 270.0 152 77.6
Sopen01g029940 Solanum pennellii HOM05D004068 ORTHO05D004700 1.6e-70 270.0 152 77.6
GSVIVG01028194001 Vitis vinifera HOM05D004068 ORTHO05D004700 2.1e-70 269.6 189 68.8
SGA_v2.0_scaffold417G51268 Striga asiatica HOM05D004068 ORTHO05D004700 3.5e-70 268.9 180 70.0
Lalb_Chr06g0167051 Lupinus albus HOM05D004068 ORTHO05D004700 4.6e-70 268.5 226 61.9
FAN23G3049 Fragaria x ananassa HOM05D004068 ORTHO05D004700 7.9e-70 267.7 151 80.8
PGR083G2849 Punica granatum HOM05D004068 ORTHO05D004700 7.9e-70 267.7 164 75.6
Glyma.10G009700 Glycine max HOM05D004068 ORTHO05D004700 1.0e-69 267.3 147 82.3
Cfa004871 Carpinus fangiana HOM05D004068 ORTHO05D004700 1.8e-69 266.5 166 71.7
Ciclev10022090m.g Citrus clementina HOM05D004068 ORTHO05D004700 1.8e-69 266.5 170 73.5
Nitab4.5_0000222g0260 Nicotiana tabacum HOM05D004068 ORTHO05D004700 3.0e-69 265.8 151 78.1
PSO357G0073 Papaver somniferum HOM05D004068 ORTHO05D004700 3.0e-69 265.8 155 78.1
Rhsim13G0001400 Rhododendron simsii HOM05D004068 ORTHO05D004700 3.9e-69 265.4 160 75.6
CAN.G100.22 Capsicum annuum HOM05D004068 ORTHO05D004700 5.1e-69 265.0 235 59.1
Migut.D00035 Erythranthe guttata HOM05D004068 ORTHO05D004700 5.1e-69 265.0 222 62.2
Peaxi162Scf00919g00026 Petunia axillaris HOM05D004068 ORTHO05D004700 5.1e-69 265.0 224 60.3
PSO170G5617 Papaver somniferum HOM05D004068 ORTHO05D004700 6.7e-69 264.6 149 79.2
Duzib138G0863 Durio zibethinus HOM05D004068 ORTHO05D004700 1.5e-68 263.5 178 72.5
Gorai.007G119900 Gossypium raimondii HOM05D004068 ORTHO05D004700 1.5e-68 263.5 216 63.4
EL10As5g23587 Beta vulgaris HOM05D004068 ORTHO05D004700 1.9e-68 263.1 169 74.0
CSS0008406 Camellia sinensis var. sinensis HOM05D004068 ORTHO05D004700 2.5e-68 262.7 150 76.7
Thecc.01G321500 Theobroma cacao HOM05D004068 ORTHO05D004700 2.5e-68 262.7 146 80.8
Sopen01g029950 Solanum pennellii HOM05D004068 ORTHO05D004700 3.3e-68 262.3 151 77.5
Nn3g21863 Nelumbo nucifera HOM05D004068 ORTHO05D004700 5.6e-68 261.5 147 81.0
Solyc01g068030.3 Solanum lycopersicum HOM05D004068 ORTHO05D004700 5.6e-68 261.5 221 61.1
CANSAT54G1466 Cannabis sativa HOM05D004068 ORTHO05D004700 7.4e-68 261.2 212 62.3
Glyma.02G009000 Glycine max HOM05D004068 ORTHO05D004700 7.4e-68 261.2 216 62.0
Eucgr.H00894 Eucalyptus grandis HOM05D004068 ORTHO05D004700 1.3e-67 260.4 178 70.2
Gohir.D11G111800 Gossypium hirsutum HOM05D004068 ORTHO05D004700 2.8e-67 259.2 145 80.7
Cc01_g21940 Coffea canephora HOM05D004068 ORTHO05D004700 3.7e-67 258.8 154 77.3
TWI14G0788 Tripterygium wilfordii HOM05D004068 ORTHO05D004700 4.8e-67 258.5 219 62.1
FAN28G2449 Fragaria x ananassa HOM05D004068 ORTHO05D004700 1.4e-66 256.9 173 70.5
