Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G3926 Erigeron canadensis HOM05D008022 ORTHO05D010147 3.6e-49 198.4 135 100.0
Lsat_1_v5_gn_7_91921 Lactuca sativa HOM05D008022 ORTHO05D010147 1.6e-33 146.4 80 76.2
Eucgr.F01845 Eucalyptus grandis HOM05D008022 ORTHO05D010147 2.1e-20 102.8 79 58.2
Psat6g005360 Pisum sativum HOM05D008022 ORTHO05D010147 2.1e-20 102.8 81 58.0
Atru.chr13.362 Acer truncatum HOM05D008022 ORTHO05D010147 1.8e-19 99.8 78 55.1
TPR.G40293 Trifolium pratense HOM05D008022 ORTHO05D010147 3.0e-19 99.0 78 55.1
Medtr1g023270 Medicago truncatula HOM05D008022 ORTHO05D010147 3.9e-19 98.6 78 56.4
CiPaw.08G062600 Carya illinoinensis HOM05D008022 ORTHO05D010147 1.1e-18 97.1 79 54.4
MD15G1017600 Malus domestica HOM05D008022 ORTHO05D010147 1.9e-18 96.3 58 69.0
Phvul.001G009600 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 1.9e-18 96.3 78 53.8
CANSAT25G1466 Cannabis sativa HOM05D008022 ORTHO05D010147 3.3e-18 95.5 59 64.4
Lalb_Chr08g0246011 Lupinus albus HOM05D008022 ORTHO05D010147 3.3e-18 95.5 79 55.7
Lj1g0009874 Lotus japonicus HOM05D008022 ORTHO05D010147 4.3e-18 95.1 83 53.0
Nitab4.5_0000493g0010 Nicotiana tabacum HOM05D008022 ORTHO05D010147 5.6e-18 94.7 45 82.2
CsaV3_7G006070 Cucumis sativus L. HOM05D008022 ORTHO05D010147 7.4e-18 94.4 82 54.9
Potri.005G234601 Populus trichocarpa HOM05D008022 ORTHO05D010147 9.6e-18 94.0 44 81.8
Lj5g0000972 Lotus japonicus HOM05D008022 ORTHO05D010147 1.3e-17 93.6 76 57.9
Medtr3g113080 Medicago truncatula HOM05D008022 ORTHO05D010147 1.3e-17 93.6 83 51.8
Manes.05G152650 Manihot esculenta HOM05D008022 ORTHO05D010147 1.6e-17 93.2 54 72.2
CiPaw.07G154400 Carya illinoinensis HOM05D008022 ORTHO05D010147 2.8e-17 92.4 84 50.0
CSS0048901 Camellia sinensis var. sinensis HOM05D008022 ORTHO05D010147 3.6e-17 92.0 69 59.4
Sed0002960 Sechium edule HOM05D008022 ORTHO05D010147 4.8e-17 91.7 59 62.7
Cpa.g.sc140.17 Carica papaya HOM05D008022 ORTHO05D010147 6.2e-17 91.3 44 75.0
Cc10_g02120 Coffea canephora HOM05D008022 ORTHO05D010147 6.2e-17 91.3 45 80.0
Lalb_Chr22g0354471 Lupinus albus HOM05D008022 ORTHO05D010147 1.1e-16 90.5 76 56.6
EL10Ac1g00558 Beta vulgaris HOM05D008022 ORTHO05D010147 1.4e-16 90.1 48 75.0
PGR031G0261 Punica granatum HOM05D008022 ORTHO05D010147 2.4e-16 89.4 72 51.4
FvH4_2g39010 Fragaria vesca HOM05D008022 ORTHO05D010147 3.1e-16 89.0 56 60.7
arahy.Tifrunner.gnm1.ann1.QUSF5W Arachis hypogaea HOM05D008022 ORTHO05D010147 6.9e-16 87.8 53 64.2
Glyma.14G216600 Glycine max HOM05D008022 ORTHO05D010147 6.9e-16 87.8 67 56.7
Cfa013902 Carpinus fangiana HOM05D002906 ORTHO05D003211 1.2e-15 87.0 45 75.6
Glyma.17G255200 Glycine max HOM05D008022 ORTHO05D010147 1.2e-15 87.0 76 51.3
TWI12G0111 Tripterygium wilfordii HOM05D008022 ORTHO05D010147 1.2e-15 87.0 78 50.0
Gohir.A05G188500 Gossypium hirsutum HOM05D008022 ORTHO05D010147 2.0e-15 86.3 44 75.0
