Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G4373 Erigeron canadensis HOM05D007654 ORTHO05D009697 2.9e-38 161.4 80 100.0
HanXRQChr11g0350121 Helianthus annuus HOM05D007654 ORTHO05D009697 1.1e-29 132.9 76 86.8
Lsat_1_v5_gn_8_54301 Lactuca sativa HOM05D007654 ORTHO05D009697 1.1e-29 132.9 76 82.9
Lsat_1_v5_gn_9_47321 Lactuca sativa HOM05D007654 ORTHO05D009697 7.2e-29 130.2 76 81.6
Hma1.2p1_0209F.1_g088920 Hydrangea macrophylla HOM05D007654 ORTHO05D009697 6.3e-25 117.1 77 72.7
CSS0025949 Camellia sinensis var. sinensis HOM05D007654 ORTHO05D009697 5.3e-24 114.0 74 71.6
MD11G1300800 Malus domestica HOM05D007654 ORTHO05D009697 5.3e-24 114.0 71 74.6
Prupe.8G254700 Prunus persica HOM05D007654 ORTHO05D009697 6.9e-24 113.6 70 75.7
Phvul.001G203700 Phaseolus vulgaris HOM05D007654 ORTHO05D009697 4.5e-23 110.9 72 70.8
PGR119G1851 Punica granatum HOM05D007654 ORTHO05D009697 7.7e-23 110.2 73 74.0
Nn3g21360 Nelumbo nucifera HOM05D007654 ORTHO05D009697 1.0e-22 109.8 78 67.9
Cfa005999 Carpinus fangiana HOM05D007654 ORTHO05D009697 1.7e-22 109.0 75 66.7
Dinv33011 Davidia involucrata HOM05D007654 ORTHO05D009697 1.7e-22 109.0 74 70.3
Migut.D00166 Erythranthe guttata HOM05D007654 ORTHO05D009697 1.7e-22 109.0 71 73.2
Eucgr.H01198 Eucalyptus grandis HOM05D007654 ORTHO05D009697 1.7e-22 109.0 74 67.6
Gohir.A12G009300 Gossypium hirsutum HOM05D007654 ORTHO05D009697 2.9e-22 108.2 74 66.2
Atru.chr5.1253 Acer truncatum HOM05D007654 ORTHO05D009697 3.8e-22 107.8 74 67.6
Manes.05G066600 Manihot esculenta HOM05D007654 ORTHO05D009697 3.8e-22 107.8 73 67.1
SalBow3G4040 Salvia bowleyana HOM05D007654 ORTHO05D009697 3.8e-22 107.8 71 71.8
COL.COLO4_08007 Corchorus olitorius HOM05D000091 ORTHO05D003679 5.0e-22 107.5 74 67.6
QL12p024465 Quercus lobata HOM05D007654 ORTHO05D009697 5.0e-22 107.5 74 68.9
PGSC0003DMG400011382 Solanum tuberosum HOM05D007654 ORTHO05D009697 5.0e-22 107.5 74 68.9
Gohir.D12G009200 Gossypium hirsutum HOM05D007654 ORTHO05D009697 6.5e-22 107.1 74 66.2
Gorai.008G009300 Gossypium raimondii HOM05D007654 ORTHO05D009697 6.5e-22 107.1 74 66.2
MD03G1278400 Malus domestica HOM05D007654 ORTHO05D009697 8.5e-22 106.7 68 72.1
Manes.01G215200 Manihot esculenta HOM05D007654 ORTHO05D009697 8.5e-22 106.7 72 70.8
Aqoxy2G03067 Aquilegia oxysepala HOM05D007654 ORTHO05D009697 1.1e-21 106.3 75 64.0
Ciclev10023123m.g Citrus clementina HOM05D007654 ORTHO05D009697 1.1e-21 106.3 80 66.2
Lj1g0000519 Lotus japonicus HOM05D007654 ORTHO05D009697 1.1e-21 106.3 72 70.8
Nitab4.5_0002006g0110 Nicotiana tabacum HOM05D007654 ORTHO05D009697 1.1e-21 106.3 81 65.4
TWI59G0903 Tripterygium wilfordii HOM05D007654 ORTHO05D009697 1.1e-21 106.3 74 70.3
GSVIVG01010984001 Vitis vinifera HOM05D007654 ORTHO05D009697 1.9e-21 105.5 74 67.6
Glyma.19G207800 Glycine max HOM05D007654 ORTHO05D009697 2.5e-21 105.1 71 67.6