CsaV3_7G030310 Cucumis sativus L. HOM05D004068 ORTHO05D004700 1.8e-66 256.5 164 71.3
Medtr1g086340 Medicago truncatula HOM05D004068 ORTHO05D004700 1.8e-66 256.5 151 78.1
MELO3C023625.2 Cucumis melo HOM05D004068 ORTHO05D004700 2.4e-66 256.1 168 70.2
unitig_90.g27445 Utricularia gibba HOM05D004068 ORTHO05D004700 2.4e-66 256.1 150 77.3
PGR083G1259 Punica granatum HOM05D004068 ORTHO05D004700 4.0e-66 255.4 161 73.3
PGSC0003DMG400005200 Solanum tuberosum HOM05D004068 ORTHO05D004700 4.0e-66 255.4 221 59.7
CiPaw.07G122600 Carya illinoinensis HOM05D004068 ORTHO05D004700 6.9e-66 254.6 176 65.3
AUR62024574 Chenopodium quinoa HOM05D004068 ORTHO05D004700 2.6e-65 252.7 167 71.3
CARHR001800 Cardamine hirsuta HOM05D004068 ORTHO05D004700 1.3e-64 250.4 205 59.5
C05p01270 Brassica napus HOM05D004068 ORTHO05D004700 2.9e-64 249.2 196 63.8
AL1G11820 Arabidopsis lyrata HOM05D004068 ORTHO05D004700 8.4e-64 247.7 206 58.7
A10p01270 Brassica napus HOM05D004068 ORTHO05D004700 1.1e-63 247.3 221 57.0
Gohir.A07G130200 Gossypium hirsutum HOM05D004068 ORTHO05D004700 1.1e-63 247.3 197 61.4
Gorai.001G146300 Gossypium raimondii HOM05D004068 ORTHO05D004700 1.9e-63 246.5 196 61.2
Sp1g01550 Schrenkiella parvula HOM05D004068 ORTHO05D004700 1.9e-63 246.5 213 57.3
Carub.0001s0155 Capsella rubella HOM05D004068 ORTHO05D004700 2.5e-63 246.1 200 59.5
Thhalv10008722m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 4.2e-63 245.4 222 55.4
FAN26G1054 Fragaria x ananassa HOM05D004068 ORTHO05D004700 4.2e-63 245.4 204 59.8
Zm00001eb131060 Zea mays HOM05D004068 ORTHO05D004700 4.2e-63 245.4 157 70.1
Gohir.D07G134600 Gossypium hirsutum HOM05D004068 ORTHO05D004700 5.5e-63 245.0 196 60.7
AT1G02475 Arabidopsis thaliana HOM05D004068 ORTHO05D004700 7.1e-63 244.6 147 73.5
Sed0027961 Sechium edule HOM05D004068 ORTHO05D004700 7.1e-63 244.6 149 73.8
Sed0019105 Sechium edule HOM05D004068 ORTHO05D004700 1.2e-62 243.8 149 73.2
Potri.014G115400 Populus trichocarpa HOM05D004068 ORTHO05D004700 2.1e-62 243.0 150 74.0
THA.LOC104801318 Tarenaya hassleriana HOM05D004068 ORTHO05D004700 3.5e-62 242.3 168 67.9
Potri.002G190300 Populus trichocarpa HOM05D004068 ORTHO05D004700 1.3e-61 240.4 223 57.0
TAR633G0425 Trochodendron aralioides HOM05D004068 ORTHO05D004700 1.3e-61 240.4 147 73.5
Aqoxy2G02578 Aquilegia oxysepala HOM05D004068 ORTHO05D004700 3.0e-61 239.2 142 74.6
HPP92_010032 Vanilla planifolia HOM05D004068 ORTHO05D004700 3.0e-61 239.2 224 56.2
FAN19G0978 Fragaria x ananassa HOM05D004068 ORTHO05D004700 3.9e-61 238.8 205 59.0
Hma1.2p1_0484F.1_g162840 Hydrangea macrophylla HOM05D004068 ORTHO05D004700 3.9e-61 238.8 159 70.4
