Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G4020 Erigeron canadensis HOM05D003969 ORTHO05D003125 1.6e-69 266.2 149 100.0
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 1.5e-35 153.3 140 59.3
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 5.6e-35 151.4 149 60.4
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 5.6e-19 98.2 138 45.7
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 7.3e-19 97.8 134 46.3
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.8e-17 93.2 137 42.3
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.8e-17 93.2 137 42.3
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 3.1e-17 92.4 139 41.7
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 6.9e-17 91.3 137 42.3
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 1.2e-16 90.5 133 41.4
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.2e-16 90.5 139 44.6
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.2e-16 90.5 139 44.6
MBI14_g03633_MAGBIO Magnolia biondii HOM05D003969 ORTHO05D003125 3.4e-16 89.0 133 40.6
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 3.4e-16 89.0 137 42.3
Cc06_g07430 Coffea canephora HOM05D003969 ORTHO05D003125 2.2e-15 86.3 130 40.0
Actinidia04245 Actinidia chinensis HOM05D003969 ORTHO05D003125 4.9e-15 85.1 129 50.4
SalBow1G8303 Salvia bowleyana HOM05D003969 ORTHO05D003125 6.4e-15 84.7 130 40.0
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 1.1e-14 84.0 145 42.1
Solyc07g007150.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 1.9e-14 83.2 130 42.3
HPP92_005341 Vanilla planifolia HOM05D003969 ORTHO05D003125 3.2e-14 82.4 131 39.7
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 4.2e-14 82.0 78 56.4
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 4.2e-14 82.0 82 53.7
Sopen07g003200 Solanum pennellii HOM05D003969 ORTHO05D003125 7.1e-14 81.3 128 42.2
Actinidia21911 Actinidia chinensis HOM05D003969 ORTHO05D003125 9.3e-14 80.9 132 38.6
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 2.7e-13 79.3 82 52.4
MSTRG.26029 Avicennia marina HOM05D003969 ORTHO05D003125 4.6e-13 78.6 82 53.7
Medtr4g116500 Medicago truncatula HOM05D003969 ORTHO05D003125 4.6e-13 78.6 135 39.3
PSO675G3576 Papaver somniferum HOM05D003969 ORTHO05D003125 4.6e-13 78.6 146 40.4
Lalb_Chr12g0198511 Lupinus albus HOM05D003969 ORTHO05D003125 6.0e-13 78.2 134 39.6
Peaxi162Scf00391g00017 Petunia axillaris HOM05D003969 ORTHO05D003125 7.9e-13 77.8 127 40.9
Rhsim03G0254600 Rhododendron simsii HOM05D000320 ORTHO05D000532 7.9e-13 77.8 124 41.9
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 1.0e-12 77.4 87 47.1
Glyma.17G105200 Glycine max HOM05D003969 ORTHO05D003125 1.8e-12 76.6 135 39.3
ClCG02G017250 Citrullus lanatus HOM05D003969 ORTHO05D003125 3.9e-12 75.5 137 45.3
Lj4g0023658 Lotus japonicus HOM05D003969 ORTHO05D003125 3.9e-12 75.5 135 38.5
PSO732G0403 Papaver somniferum HOM05D003969 ORTHO05D003125 5.1e-12 75.1 146 41.1
