Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G4104 Erigeron canadensis HOM05D003814 ORTHO05D004399 2.2e-210 735.3 356 100.0
HanXRQChr04g0107941 Helianthus annuus HOM05D003814 ORTHO05D004399 8.6e-66 255.0 343 47.5
Lsat_1_v5_gn_6_92600 Lactuca sativa HOM05D003814 ORTHO05D004399 3.0e-58 229.9 354 42.4
Lsat_1_v5_gn_8_86340 Lactuca sativa HOM05D003814 ORTHO05D004399 6.2e-56 222.2 353 39.9
Lsat_1_v5_gn_1_71940 Lactuca sativa HOM05D003814 ORTHO05D004399 1.1e-52 211.5 354 41.8
HanXRQChr11g0341161 Helianthus annuus HOM05D003814 ORTHO05D004399 3.2e-52 209.9 355 40.0
HanXRQChr04g0126041 Helianthus annuus HOM05D003814 ORTHO05D004399 4.1e-52 209.5 354 38.4
HanXRQChr04g0126191 Helianthus annuus HOM05D003814 ORTHO05D004399 6.6e-50 202.2 357 39.2
HanXRQChr04g0110661 Helianthus annuus HOM05D003814 ORTHO05D004399 2.9e-37 160.2 296 37.5
ECA236G4439 Erigeron canadensis HOM05D003814 ORTHO05D004399 1.5e-33 147.9 231 41.1
ECA246G3486 Erigeron canadensis HOM05D003814 ORTHO05D004399 3.3e-33 146.7 282 39.7
Hma1.2p1_0169F.1_g074710 Hydrangea macrophylla HOM05D003814 ORTHO05D004399 1.2e-30 138.3 362 32.0
Nitab4.5_0000073g0260 Nicotiana tabacum HOM05D003814 ORTHO05D004399 1.9e-28 131.0 365 32.6
QL05p073999 Quercus lobata HOM05D003814 ORTHO05D004399 1.9e-28 131.0 356 31.7
Dinv25578 Davidia involucrata HOM05D003814 ORTHO05D004399 3.2e-28 130.2 278 33.5
Haze_08071 Corylus avellana HOM05D003814 ORTHO05D004399 8.7e-26 122.1 272 29.8
Cc08_g07160 Coffea canephora HOM05D003814 ORTHO05D004399 1.9e-25 120.9 258 34.9
RcHm_v2.0_Chr2g0094241 Rosa chinensis HOM05D003814 ORTHO05D004399 3.3e-25 120.2 276 32.2
QL03p008482 Quercus lobata HOM05D003814 ORTHO05D004399 5.6e-25 119.4 190 37.9
CiPaw.01G298600 Carya illinoinensis HOM05D003814 ORTHO05D004399 4.8e-24 116.3 278 32.7
Potri.008G038000 Populus trichocarpa HOM05D003814 ORTHO05D004399 1.1e-23 115.2 277 31.8
Haze_11118 Corylus avellana HOM05D003814 ORTHO05D004399 1.4e-23 114.8 283 31.8
Potri.014G187100 Populus trichocarpa HOM05D003814 ORTHO05D004399 2.4e-23 114.0 269 30.9
Ciclev10007128m.g Citrus clementina HOM05D003814 ORTHO05D004399 5.3e-23 112.8 356 28.9
BraA09t37130Z Brassica rapa HOM05D003814 ORTHO05D004399 1.5e-22 111.3 367 29.2
Lsat_1_v5_gn_8_83741 Lactuca sativa HOM05D003814 ORTHO05D004399 2.6e-22 110.5 256 34.4
TWI53G0525 Tripterygium wilfordii HOM05D003814 ORTHO05D004399 3.4e-22 110.2 271 28.8
Lsat_1_v5_gn_8_99821 Lactuca sativa HOM05D002339 ORTHO05D004399 4.5e-22 109.8 264 33.7
MD15G1214200 Malus domestica HOM05D003814 ORTHO05D004399 7.6e-22 109.0 379 29.3
BcaC04g22552 Brassica carinata HOM05D003814 ORTHO05D004399 9.9e-22 108.6 288 30.6
BolC9t54693H Brassica oleracea HOM05D003814 ORTHO05D004399 9.9e-22 108.6 288 30.6
A09p14840 Brassica napus HOM05D003814 ORTHO05D004399 1.3e-21 108.2 366 29.2