Gohir.D05G191600 Gossypium hirsutum HOM05D008022 ORTHO05D010147 2.0e-15 86.3 44 75.0
Gorai.009G196900 Gossypium raimondii HOM05D008022 ORTHO05D010147 5.8e-15 84.7 44 75.0
Nn5g29204 Nelumbo nucifera HOM05D008022 ORTHO05D010147 5.8e-15 84.7 80 50.0
arahy.Tifrunner.gnm1.ann1.RV6KDM Arachis hypogaea HOM05D008022 ORTHO05D010147 9.9e-15 84.0 62 58.1
Duzib041G0305 Durio zibethinus HOM05D008022 ORTHO05D010147 9.9e-15 84.0 40 80.0
BraA07t31648Z Brassica rapa HOM05D008022 ORTHO05D010147 4.9e-14 81.6 78 42.3
BcaC08g47037 Brassica carinata HOM05D008022 ORTHO05D010147 1.1e-13 80.5 78 42.3
A07p41120 Brassica napus HOM05D008022 ORTHO05D010147 1.9e-13 79.7 78 42.3
VMungo1309G0619 Vigna mungo HOM05D002906 ORTHO05D003211 1.9e-13 79.7 47 61.7
BcaC08g47337 Brassica carinata HOM05D008022 ORTHO05D010147 2.4e-13 79.3 78 41.0
BcaC08g47338 Brassica carinata HOM05D008022 ORTHO05D010147 2.4e-13 79.3 78 41.0
AL2G35530 Arabidopsis lyrata HOM05D008022 ORTHO05D010147 4.2e-13 78.6 48 58.3
A02p20010 Brassica napus HOM05D008022 ORTHO05D010147 4.2e-13 78.6 48 58.3
C02p34060 Brassica napus HOM05D008022 ORTHO05D010147 4.2e-13 78.6 48 58.3
BolC2t09304H Brassica oleracea HOM05D008022 ORTHO05D010147 4.2e-13 78.6 48 58.3
BraA02t07039Z Brassica rapa HOM05D008022 ORTHO05D010147 4.2e-13 78.6 48 58.3
C06p49540 Brassica napus HOM05D008022 ORTHO05D010147 9.3e-13 77.4 78 39.7
BolC6t39993H Brassica oleracea HOM05D008022 ORTHO05D010147 9.3e-13 77.4 78 39.7
BcaB05g24920 Brassica carinata HOM05D008022 ORTHO05D010147 1.2e-12 77.0 48 58.3
Carub.0002s2241 Capsella rubella HOM05D008022 ORTHO05D010147 1.6e-12 76.6 48 58.3
CARHR068950 Cardamine hirsuta HOM05D008022 ORTHO05D010147 1.6e-12 76.6 48 58.3
MELO3C018685.2 Cucumis melo HOM05D008022 ORTHO05D010147 1.6e-12 76.6 82 47.6
BcaC08g45567 Brassica carinata HOM05D008022 ORTHO05D010147 2.1e-12 76.3 48 58.3
C06p32520 Brassica napus HOM05D008022 ORTHO05D010147 2.1e-12 76.3 48 58.3
BolC6t38374H Brassica oleracea HOM05D008022 ORTHO05D010147 2.1e-12 76.3 48 58.3
PSO541G2481 Papaver somniferum HOM05D008022 ORTHO05D010147 2.1e-12 76.3 43 72.1
arahy.Tifrunner.gnm1.ann1.0AGT2R Arachis hypogaea HOM05D008022 ORTHO05D010147 2.7e-12 75.9 41 68.3
HPP92_017807 Vanilla planifolia HOM05D008022 ORTHO05D010147 4.6e-12 75.1 57 52.6
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 6.0e-12 74.7 45 62.2
Aqoxy6G02393 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 1.8e-11 73.2 45 64.4
BraA07t30517Z Brassica rapa HOM05D008022 ORTHO05D010147 2.3e-11 72.8 48 54.2
DCAR_017590 Daucus carota HOM05D000043 ORTHO05D000223 8.7e-11 70.9 66 51.5
Prupe.1G370900 Prunus persica HOM05D008022 ORTHO05D010147 1.9e-10 69.7 46 65.2
unitig_8.g4921 Utricularia gibba HOM05D008022 ORTHO05D010147 4.8e-09 65.1 77 41.6
CDE02G3345 Ceratophyllum demersum HOM05D008022 ORTHO05D010147 3.4e-07 58.9 42 52.4


User provided reference genes

Program Settings