Psat4g033280 Pisum sativum HOM05D003969 ORTHO05D003125 5.1e-12 75.1 132 40.2
Rhsim02G0205800 Rhododendron simsii HOM05D003969 ORTHO05D003125 6.7e-12 74.7 122 36.9
TPR.G15776 Trifolium pratense HOM05D003969 ORTHO05D003125 6.7e-12 74.7 139 41.0
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.5e-11 73.6 142 38.7
Phvul.003G174600 Phaseolus vulgaris HOM05D003969 ORTHO05D003125 1.9e-11 73.2 133 36.8
MSTRG.10635 Avicennia marina HOM05D003969 ORTHO05D003125 2.5e-11 72.8 129 38.0
Glyma.13G157500 Glycine max HOM05D003969 ORTHO05D003125 3.3e-11 72.4 137 36.5
Oeu010893.1 Olea europaea HOM05D003969 ORTHO05D003125 3.3e-11 72.4 137 35.8
Sopen12g005450 Solanum pennellii HOM05D003969 ORTHO05D003125 3.3e-11 72.4 133 31.6
VMungo1215G0564 Vigna mungo HOM05D003969 ORTHO05D003125 3.3e-11 72.4 133 36.8
Cfa013102 Carpinus fangiana HOM05D003969 ORTHO05D003125 5.6e-11 71.6 72 56.9
Ca_21615_v3 Cicer arietinum L. HOM05D003969 ORTHO05D003125 5.6e-11 71.6 130 36.9
Migut.K00379 Erythranthe guttata HOM05D003969 ORTHO05D003125 5.6e-11 71.6 128 43.0
Lalb_Chr13g0301201 Lupinus albus HOM05D003969 ORTHO05D003125 5.6e-11 71.6 136 37.5
PGSC0003DMG400036991 Solanum tuberosum HOM05D003969 ORTHO05D003125 5.6e-11 71.6 133 33.1
Solyc12g010430.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 7.4e-11 71.2 147 35.4
PGSC0003DMG400030696 Solanum tuberosum HOM05D003969 ORTHO05D003125 7.4e-11 71.2 138 39.1
MELO3C016989.2 Cucumis melo HOM05D003969 ORTHO05D003125 9.6e-11 70.9 73 50.7
Cpa.g.sc187.25 Carica papaya HOM05D008824 ORTHO05D003125 1.6e-10 70.1 72 52.8
PGSC0003DMG400029901 Solanum tuberosum HOM05D003969 ORTHO05D003125 1.6e-10 70.1 135 34.8
CSS0019227 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 2.1e-10 69.7 130 36.2
CSS0049905 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 2.1e-10 69.7 130 36.2
Cpa.g.sc46.86 Carica papaya HOM05D003969 ORTHO05D003125 2.1e-10 69.7 140 45.0
TWI34G1911 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 2.1e-10 69.7 136 37.5
QL02p020337 Quercus lobata HOM05D008824 ORTHO05D003125 2.8e-10 69.3 81 49.4
RcHm_v2.0_Chr2g0086701 Rosa chinensis HOM05D003969 ORTHO05D003125 2.8e-10 69.3 154 32.5
AUR62031569 Chenopodium quinoa HOM05D003969 ORTHO05D003125 3.7e-10 68.9 139 33.1
Ah.10g035700 Amaranthus hybridus HOM05D003969 ORTHO05D003125 4.8e-10 68.6 126 35.7
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 4.8e-10 68.6 73 49.3
Haze_21463 Corylus avellana HOM05D008824 ORTHO05D003125 4.8e-10 68.6 72 55.6
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 6.2e-10 68.2 72 55.6
AUR62041449 Chenopodium quinoa HOM05D003969 ORTHO05D003125 6.2e-10 68.2 80 43.8
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 6.2e-10 68.2 79 46.8
Medtr1g012950 Medicago truncatula HOM05D013068 ORTHO05D003125 6.2e-10 68.2 150 34.7
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 6.2e-10 68.2 76 47.4
