Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G4186 Erigeron canadensis HOM05D007316 ORTHO05D009393 1.5e-33 145.6 71 100.0
HanXRQChr07g0193721 Helianthus annuus HOM05D007316 ORTHO05D009393 4.4e-22 107.5 66 81.8
Lsat_1_v5_gn_9_84180 Lactuca sativa HOM05D007316 ORTHO05D009393 1.0e-18 96.3 66 69.7
QL09p015786 Quercus lobata HOM05D007316 ORTHO05D009393 1.6e-16 89.0 61 70.5
QL09p023249 Quercus lobata HOM05D007316 ORTHO05D009393 1.6e-16 89.0 61 70.5
QL02p030600 Quercus lobata HOM05D007316 ORTHO05D009393 8.1e-16 86.7 61 68.9
Hma1.2p1_0157F.1_g069460 Hydrangea macrophylla HOM05D007316 ORTHO05D009393 3.1e-15 84.7 61 65.6
Sopen08g002530 Solanum pennellii HOM05D007316 ORTHO05D009393 5.2e-15 84.0 58 69.0
Cc02_g36870 Coffea canephora HOM05D007316 ORTHO05D009393 8.9e-15 83.2 60 66.7
PGSC0003DMG400026307 Solanum tuberosum HOM05D007316 ORTHO05D009393 8.9e-15 83.2 58 67.2
RcHm_v2.0_Chr4g0387841 Rosa chinensis HOM05D007316 ORTHO05D009393 2.0e-14 82.0 61 65.6
arahy.Tifrunner.gnm1.ann1.AE1MMP Arachis hypogaea HOM05D007316 ORTHO05D009393 2.6e-14 81.6 60 63.3
arahy.Tifrunner.gnm1.ann1.CUXT1U Arachis hypogaea HOM05D007316 ORTHO05D009393 2.6e-14 81.6 60 63.3
Eucgr.H00565 Eucalyptus grandis HOM05D007316 ORTHO05D009393 2.6e-14 81.6 61 62.3
Manes.17G057300 Manihot esculenta HOM05D007316 ORTHO05D009393 2.6e-14 81.6 60 65.0
GSVIVG01029768001 Vitis vinifera HOM05D007316 ORTHO05D009393 2.6e-14 81.6 60 63.3
CSS0014503 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 3.4e-14 81.3 61 60.7
CSS0021979 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 3.4e-14 81.3 61 60.7
FvH4_4g00490 Fragaria vesca HOM05D007316 ORTHO05D009393 4.4e-14 80.9 61 65.6
FAN12G3999 Fragaria x ananassa HOM05D007316 ORTHO05D009393 4.4e-14 80.9 61 65.6
FAN17G1024 Fragaria x ananassa HOM05D007316 ORTHO05D009393 4.4e-14 80.9 61 65.6
FAN22G1131 Fragaria x ananassa HOM05D007316 ORTHO05D009393 4.4e-14 80.9 61 65.6
Ca_09261_v3 Cicer arietinum L. HOM05D007316 ORTHO05D009393 5.8e-14 80.5 60 65.0
RcHm_v2.0_Chr4g0387941 Rosa chinensis HOM05D007316 ORTHO05D009393 5.8e-14 80.5 61 63.9
Sed0015703 Sechium edule HOM05D007316 ORTHO05D009393 7.5e-14 80.1 60 65.0
CSS0015421 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 9.9e-14 79.7 64 59.4
Medtr7g111090 Medicago truncatula HOM05D007316 ORTHO05D009393 9.9e-14 79.7 60 65.0
Thecc.05G261200 Theobroma cacao HOM05D007316 ORTHO05D009393 9.9e-14 79.7 61 60.7
Cpa.g.sc233.10 Carica papaya HOM05D007316 ORTHO05D009393 1.3e-13 79.3 59 64.4
ClCG09G016900 Citrullus lanatus HOM05D007316 ORTHO05D009393 1.3e-13 79.3 60 65.0
Gohir.D13G105800 Gossypium hirsutum HOM05D007316 ORTHO05D009393 1.3e-13 79.3 61 60.7
Peaxi162Scf00071g00128 Petunia axillaris HOM05D007316 ORTHO05D009393 1.3e-13 79.3 59 61.0
RcHm_v2.0_Chr4g0385941 Rosa chinensis HOM05D007316 ORTHO05D009393 1.3e-13 79.3 61 63.9
THA.LOC104813939 Tarenaya hassleriana HOM05D007316 ORTHO05D009393 1.3e-13 79.3 61 62.3
Duzib106G1284 Durio zibethinus HOM05D007316 ORTHO05D009393 2.2e-13 78.6 61 59.0
CANSAT56G2903 Cannabis sativa HOM05D007316 ORTHO05D009393 2.9e-13 78.2 60 65.0
Psat3g015560 Pisum sativum HOM05D007316 ORTHO05D009393 2.9e-13 78.2 60 60.0
Duzib128G0483 Durio zibethinus HOM05D007316 ORTHO05D009393 3.7e-13 77.8 61 59.0
MELO3C021892.2 Cucumis melo HOM05D007316 ORTHO05D009393 4.9e-13 77.4 60 63.3
Phvul.001G220400 Phaseolus vulgaris HOM05D007316 ORTHO05D009393 4.9e-13 77.4 60 61.7
CsaV3_2G036390 Cucumis sativus L. HOM05D007316 ORTHO05D009393 6.4e-13 77.0 60 63.3