Atru.chr5.916 Acer truncatum HOM05D004068 ORTHO05D004700 5.1e-61 238.4 151 75.5
BcaB03g15774 Brassica carinata HOM05D004068 ORTHO05D004700 2.5e-60 236.1 148 70.9
Aa31LG1G10110 Aethionema arabicum HOM05D004068 ORTHO05D004700 6.3e-59 231.5 220 52.7
FvH4_1g26710 Fragaria vesca HOM05D004068 ORTHO05D004700 6.3e-59 231.5 132 79.5
CAN.G100.23 Capsicum annuum HOM05D004068 ORTHO05D004700 1.4e-58 230.3 139 72.7
Lj1A11T70 Lonicera japonica HOM05D004068 ORTHO05D004700 6.9e-58 228.0 181 63.0
QL12p034273 Quercus lobata HOM05D004068 ORTHO05D004700 6.9e-58 228.0 192 62.0
TAR636G1362 Trochodendron aralioides HOM05D004068 ORTHO05D004700 6.9e-58 228.0 203 61.6
BraA10t42405Z Brassica rapa HOM05D004068 ORTHO05D004700 2.0e-57 226.5 222 53.6
Haze_05111 Corylus avellana HOM05D004068 ORTHO05D004700 4.5e-57 225.3 139 71.9
AUR62011741 Chenopodium quinoa HOM05D004068 ORTHO05D004700 1.7e-56 223.4 204 56.9
BcaB01g02105 Brassica carinata HOM05D004068 ORTHO05D004700 5.0e-56 221.9 208 55.3
Carub.0006s3535 Capsella rubella HOM05D004068 ORTHO05D004700 6.5e-56 221.5 149 67.1
Sp6g01730 Schrenkiella parvula HOM05D004068 ORTHO05D004700 1.4e-55 220.3 149 66.4
SEGI_19128 Sequoiadendron giganteum HOM05D004068 ORTHO05D004700 1.4e-55 220.3 157 62.4
AT4G01883 Arabidopsis thaliana HOM05D004068 ORTHO05D004700 2.5e-55 219.5 149 65.8
Hund09678 Selenicereus undatus HOM05D004068 ORTHO05D004700 2.5e-55 219.5 131 74.8
BcaC04g24068 Brassica carinata HOM05D004068 ORTHO05D004700 1.6e-54 216.9 218 51.4
Thhalv10028926m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 6.1e-54 214.9 146 67.1
Thhalv10028927m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 6.1e-54 214.9 146 67.1
BolC5t28909H Brassica oleracea HOM05D004068 ORTHO05D004700 1.0e-53 214.2 185 60.5
ATR0693G403 Amborella trichopoda HOM05D004068 ORTHO05D004700 1.8e-53 213.4 188 57.4
C09p01400 Brassica napus HOM05D004068 ORTHO05D004700 1.8e-53 213.4 220 51.4
AL6G51410 Arabidopsis lyrata HOM05D004068 ORTHO05D004700 3.9e-53 212.2 152 63.8
THA.LOC104801319 Tarenaya hassleriana HOM05D004068 ORTHO05D004700 5.1e-53 211.8 149 64.4
BolC9t53073H Brassica oleracea HOM05D004068 ORTHO05D004700 8.7e-53 211.1 226 50.0
MBI19_g32706_MAGBIO Magnolia biondii HOM05D004068 ORTHO05D004700 1.5e-52 210.3 168 60.7
CiPaw.08G084800 Carya illinoinensis HOM05D004068 ORTHO05D004700 3.3e-52 209.1 107 83.2
Sc17g0000200 Simmondsia chinensis HOM05D004068 ORTHO05D004700 7.4e-52 208.0 108 80.6
CDE02G2955 Ceratophyllum demersum HOM05D000037 ORTHO05D001684 8.2e-51 204.5 184 56.5
Duzib211G0484 Durio zibethinus HOM05D004068 ORTHO05D004700 1.1e-50 204.1 108 81.5
BcaC07g42396 Brassica carinata HOM05D004068 ORTHO05D004700 2.4e-50 203.0 137 67.2
