Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 4.9e-126 454.5 235 100.0
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 9.0e-96 354.0 220 80.5
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 6.7e-83 311.2 236 68.6
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 4.3e-82 308.5 236 68.2
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 5.6e-82 308.1 235 66.8
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 4.0e-80 302.0 234 65.8
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 4.0e-80 302.0 234 64.5
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 1.5e-79 300.1 235 65.5
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 2.6e-79 299.3 234 65.0
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 5.8e-79 298.1 234 64.1
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 2.2e-78 296.2 225 65.3
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 1.4e-77 293.5 233 65.2
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 3.2e-77 292.4 236 63.6
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 3.2e-77 292.4 234 63.2
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 9.3e-77 290.8 223 65.9
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 9.3e-77 290.8 253 60.5
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 1.6e-76 290.0 235 63.8
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 2.1e-76 289.7 236 64.0
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 2.1e-76 289.7 231 65.4
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 2.7e-76 289.3 236 62.7
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 7.9e-76 287.7 236 64.0
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 7.9e-76 287.7 237 61.6
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 1.0e-75 287.3 236 62.7
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 1.3e-75 287.0 236 64.0
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 2.3e-75 286.2 235 59.6
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 8.7e-75 284.3 234 62.0
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.9e-74 283.1 234 62.0
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 2.5e-74 282.7 236 61.0
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 2.5e-74 282.7 209 67.5
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 2.5e-74 282.7 235 62.6
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 3.3e-74 282.3 235 62.6
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 3.3e-74 282.3 236 61.9
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 5.7e-74 281.6 237 62.9
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 5.7e-74 281.6 233 61.4
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 9.6e-74 280.8 234 60.7
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 9.6e-74 280.8 215 67.0
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 9.6e-74 280.8 234 62.0
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 9.6e-74 280.8 230 63.5
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 1.6e-73 280.0 236 60.6
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 2.1e-73 279.6 234 61.1
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 2.8e-73 279.3 221 63.8
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 2.8e-73 279.3 234 61.5
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 2.8e-73 279.3 227 65.2
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 6.3e-73 278.1 226 66.8
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 1.1e-72 277.3 231 61.9
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 1.8e-72 276.6 229 62.0
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 1.8e-72 276.6 233 58.8
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 2.4e-72 276.2 237 59.9
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 4.1e-72 275.4 234 62.4
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 1.2e-71 273.9 233 59.7
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 1.5e-71 273.5 234 61.5
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 4.5e-71 271.9 240 59.2
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 5.9e-71 271.6 229 59.4
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 5.9e-71 271.6 229 63.3
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 5.9e-71 271.6 229 59.0
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 7.6e-71 271.2 233 61.4
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 1.3e-70 270.4 224 61.2
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 1.7e-70 270.0 233 58.4
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 2.9e-70 269.2 229 59.4
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 2.9e-70 269.2 229 59.8
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 2.9e-70 269.2 229 59.8
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 2.9e-70 269.2 224 60.3
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 2.9e-70 269.2 233 61.4
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 3.8e-70 268.9 229 59.4
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 5.0e-70 268.5 234 59.8
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 6.5e-70 268.1 236 57.6
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 6.5e-70 268.1 230 58.3
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 1.4e-69 266.9 223 59.6
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 1.4e-69 266.9 232 59.1
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 1.9e-69 266.5 237 57.8
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 1.9e-69 266.5 228 59.6
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 3.2e-69 265.8 221 60.2
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 4.2e-69 265.4 229 57.6
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 7.2e-69 264.6 210 61.4
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 2.1e-68 263.1 225 59.1
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 4.6e-68 261.9 237 56.5
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 6.1e-68 261.5 228 60.1
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 7.9e-68 261.2 224 58.9
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 1.8e-67 260.0 218 60.1
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 3.0e-67 259.2 230 57.8
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 3.9e-67 258.8 157 83.4
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 1.5e-66 256.9 237 57.0
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 1.9e-66 256.5 229 57.6
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 1.9e-66 256.5 220 59.5
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 2.5e-66 256.1 236 55.9
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 7.4e-66 254.6 225 57.3
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 3.7e-65 252.3 232 57.8
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 3.7e-65 252.3 213 62.0
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 8.2e-65 251.1 229 56.3
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 2.4e-64 249.6 235 55.7
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 5.3e-64 248.4 206 61.7
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 4.5e-63 245.4 224 58.9
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 2.9e-62 242.7 218 56.4
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 4.3e-58 228.8 261 49.8
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 1.5e-55 220.3 199 58.8
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 1.1e-53 214.2 180 58.3
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 9.7e-50 201.1 151 65.6
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 1.1e-48 197.6 232 47.0
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 1.1e-45 187.6 158 61.4
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 5.9e-39 165.2 108 76.9
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 6.5e-38 161.8 146 57.5
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 4.7e-36 155.6 207 41.1
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 4.7e-36 155.6 193 41.5
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 2.0e-34 150.2 139 54.0
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 6.3e-33 145.2 236 39.4
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 1.2e-31 141.0 220 36.8
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 8.5e-30 134.8 216 33.8
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 2.5e-29 133.3 117 56.4
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 1.6e-28 130.6 215 32.6
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 2.7e-28 129.8 101 63.4
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 6.1e-28 128.6 201 36.8
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 4.3e-21 105.9 69 76.8
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 4.3e-21 105.9 69 76.8
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 7.3e-21 105.1 164 39.6
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 7.3e-21 105.1 72 66.7
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 1.7e-17 94.0 229 27.1


User provided reference genes

Program Settings