Duzib138G0105 Durio zibethinus HOM05D007654 ORTHO05D009697 3.2e-21 104.8 74 62.2
FAN15G1923 Fragaria x ananassa HOM05D000091 ORTHO05D003679 3.2e-21 104.8 70 70.0
Glyma.03G210600 Glycine max HOM05D007654 ORTHO05D009697 4.2e-21 104.4 71 69.0
Solyc09g074620.3 Solanum lycopersicum HOM05D007654 ORTHO05D009697 4.2e-21 104.4 74 67.6
Sopen09g029490 Solanum pennellii HOM05D007654 ORTHO05D009697 4.2e-21 104.4 74 67.6
CANSAT25G3801 Cannabis sativa HOM05D007654 ORTHO05D009697 5.5e-21 104.0 77 63.6
CiPaw.07G102300 Carya illinoinensis HOM05D007654 ORTHO05D009697 5.5e-21 104.0 82 61.0
FAN27G0435 Fragaria x ananassa HOM05D000091 ORTHO05D003679 7.2e-21 103.6 70 70.0
vmacro14977 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 7.2e-21 103.6 68 70.6
RcHm_v2.0_Chr6g0292931 Rosa chinensis HOM05D007654 ORTHO05D009697 9.4e-21 103.2 70 70.0
TPR.G9273 Trifolium pratense HOM05D007654 ORTHO05D009697 1.2e-20 102.8 71 70.4
PSO170G3373 Papaver somniferum HOM05D007654 ORTHO05D009697 1.6e-20 102.4 77 61.0
Thecc.01G292900 Theobroma cacao HOM05D007654 ORTHO05D009697 1.6e-20 102.4 73 63.0
Cc01_g20410 Coffea canephora HOM05D007654 ORTHO05D009697 2.7e-20 101.7 74 63.5
arahy.Tifrunner.gnm1.ann1.4942C7 Arachis hypogaea HOM05D007654 ORTHO05D009697 4.7e-20 100.9 71 67.6
CsaV3_7G028850 Cucumis sativus L. HOM05D007654 ORTHO05D009697 6.1e-20 100.5 65 67.7
FAN24G2398 Fragaria x ananassa HOM05D000091 ORTHO05D003679 6.1e-20 100.5 70 68.6
Lalb_Chr15g0078691 Lupinus albus HOM05D007654 ORTHO05D009697 7.9e-20 100.1 68 70.6
Carub.0005s2957 Capsella rubella HOM05D007654 ORTHO05D009697 1.4e-19 99.4 78 60.3
Aa31LG10G16730 Aethionema arabicum HOM05D007654 ORTHO05D009697 1.8e-19 99.0 78 60.3
Medtr7g108290 Medicago truncatula HOM05D000091 ORTHO05D003679 1.8e-19 99.0 72 66.7
MELO3C016052.2 Cucumis melo HOM05D007654 ORTHO05D009697 2.3e-19 98.6 65 66.2
Potri.014G133600 Populus trichocarpa HOM05D007654 ORTHO05D009697 3.0e-19 98.2 71 66.2
Ca_09124_v3 Cicer arietinum L. HOM05D000091 ORTHO05D003679 5.1e-19 97.4 69 69.6
Oeu057570.1 Olea europaea HOM05D007654 ORTHO05D009697 6.7e-19 97.1 63 69.8
Thhalv10006348m.g Eutrema salsugineum HOM05D007654 ORTHO05D009697 8.8e-19 96.7 78 57.7
Haze_04848 Corylus avellana HOM05D007654 ORTHO05D009697 1.5e-18 95.9 104 50.0
AL5G45700 Arabidopsis lyrata HOM05D007654 ORTHO05D009697 2.0e-18 95.5 78 57.7
ClCG09G006300 Citrullus lanatus HOM05D007654 ORTHO05D009697 2.0e-18 95.5 65 63.1
Rhsim01G0281900 Rhododendron simsii HOM05D007654 ORTHO05D009697 2.0e-18 95.5 75 64.0
Sed0025850 Sechium edule HOM05D007654 ORTHO05D009697 3.3e-18 94.7 65 66.2
AT3G62920 Arabidopsis thaliana HOM05D007654 ORTHO05D009697 1.3e-17 92.8 78 56.4
CARHR173210 Cardamine hirsuta HOM05D007654 ORTHO05D009697 1.3e-17 92.8 78 55.1
unitig_0.g650 Utricularia gibba HOM05D007654 ORTHO05D009697 1.7e-17 92.4 68 66.2
Cpa.g.sc9.182 Carica papaya HOM05D007654 ORTHO05D009697 2.2e-17 92.0 82 62.2