Sed0021780 Sechium edule HOM05D003969 ORTHO05D003125 6.2e-10 68.2 138 38.4
AUR62012444 Chenopodium quinoa HOM05D003969 ORTHO05D003125 1.4e-09 67.0 142 33.1
SGA_v2.0_scaffold500G52494 Striga asiatica HOM05D003969 ORTHO05D003125 1.4e-09 67.0 128 41.4
Gohir.A13G203200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.8e-09 66.6 85 49.4
Gorai.013G237600 Gossypium raimondii HOM05D003969 ORTHO05D003125 1.8e-09 66.6 85 49.4
CiPaw.15G182500 Carya illinoinensis HOM05D003969 ORTHO05D003125 4.0e-09 65.5 67 47.8
CDE02G3523 Ceratophyllum demersum HOM05D000894 ORTHO05D001833 4.0e-09 65.5 145 35.9
Solyc08g041810.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 4.0e-09 65.5 136 33.1
Glyma.14G112500 Glycine max HOM05D003969 ORTHO05D003125 5.3e-09 65.1 145 37.9
Gohir.D13G208500 Gossypium hirsutum HOM05D003969 ORTHO05D003125 5.3e-09 65.1 85 48.2
CiPaw.15G182600 Carya illinoinensis HOM05D003969 ORTHO05D003125 6.9e-09 64.7 67 47.8
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 6.9e-09 64.7 82 43.9
MSTRG.10639 Avicennia marina HOM05D003969 ORTHO05D003125 9.0e-09 64.3 126 35.7
Nitab4.5_0010572g0020 Nicotiana tabacum HOM05D003969 ORTHO05D003125 9.0e-09 64.3 82 42.7
Lalb_Chr22g0361461 Lupinus albus HOM05D013068 ORTHO05D003125 1.2e-08 63.9 150 34.0
Nitab4.5_0017863g0010 Nicotiana tabacum HOM05D003969 ORTHO05D003125 1.2e-08 63.9 128 37.5
Haze_19321 Corylus avellana HOM05D003969 ORTHO05D003125 1.5e-08 63.5 73 49.3
Duzib150G0809 Durio zibethinus HOM05D003969 ORTHO05D003125 1.5e-08 63.5 101 40.6
Duzib168G2018 Durio zibethinus HOM05D003969 ORTHO05D003125 1.5e-08 63.5 103 42.7
Gohir.A05G056900 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.5e-08 63.5 76 44.7
Lj5g0018030 Lotus japonicus HOM05D013068 ORTHO05D003125 1.5e-08 63.5 141 34.0
Cc08_g00220 Coffea canephora HOM05D003969 ORTHO05D003125 2.0e-08 63.2 129 34.1
FAN19G0689 Fragaria x ananassa HOM05D003969 ORTHO05D003125 2.0e-08 63.2 150 32.7
BcaB04g18063 Brassica carinata HOM05D003969 ORTHO05D003125 2.6e-08 62.8 144 34.7
Sopen08g011970 Solanum pennellii HOM05D003969 ORTHO05D003125 2.6e-08 62.8 86 41.9
AUR62011257 Chenopodium quinoa HOM05D003969 ORTHO05D003125 3.4e-08 62.4 81 42.0
MELO3C004442.2 Cucumis melo HOM05D003969 ORTHO05D003125 3.4e-08 62.4 89 46.1
Sed0014973 Sechium edule HOM05D003969 ORTHO05D003125 3.4e-08 62.4 81 42.0
Sc23g0006550 Simmondsia chinensis HOM05D003969 ORTHO05D003125 3.4e-08 62.4 136 33.8
Thecc.09G019700 Theobroma cacao HOM05D003969 ORTHO05D003125 3.4e-08 62.4 83 39.8
Aa31LG3G16070 Aethionema arabicum HOM05D008824 ORTHO05D003125 4.5e-08 62.0 100 38.0
Gohir.D05G059000 Gossypium hirsutum HOM05D003969 ORTHO05D003125 4.5e-08 62.0 81 39.5
Sed0009487 Sechium edule HOM05D003969 ORTHO05D003125 4.5e-08 62.0 62 53.2
FAN20G0523 Fragaria x ananassa HOM05D019695 ORTHO05D022679 5.8e-08 61.6 93 37.6
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 5.8e-08 61.6 133 34.6