Sabra14G0085500 Salix brachista HOM05D004068 ORTHO05D004700 1.2e-49 200.7 247 45.7
Mapoly0066s0015 Marchantia polymorpha HOM05D004068 ORTHO05D004700 4.5e-49 198.7 163 55.2
Carub.0001s0154 Capsella rubella HOM05D004068 ORTHO05D004700 1.0e-48 197.6 196 47.4
Cpa.g.sc67.88 Carica papaya HOM05D004068 ORTHO05D004700 1.0e-48 197.6 107 79.4
AagrBONN_evm.TU.Sc2ySwM_228.3301 Anthoceros agrestis HOM05D004068 ORTHO05D004700 1.3e-48 197.2 150 60.0
AT1G02470 Arabidopsis thaliana HOM05D004068 ORTHO05D004700 6.5e-48 194.9 156 54.5
Thhalv10008621m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 6.5e-48 194.9 172 50.0
AL1G11810 Arabidopsis lyrata HOM05D004068 ORTHO05D004700 1.4e-47 193.7 156 54.5
Sp1g01540 Schrenkiella parvula HOM05D004068 ORTHO05D004700 2.1e-46 189.9 172 48.8
A10p01260 Brassica napus HOM05D004068 ORTHO05D004700 1.4e-45 187.2 172 47.7
BcaC07g42395 Brassica carinata HOM05D004068 ORTHO05D004700 3.9e-45 185.7 172 47.7
A09p68650 Brassica napus HOM05D004068 ORTHO05D004700 3.9e-45 185.7 145 53.8
BolC8t52840H Brassica oleracea HOM05D004068 ORTHO05D004700 3.9e-45 185.7 172 47.7
BraA09t42208Z Brassica rapa HOM05D004068 ORTHO05D004700 3.9e-45 185.7 145 53.8
HPP92_015252 Vanilla planifolia HOM05D004068 ORTHO05D004700 5.1e-45 185.3 109 77.1
BraA10t42404Z Brassica rapa HOM05D004068 ORTHO05D004700 6.7e-45 184.9 172 47.1
CARHR001790 Cardamine hirsuta HOM05D004068 ORTHO05D004700 6.7e-45 184.9 211 43.6
C05p01260 Brassica napus HOM05D004068 ORTHO05D004700 8.8e-45 184.5 172 47.1
THA.LOC104801317 Tarenaya hassleriana HOM05D004068 ORTHO05D004700 1.1e-44 184.1 211 45.5
Pp3c26_7940 Physcomitrium patens HOM05D004068 ORTHO05D004700 5.7e-44 181.8 143 55.2
MD17G1279300 Malus domestica HOM05D004068 ORTHO05D004700 2.8e-43 179.5 168 55.4
VMungo0720G2238 Vigna mungo HOM05D004068 ORTHO05D004700 3.7e-43 179.1 204 49.5
CSS0047755 Camellia sinensis var. sinensis HOM05D004068 ORTHO05D004700 1.8e-42 176.8 117 67.5
Aa31LG1G10100 Aethionema arabicum HOM05D004068 ORTHO05D004700 4.1e-42 175.6 221 41.6
SMO134G0067 Selaginella moellendorffii HOM05D004068 ORTHO05D004700 4.1e-42 175.6 134 58.2
DCAR_018255 Daucus carota HOM05D004068 ORTHO05D004700 1.5e-41 173.7 157 56.7
CSS0031477 Camellia sinensis var. sinensis HOM05D004068 ORTHO05D004700 2.0e-41 173.3 117 65.8
Gohir.A11G106800 Gossypium hirsutum HOM05D004068 ORTHO05D004700 2.0e-41 173.3 160 57.5
Sabra02G0165200 Salix brachista HOM05D004068 ORTHO05D004700 4.5e-41 172.2 219 44.7
Pp3c9_13510 Physcomitrium patens HOM05D004068 ORTHO05D004700 2.9e-40 169.5 150 47.3
ClCG09G004770 Citrullus lanatus HOM05D004068 ORTHO05D004700 2.5e-39 166.4 161 54.0