DCAR_028786 Daucus carota HOM05D003814 ORTHO05D004399 1.3e-21 108.2 268 32.8
Thecc.06G118300 Theobroma cacao HOM05D003814 ORTHO05D004399 1.7e-21 107.8 269 31.2
Peaxi162Scf00928g00024 Petunia axillaris HOM05D003814 ORTHO05D004399 2.2e-21 107.5 284 32.7
C09p17970 Brassica napus HOM05D003814 ORTHO05D004399 4.9e-21 106.3 288 30.2
FvH4_1g08170 Fragaria vesca HOM05D003814 ORTHO05D004399 4.9e-21 106.3 277 33.6
FAN19G0873 Fragaria x ananassa HOM05D003814 ORTHO05D004399 4.9e-21 106.3 277 33.6
BcaB07g31449 Brassica carinata HOM05D003814 ORTHO05D004399 6.4e-21 105.9 371 28.8
Migut.E01439 Erythranthe guttata HOM05D003814 ORTHO05D004399 1.9e-20 104.4 391 29.9
Duzib168G0557 Durio zibethinus HOM05D003814 ORTHO05D004399 2.4e-20 104.0 297 30.3
AL2G10680 Arabidopsis lyrata HOM05D003814 ORTHO05D004399 4.2e-20 103.2 281 29.9
Potri.007G037500 Populus trichocarpa HOM05D003814 ORTHO05D004399 4.2e-20 103.2 272 29.4
Carub.0002s0052 Capsella rubella HOM05D003814 ORTHO05D004399 5.5e-20 102.8 358 29.3
Gorai.003G018500 Gossypium raimondii HOM05D003814 ORTHO05D004399 5.5e-20 102.8 324 26.2
Sp1g34730 Schrenkiella parvula HOM05D003814 ORTHO05D004399 5.5e-20 102.8 275 30.5
Gohir.D03G018133 Gossypium hirsutum HOM05D003814 ORTHO05D004399 7.1e-20 102.4 324 26.2
Sp1g34780 Schrenkiella parvula HOM05D003814 ORTHO05D004399 7.1e-20 102.4 275 30.2
Thecc.09G080800 Theobroma cacao HOM05D003814 ORTHO05D004399 7.1e-20 102.4 282 30.1
Potri.006G167500 Populus trichocarpa HOM05D003814 ORTHO05D004399 1.6e-19 101.3 269 29.4
FAN23G2856 Fragaria x ananassa HOM05D003814 ORTHO05D004399 2.1e-19 100.9 357 30.3
FAN26G3410 Fragaria x ananassa HOM05D003814 ORTHO05D004399 2.7e-19 100.5 276 33.3
FAN26G2103 Fragaria x ananassa HOM05D003814 ORTHO05D004399 3.5e-19 100.1 276 33.0
FAN28G0169 Fragaria x ananassa HOM05D003814 ORTHO05D004399 6.0e-19 99.4 270 33.3
Potri.001G462650 Populus trichocarpa HOM05D003814 ORTHO05D004399 6.0e-19 99.4 239 31.0
AT1G64295 Arabidopsis thaliana HOM05D003814 ORTHO05D004399 7.9e-19 99.0 357 26.9
Gohir.A02G162300 Gossypium hirsutum HOM05D003814 ORTHO05D004399 7.9e-19 99.0 324 25.3
Prupe.7G202800 Prunus persica HOM05D003814 ORTHO05D004399 7.9e-19 99.0 273 32.2
AL2G10650 Arabidopsis lyrata HOM05D003814 ORTHO05D004399 1.0e-18 98.6 357 27.2
Potri.017G066400 Populus trichocarpa HOM05D003814 ORTHO05D004399 1.0e-18 98.6 272 29.8
SGA_v2.0_scaffold4G02155 Striga asiatica HOM05D003814 ORTHO05D004399 1.0e-18 98.6 282 30.5
BcaB07g31514 Brassica carinata HOM05D003814 ORTHO05D004399 3.9e-18 96.7 358 28.8
CAN.G625.43 Capsicum annuum HOM05D003814 ORTHO05D004399 5.1e-18 96.3 382 27.5
Manes.04G143500 Manihot esculenta HOM05D003814 ORTHO05D004399 6.7e-18 95.9 277 30.3
Thhalv10028265m.g Eutrema salsugineum HOM05D003814 ORTHO05D004399 8.7e-18 95.5 285 28.1