HPP92_006060 Vanilla planifolia HOM05D003969 ORTHO05D003125 5.8e-08 61.6 126 34.1
Actinidia23308 Actinidia chinensis HOM05D003969 ORTHO05D003125 7.6e-08 61.2 66 54.5
Aqoxy7G03536 Aquilegia oxysepala HOM05D003969 ORTHO05D003125 7.6e-08 61.2 129 35.7
FvH4_2g28320 Fragaria vesca HOM05D019695 ORTHO05D022679 7.6e-08 61.2 93 37.6
FAN24G2106 Fragaria x ananassa HOM05D019695 ORTHO05D022679 7.6e-08 61.2 93 37.6
Gorai.009G060100 Gossypium raimondii HOM05D003969 ORTHO05D003125 7.6e-08 61.2 81 39.5
Nitab4.5_0000069g0040 Nicotiana tabacum HOM05D003969 ORTHO05D003125 7.6e-08 61.2 87 42.5
Ah.16g104800 Amaranthus hybridus HOM05D003969 ORTHO05D003125 9.9e-08 60.8 126 32.5
FAN15G0756 Fragaria x ananassa HOM05D019695 ORTHO05D022679 9.9e-08 60.8 84 41.7
Phvul.001G047400 Phaseolus vulgaris HOM05D013068 ORTHO05D003125 9.9e-08 60.8 137 34.3
Solyc01g011390.2 Solanum lycopersicum HOM05D003969 ORTHO05D003125 9.9e-08 60.8 72 50.0
THA.LOC104815009 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 9.9e-08 60.8 89 43.8
EL10Ac8g18819 Beta vulgaris HOM05D003969 ORTHO05D003125 1.3e-07 60.5 75 45.3
FAN26G0199 Fragaria x ananassa HOM05D003969 ORTHO05D003125 1.3e-07 60.5 145 32.4
SGA_v2.0_scaffold64G21997 Striga asiatica HOM05D003969 ORTHO05D003125 1.3e-07 60.5 82 47.6
TPR.G38870 Trifolium pratense HOM05D013068 ORTHO05D003125 1.3e-07 60.5 143 31.5
VMungo0647G1373 Vigna mungo HOM05D013068 ORTHO05D003125 1.3e-07 60.5 134 33.6
COL.COLO4_24105 Corchorus olitorius HOM05D003969 ORTHO05D003125 1.7e-07 60.1 107 37.4
FAN23G1308 Fragaria x ananassa HOM05D003969 ORTHO05D003125 1.7e-07 60.1 79 46.8
FAN28G0460 Fragaria x ananassa HOM05D003969 ORTHO05D003125 1.7e-07 60.1 150 32.0
CDE02G0310 Ceratophyllum demersum HOM05D003969 ORTHO05D003125 2.2e-07 59.7 81 42.0
COL.COLO4_18912 Corchorus olitorius HOM05D003969 ORTHO05D003125 2.2e-07 59.7 81 43.2
PGR031G2169 Punica granatum HOM05D003969 ORTHO05D003125 2.2e-07 59.7 80 40.0
Sc23g0006560 Simmondsia chinensis HOM05D003969 ORTHO05D003125 2.2e-07 59.7 127 33.9
Sc23g0006570 Simmondsia chinensis HOM05D003969 ORTHO05D003125 2.2e-07 59.7 71 49.3
PGSC0003DMG400005307 Solanum tuberosum HOM05D003969 ORTHO05D003125 2.2e-07 59.7 70 45.7
BcaC07g37678 Brassica carinata HOM05D003969 ORTHO05D003125 2.9e-07 59.3 139 33.1
BolC8t48050H Brassica oleracea HOM05D003969 ORTHO05D003125 2.9e-07 59.3 139 33.1
Carub.0007s3088 Capsella rubella HOM05D003969 ORTHO05D003125 2.9e-07 59.3 142 31.7
Manes.03G012100 Manihot esculenta HOM05D003969 ORTHO05D003125 2.9e-07 59.3 133 33.8
Peaxi162Scf00315g00011 Petunia axillaris HOM05D003969 ORTHO05D003125 2.9e-07 59.3 88 40.9
Atru.chr7.2498 Acer truncatum HOM05D003969 ORTHO05D003125 3.8e-07 58.9 79 49.4
Rhsim01G0050100 Rhododendron simsii HOM05D016725 ORTHO05D003125 3.8e-07 58.9 134 32.8
Rhsim01G0052800 Rhododendron simsii HOM05D016725 ORTHO05D003125 3.8e-07 58.9 134 35.1