PGR119G2118 Punica granatum HOM05D007316 ORTHO05D009393 6.4e-13 77.0 59 61.0
Potri.011G067800 Populus trichocarpa HOM05D007316 ORTHO05D009393 8.3e-13 76.6 60 58.3
Aa31LG4G3460 Aethionema arabicum HOM05D007316 ORTHO05D009393 1.1e-12 76.3 61 57.4
A07p29930 Brassica napus HOM05D007316 ORTHO05D009393 1.1e-12 76.3 61 59.0
C06p34200 Brassica napus HOM05D007316 ORTHO05D009393 1.1e-12 76.3 61 59.0
BolC6t38541H Brassica oleracea HOM05D007316 ORTHO05D009393 1.1e-12 76.3 61 59.0
BraA07t30632Z Brassica rapa HOM05D007316 ORTHO05D009393 1.1e-12 76.3 61 59.0
Ciclev10023234m.g Citrus clementina HOM05D007316 ORTHO05D009393 1.1e-12 76.3 61 60.7
SalBow3G1440 Salvia bowleyana HOM05D007316 ORTHO05D009393 1.1e-12 76.3 60 61.7
TWI23G0494 Tripterygium wilfordii HOM05D007316 ORTHO05D009393 1.1e-12 76.3 61 57.4
Aqoxy7G02856 Aquilegia oxysepala HOM05D007316 ORTHO05D009393 1.9e-12 75.5 61 57.4
Potri.004G058400 Populus trichocarpa HOM05D007316 ORTHO05D009393 1.9e-12 75.5 60 58.3
Atru.chr12.1494 Acer truncatum HOM05D007316 ORTHO05D009393 2.4e-12 75.1 60 61.7
Lalb_Chr04g0260251 Lupinus albus HOM05D007316 ORTHO05D009393 2.4e-12 75.1 62 61.3
CSS0022236 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 3.2e-12 74.7 64 57.8
Glyma.03G226500 Glycine max HOM05D007316 ORTHO05D009393 4.1e-12 74.3 60 60.0
Glyma.19G223500 Glycine max HOM05D007316 ORTHO05D009393 4.1e-12 74.3 60 60.0
Lj1g0006735 Lotus japonicus HOM05D007316 ORTHO05D009393 4.1e-12 74.3 60 60.0
Sp5g28140 Schrenkiella parvula HOM05D007316 ORTHO05D009393 7.1e-12 73.6 61 55.7
Cfa016046 Carpinus fangiana HOM05D007316 ORTHO05D009393 9.2e-12 73.2 61 57.4
AL2G32940 Arabidopsis lyrata HOM05D007316 ORTHO05D009393 3.5e-11 71.2 61 55.7
COL.COLO4_20544 Corchorus olitorius HOM05D007316 ORTHO05D009393 3.5e-11 71.2 63 52.4
Migut.B00683 Erythranthe guttata HOM05D007316 ORTHO05D009393 6.0e-11 70.5 59 54.2
Migut.B00911 Erythranthe guttata HOM05D007316 ORTHO05D009393 6.0e-11 70.5 59 54.2
AT1G73177 Arabidopsis thaliana HOM05D007316 ORTHO05D009393 7.8e-11 70.1 61 54.1
Carub.0002s1996 Capsella rubella HOM05D007316 ORTHO05D009393 1.0e-10 69.7 61 54.1
Prupe.3G122600 Prunus persica HOM05D007316 ORTHO05D009393 1.7e-10 68.9 61 54.1
CARHR066170 Cardamine hirsuta HOM05D007316 ORTHO05D009393 2.3e-10 68.6 61 54.1
MD09G1239400 Malus domestica HOM05D007316 ORTHO05D009393 2.5e-09 65.1 59 52.5
BcaC08g45665 Brassica carinata HOM05D007316 ORTHO05D009393 4.3e-09 64.3 76 46.1
Os07g0633800 Oryza sativa ssp. japonica HOM05D007316 ORTHO05D009393 4.7e-08 60.8 61 47.5
Thhalv10019421m.g Eutrema salsugineum HOM05D007316 ORTHO05D009393 3.1e-07 58.2 58 48.3
TAR362G0014 Trochodendron aralioides HOM05D007316 ORTHO05D009393 3.1e-07 58.2 40 62.5
EL10Ac8g18312 Beta vulgaris HOM05D007316 ORTHO05D009393 4.0e-07 57.8 47 55.3
Nn7g37509 Nelumbo nucifera HOM05D007316 ORTHO05D009393 4.0e-07 57.8 41 58.5
CiPaw.05G216300 Carya illinoinensis HOM05D007316 ORTHO05D009393 2.6e-06 55.1 54 51.9
Gorai.013G118500 Gossypium raimondii HOM05D007316 ORTHO05D009393 3.4e-06 54.7 61 49.2
MBI18_g28941_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D004701 4.4e-06 54.3 40 52.5
Oeu034759.1 Olea europaea HOM05D007316 ORTHO05D009393 5.8e-06 53.9 40 60.0
vmacro19806 Vaccinium macrocarpon HOM05D007316 ORTHO05D009393 5.8e-06 53.9 40 57.5
GSVIVG01026029001 Vitis vinifera HOM05D007316 ORTHO05D009393 9.9e-06 53.1 40 55.0


User provided reference genes

Program Settings