C08p53250 Brassica napus HOM05D004068 ORTHO05D004700 9.4e-39 164.5 148 48.0
CBR_g29411 Chara braunii HOM05D004068 ORTHO05D004700 2.0e-36 156.8 119 55.5
CARHR249850 Cardamine hirsuta HOM05D004068 ORTHO05D004700 5.7e-36 155.2 90 71.1
Cre14.g616250 Chlamydomonas reinhardtii HOM05D004068 ORTHO05D004700 4.5e-33 145.6 147 44.9
arahy.Tifrunner.gnm1.ann1.20WW32 Arachis hypogaea HOM05D004068 ORTHO05D004700 3.8e-32 142.5 224 43.3
Phvul.007G211200 Phaseolus vulgaris HOM05D004068 ORTHO05D004700 6.5e-32 141.7 99 67.7
Psat6g159440 Pisum sativum HOM05D004068 ORTHO05D004700 2.5e-31 139.8 110 60.0
Dinv12104 Davidia involucrata HOM05D004068 ORTHO05D004700 2.1e-30 136.7 105 59.0
Lj5g0018153 Lotus japonicus HOM05D004068 ORTHO05D004700 8.0e-30 134.8 82 70.7
arahy.Tifrunner.gnm1.ann1.G5UTBZ Arachis hypogaea HOM05D004068 ORTHO05D004700 1.4e-29 134.0 219 42.9
Ah.02g112620 Amaranthus hybridus HOM05D004068 ORTHO05D004700 1.8e-29 133.7 146 50.0
MCO03G258 Micromonas commoda HOM05D004068 ORTHO05D004700 2.3e-29 133.3 141 40.4
Ca_10252_v3 Cicer arietinum L. HOM05D004068 ORTHO05D004700 7.5e-28 128.3 159 44.0
BraA09t35801Z Brassica rapa HOM05D004068 ORTHO05D004700 1.8e-26 123.6 143 45.5
TPR.G3089 Trifolium pratense HOM05D004068 ORTHO05D004700 7.0e-26 121.7 68 75.0
Aa31LG5G1470 Aethionema arabicum HOM05D004068 ORTHO05D004700 4.5e-25 119.0 213 39.0
vmacro09333 Vaccinium macrocarpon HOM05D004068 ORTHO05D004700 7.7e-25 118.2 65 78.5
PRCOL_00002997 Prasinoderma coloniale HOM05D004068 ORTHO05D004700 1.3e-24 117.5 140 38.6
TPR.G3034 Trifolium pratense HOM05D004068 ORTHO05D004700 1.6e-17 94.0 57 78.9
CAN.G257.121 Capsicum annuum HOM05D004068 ORTHO05D004700 2.7e-17 93.2 140 42.1
Glyma.19G225300 Glycine max HOM05D004068 ORTHO05D004700 3.0e-13 79.7 85 47.1
BcaC03g18203 Brassica carinata HOM05D004068 ORTHO05D004700 4.4e-12 75.9 114 38.6
Os01g0328600 Oryza sativa ssp. japonica HOM05D004068 ORTHO05D004700 4.4e-12 75.9 51 58.8
A02p42700 Brassica napus HOM05D004068 ORTHO05D004700 5.7e-12 75.5 112 40.2
Oeu052569.2 Olea europaea HOM05D004068 ORTHO05D004700 5.7e-12 75.5 59 57.6
C02p62690 Brassica napus HOM05D004068 ORTHO05D004700 1.8e-10 70.5 113 39.8
A09p01340 Brassica napus HOM05D004068 ORTHO05D004700 3.1e-10 69.7 113 36.3
Oeu044746.1 Olea europaea HOM05D004068 ORTHO05D004700 5.4e-10 68.9 75 50.7
BolC8t52839H Brassica oleracea HOM05D004068 ORTHO05D004700 1.9e-07 60.5 94 39.4
CSS0034791 Camellia sinensis var. sinensis HOM05D004068 ORTHO05D004700 2.5e-07 60.1 62 53.2
CSS0043421 Camellia sinensis var. sinensis HOM05D004068 ORTHO05D004700 2.5e-07 60.1 62 53.2


User provided reference genes

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