Eucgr.C01699 Eucalyptus grandis HOM05D003969 ORTHO05D003125 4.9e-07 58.5 69 43.5
Thhalv10005689m.g Eutrema salsugineum HOM05D003969 ORTHO05D003125 4.9e-07 58.5 143 32.2
THA.LOC104814116 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 4.9e-07 58.5 86 44.2
AL7G43940 Arabidopsis lyrata HOM05D003969 ORTHO05D003125 6.4e-07 58.2 144 30.6
Eucgr.C01632 Eucalyptus grandis HOM05D003969 ORTHO05D003125 6.4e-07 58.2 69 43.5
Manes.16G125900 Manihot esculenta HOM05D008824 ORTHO05D003125 6.4e-07 58.2 72 45.8
CANSAT01G2013 Cannabis sativa HOM05D008824 ORTHO05D003125 8.4e-07 57.8 93 41.9
ATR0629G091 Amborella trichopoda HOM05D003969 ORTHO05D003125 1.1e-06 57.4 75 41.3
AT5G35090 Arabidopsis thaliana HOM05D003969 ORTHO05D003125 1.4e-06 57.0 142 29.6
EL10Ac2g04157 Beta vulgaris HOM05D003969 ORTHO05D003125 1.4e-06 57.0 77 44.2
BcaC03g13348 Brassica carinata HOM05D008824 ORTHO05D003125 1.9e-06 56.6 86 41.9
C02p04840 Brassica napus HOM05D008824 ORTHO05D003125 1.9e-06 56.6 86 41.9
FAN27G0582 Fragaria x ananassa HOM05D019695 ORTHO05D022679 1.9e-06 56.6 93 36.6
PGR142G4289 Punica granatum HOM05D003969 ORTHO05D003125 1.9e-06 56.6 141 34.8
Glyma.17G215400 Glycine max HOM05D013068 ORTHO05D003125 2.4e-06 56.2 134 34.3
Manes.14G138428 Manihot esculenta HOM05D003969 ORTHO05D003125 2.4e-06 56.2 97 42.3
CAN.G551.21 Capsicum annuum HOM05D003969 ORTHO05D003125 3.2e-06 55.8 135 31.1
Thhalv10016092m.g Eutrema salsugineum HOM05D008824 ORTHO05D003125 3.2e-06 55.8 98 36.7
ClCG08G013530 Citrullus lanatus HOM05D008824 ORTHO05D003125 4.2e-06 55.5 71 42.3
Eucgr.C01639 Eucalyptus grandis HOM05D003969 ORTHO05D003125 4.2e-06 55.5 71 42.3
Thecc.09G141500 Theobroma cacao HOM05D003969 ORTHO05D003125 4.2e-06 55.5 86 39.5
vmacro12402 Vaccinium macrocarpon HOM05D006851 ORTHO05D008844 4.2e-06 55.5 48 58.3
Aa31sc598G40 Aethionema arabicum HOM05D003969 ORTHO05D003125 5.5e-06 55.1 141 32.6
A08p09570 Brassica napus HOM05D003969 ORTHO05D003125 5.5e-06 55.1 68 47.1
BolC2t06442H Brassica oleracea HOM05D008824 ORTHO05D003125 5.5e-06 55.1 85 41.2
BraA08t32954Z Brassica rapa HOM05D003969 ORTHO05D003125 5.5e-06 55.1 68 47.1
Eucgr.C01690 Eucalyptus grandis HOM05D003969 ORTHO05D003125 5.5e-06 55.1 69 40.6
Gohir.A07G030200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 5.5e-06 55.1 60 50.0
Gohir.D07G034000 Gossypium hirsutum HOM05D003969 ORTHO05D003125 5.5e-06 55.1 60 50.0
Gorai.001G035600 Gossypium raimondii HOM05D003969 ORTHO05D003125 5.5e-06 55.1 60 50.0
Lalb_Chr24g0402081 Lupinus albus HOM05D013068 ORTHO05D003125 5.5e-06 55.1 88 44.3
Sopen01g007400 Solanum pennellii HOM05D003969 ORTHO05D003125 5.5e-06 55.1 74 44.6
CARHR217160 Cardamine hirsuta HOM05D003969 ORTHO05D003125 9.3e-06 54.3 140 30.7
Eucgr.C01701 Eucalyptus grandis HOM05D003969 ORTHO05D003125 9.3e-06 54.3 71 42.3
Potri.006G259200 Populus trichocarpa HOM05D008824 ORTHO05D003125 9.3e-06 54.3 143 32.2


User provided reference genes

Program Settings