Gohir.D04G023700 Gossypium hirsutum HOM05D003814 ORTHO05D004399 1.9e-17 94.4 327 27.5
PGSC0003DMG400037022 Solanum tuberosum HOM05D003814 ORTHO05D004399 1.9e-17 94.4 190 35.8
A04p14880 Brassica napus HOM05D003814 ORTHO05D004399 2.5e-17 94.0 289 28.0
BraA04t17126Z Brassica rapa HOM05D003814 ORTHO05D004399 2.5e-17 94.0 289 28.0
Nitab4.5_0000343g0080 Nicotiana tabacum HOM05D003814 ORTHO05D004399 2.5e-17 94.0 274 29.9
Prupe.7G202900 Prunus persica HOM05D003814 ORTHO05D004399 3.3e-17 93.6 360 26.7
CARHR290110 Cardamine hirsuta HOM05D003814 ORTHO05D004399 4.3e-17 93.2 290 28.6
Carub.0002s0053 Capsella rubella HOM05D003814 ORTHO05D004399 5.6e-17 92.8 285 29.1
PSO478G4598 Papaver somniferum HOM05D003814 ORTHO05D004399 1.3e-16 91.7 282 30.1
ClCG10G017950 Citrullus lanatus HOM05D003814 ORTHO05D004399 1.6e-16 91.3 298 29.9
Gohir.D04G029200 Gossypium hirsutum HOM05D003814 ORTHO05D004399 1.6e-16 91.3 328 27.1
TAR178G0001 Trochodendron aralioides HOM05D003814 ORTHO05D004399 1.6e-16 91.3 270 30.4
PGSC0003DMG400041501 Solanum tuberosum HOM05D003814 ORTHO05D004399 2.1e-16 90.9 286 31.1
Gorai.012G033100 Gossypium raimondii HOM05D003814 ORTHO05D004399 2.8e-16 90.5 327 26.9
TAR624G1373 Trochodendron aralioides HOM05D003814 ORTHO05D004399 3.7e-16 90.1 270 30.4
PGSC0003DMG400046351 Solanum tuberosum HOM05D003814 ORTHO05D004399 4.8e-16 89.7 201 32.8
CARHR272950 Cardamine hirsuta HOM05D003814 ORTHO05D004399 6.2e-16 89.4 280 28.2
FvH4_1g08161 Fragaria vesca HOM05D003814 ORTHO05D004399 6.2e-16 89.4 208 31.7
Sabra10G0173600 Salix brachista HOM05D001546 ORTHO05D004399 6.2e-16 89.4 281 28.5
PSO017G6459 Papaver somniferum HOM05D003814 ORTHO05D004399 1.4e-15 88.2 282 30.1
Sed0024854 Sechium edule HOM05D003814 ORTHO05D004399 1.8e-15 87.8 365 27.1
FAN26G3081 Fragaria x ananassa HOM05D003814 ORTHO05D004399 5.3e-15 86.3 186 32.8
Gohir.A05G386550 Gossypium hirsutum HOM05D003814 ORTHO05D004399 5.3e-15 86.3 322 26.7
ClCG10G017770 Citrullus lanatus HOM05D003814 ORTHO05D004399 6.9e-15 85.9 292 29.8
Haze_11116 Corylus avellana HOM05D003054 ORTHO05D003376 1.2e-14 85.1 270 28.1
MELO3C009576.2 Cucumis melo HOM05D003814 ORTHO05D004399 1.5e-14 84.7 368 28.0
SpUn1086_0010 Schrenkiella parvula HOM05D003814 ORTHO05D004399 2.6e-14 84.0 219 28.8
Gohir.D04G024036 Gossypium hirsutum HOM05D003814 ORTHO05D004399 3.4e-14 83.6 299 27.1
Migut.E01447 Erythranthe guttata HOM05D003814 ORTHO05D004399 7.6e-14 82.4 220 30.9
Carub.0007s3374 Capsella rubella HOM05D003814 ORTHO05D004399 1.0e-13 82.0 146 34.9
PGSC0003DMG400035508 Solanum tuberosum HOM05D003814 ORTHO05D004399 2.9e-13 80.5 137 38.0
FAN28G0704 Fragaria x ananassa HOM05D003814 ORTHO05D004399 6.5e-13 79.3 190 30.5
Peaxi162Scf00047g10141 Petunia axillaris HOM05D003814 ORTHO05D004399 6.5e-13 79.3 183 33.9
Peaxi162Scf00067g00233 Petunia axillaris HOM05D003814 ORTHO05D004399 3.2e-12 77.0 196 33.7