TAR636G0595 Trochodendron aralioides HOM05D007654 ORTHO05D009697 2.8e-17 91.7 74 55.4
AUR62034665 Chenopodium quinoa HOM05D007654 ORTHO05D009697 4.8e-17 90.9 78 55.1
C08p37630 Brassica napus HOM05D007654 ORTHO05D009697 8.2e-17 90.1 75 54.7
BraA09t40886Z Brassica rapa HOM05D007654 ORTHO05D009697 8.2e-17 90.1 75 54.7
arahy.Tifrunner.gnm1.ann1.3EGQ08 Arachis hypogaea HOM05D007654 ORTHO05D009697 1.1e-16 89.7 61 68.9
Hund18071 Selenicereus undatus HOM05D007654 ORTHO05D009697 1.1e-16 89.7 68 61.8
FvH4_2g24970 Fragaria vesca HOM05D007654 ORTHO05D009697 1.8e-16 89.0 61 68.9
Actinidia21074 Actinidia chinensis HOM05D007654 ORTHO05D009697 3.1e-16 88.2 53 77.4
A09p54770 Brassica napus HOM05D007654 ORTHO05D009697 3.1e-16 88.2 75 53.3
BolC8t51346H Brassica oleracea HOM05D007654 ORTHO05D009697 5.3e-16 87.4 79 50.6
Nitab4.5_0001102g0070 Nicotiana tabacum HOM05D007654 ORTHO05D009697 5.3e-16 87.4 73 63.0
Lsat_1_v5_gn_0_9401 Lactuca sativa HOM05D007654 ORTHO05D009697 7.0e-16 87.0 58 70.7
BcaB02g08089 Brassica carinata HOM05D007654 ORTHO05D009697 9.1e-16 86.7 79 51.9
MBI18_g01968_MAGBIO Magnolia biondii HOM05D007654 ORTHO05D009697 9.1e-16 86.7 76 55.3
Eucgr.L03487 Eucalyptus grandis HOM05D007654 ORTHO05D009697 1.2e-15 86.3 75 57.3
Dinv19737 Davidia involucrata HOM05D007654 ORTHO05D009697 2.0e-15 85.5 49 79.6
Actinidia21070 Actinidia chinensis HOM05D007654 ORTHO05D009697 2.2e-14 82.0 49 81.6
C04p30320 Brassica napus HOM05D007654 ORTHO05D009697 2.2e-14 82.0 68 52.9
BolC4t24565H Brassica oleracea HOM05D007654 ORTHO05D009697 2.2e-14 82.0 68 52.9
EL10Ac7g17424 Beta vulgaris HOM05D007654 ORTHO05D009697 2.9e-14 81.6 74 54.1
arahy.Tifrunner.gnm1.ann1.559R1C Arachis hypogaea HOM05D007654 ORTHO05D009697 8.5e-14 80.1 49 75.5
A04p00450 Brassica napus HOM05D007654 ORTHO05D009697 8.5e-14 80.1 65 55.4
BraA04t15764Z Brassica rapa HOM05D007654 ORTHO05D009697 8.5e-14 80.1 65 55.4
FAN20G1580 Fragaria x ananassa HOM05D007654 ORTHO05D009697 8.5e-14 80.1 62 64.5
Sabra14G0099700 Salix brachista HOM05D000091 ORTHO05D003679 8.5e-14 80.1 62 64.5
Zm00001eb365450 Zea mays HOM05D007654 ORTHO05D009697 1.9e-13 79.0 57 64.9
vmacro14982 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 3.6e-12 74.7 48 72.9
AUR62008575 Chenopodium quinoa HOM05D000096 ORTHO05D000045 8.0e-12 73.6 59 59.3
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 8.0e-12 73.6 59 57.6
Os05g0371500 Oryza sativa ssp. japonica HOM05D007654 ORTHO05D009697 4.0e-11 71.2 51 60.8
SEGI_14019 Sequoiadendron giganteum HOM05D007654 ORTHO05D009697 5.3e-08 60.8 46 54.3
Mapoly0101s0010 Marchantia polymorpha HOM05D007654 ORTHO05D009697 2.7e-07 58.5 53 54.7
AagrBONN_evm.TU.Sc2ySwM_344.4968 Anthoceros agrestis HOM05D007654 ORTHO05D009697 5.0e-06 54.3 47 46.8


User provided reference genes

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