Carub.0007s3375 Capsella rubella HOM05D003814 ORTHO05D004399 4.2e-12 76.6 278 28.1
PGR004G1882 Punica granatum HOM05D003814 ORTHO05D004399 4.2e-12 76.6 260 28.1
Carub.0007s3376 Capsella rubella HOM05D003814 ORTHO05D004399 5.5e-12 76.3 260 29.2
BraA09t37073Z Brassica rapa HOM05D003814 ORTHO05D004399 9.3e-12 75.5 281 27.0
CiPaw.04G145600 Carya illinoinensis HOM05D003814 ORTHO05D004399 1.2e-11 75.1 158 35.4
unitig_22.g5418 Utricularia gibba HOM05D003814 ORTHO05D004399 1.2e-11 75.1 358 26.0
unitig_22.g5424 Utricularia gibba HOM05D003814 ORTHO05D004399 1.6e-11 74.7 283 29.7
CsaV3_3G038340 Cucumis sativus L. HOM05D003814 ORTHO05D004399 2.1e-11 74.3 298 29.5
FAN23G1165 Fragaria x ananassa HOM05D003814 ORTHO05D004399 2.7e-11 73.9 186 30.6
Thhalv10023822m.g Eutrema salsugineum HOM05D003814 ORTHO05D004399 4.6e-11 73.2 359 26.7
TAR626G0622 Trochodendron aralioides HOM05D003814 ORTHO05D004399 7.9e-11 72.4 268 28.0
Lsat_1_v5_gn_2_42360 Lactuca sativa HOM05D003814 ORTHO05D004399 1.3e-10 71.6 193 31.6
TAR374G0716 Trochodendron aralioides HOM05D003814 ORTHO05D004399 1.8e-10 71.2 268 28.0
Haze_11119 Corylus avellana HOM05D003814 ORTHO05D004399 3.9e-10 70.1 184 32.6
FAN19G3124 Fragaria x ananassa HOM05D003814 ORTHO05D004399 3.9e-10 70.1 185 29.7
PSO801G0304 Papaver somniferum HOM05D003814 ORTHO05D004399 3.9e-10 70.1 179 31.8
CARHR050300 Cardamine hirsuta HOM05D003814 ORTHO05D004399 5.1e-10 69.7 365 25.8
SHI03045 Sapria himalayana HOM05D003814 ORTHO05D004399 1.1e-09 68.6 274 26.6
SHI03051 Sapria himalayana HOM05D003814 ORTHO05D004399 1.1e-09 68.6 274 26.6
FAN26G2210 Fragaria x ananassa HOM05D003814 ORTHO05D004399 1.9e-09 67.8 102 39.2
PSO832G2394 Papaver somniferum HOM05D003814 ORTHO05D004399 4.3e-09 66.6 166 28.3
MD15G1214100 Malus domestica HOM05D003814 ORTHO05D004399 5.7e-09 66.2 153 35.3
C04p48950 Brassica napus HOM05D003814 ORTHO05D004399 2.1e-08 64.3 143 31.5
BolC4t26476H Brassica oleracea HOM05D003814 ORTHO05D004399 2.1e-08 64.3 143 31.5
TAR624G1176 Trochodendron aralioides HOM05D003814 ORTHO05D004399 2.8e-08 63.9 118 34.7
PSO210G1123 Papaver somniferum HOM05D003814 ORTHO05D004399 1.1e-07 62.0 171 28.1
Lsat_1_v5_gn_5_64781 Lactuca sativa HOM05D003814 ORTHO05D004399 3.1e-07 60.5 151 29.1
Lsat_1_v5_gn_8_2320 Lactuca sativa HOM05D003814 ORTHO05D004399 5.3e-07 59.7 121 36.4
Sp1g34880 Schrenkiella parvula HOM05D003814 ORTHO05D004399 1.5e-06 58.2 187 27.8
Sp7g03960 Schrenkiella parvula HOM05D003814 ORTHO05D004399 4.5e-06 56.6 256 23.8
Lsat_1_v5_gn_7_15380 Lactuca sativa HOM05D003814 ORTHO05D004399 7.6e-06 55.8 171 29.2
Peaxi162Scf00928g00006 Petunia axillaris HOM05D003814 ORTHO05D004399 7.6e-06 55.8 109 36.7


User provided reference genes

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