Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G3839 Erigeron canadensis HOM05D007041 ORTHO05D008036 1.5e-62 242.7 119 100.0
Lsat_1_v5_gn_7_2180 Lactuca sativa HOM05D007041 ORTHO05D008036 4.8e-29 131.3 118 56.8
Peaxi162Scf00843g00001 Petunia axillaris HOM05D007041 ORTHO05D008036 8.8e-15 84.0 124 42.7
Nitab4.5_0000305g0050 Nicotiana tabacum HOM05D007041 ORTHO05D008036 1.5e-11 73.2 123 36.6
Nitab4.5_0007594g0010 Nicotiana tabacum HOM05D007041 ORTHO05D008036 1.5e-11 73.2 123 38.2
TAR636G2915 Trochodendron aralioides HOM05D007041 ORTHO05D008036 7.7e-11 70.9 122 36.9
Glyma.07G057800 Glycine max HOM05D007041 ORTHO05D008036 6.5e-10 67.8 67 50.7
CiPaw.01G073300 Carya illinoinensis HOM05D007041 ORTHO05D008036 1.9e-09 66.2 68 47.1
Prupe.2G184300 Prunus persica HOM05D007041 ORTHO05D008036 1.9e-09 66.2 129 34.9
MD07G1146000 Malus domestica HOM05D007041 ORTHO05D008036 4.2e-09 65.1 111 36.0
Lj3g0003817 Lotus japonicus HOM05D007041 ORTHO05D008036 9.4e-09 63.9 97 43.3
FAN03G1744 Fragaria x ananassa HOM05D007041 ORTHO05D008036 2.7e-08 62.4 61 54.1
Glyma.16G026800 Glycine max HOM05D007041 ORTHO05D008036 3.6e-08 62.0 55 52.7
Gohir.D08G147100 Gossypium hirsutum HOM05D007041 ORTHO05D008036 3.6e-08 62.0 103 35.9
Gorai.004G152600 Gossypium raimondii HOM05D007041 ORTHO05D008036 3.6e-08 62.0 103 35.9
RcHm_v2.0_Chr1g0358991 Rosa chinensis HOM05D007041 ORTHO05D008036 3.6e-08 62.0 100 40.0
FAN06G2039 Fragaria x ananassa HOM05D007041 ORTHO05D008036 7.9e-08 60.8 61 50.8
FAN06G3979 Fragaria x ananassa HOM05D007041 ORTHO05D008036 7.9e-08 60.8 61 50.8
Actinidia28494 Actinidia chinensis HOM05D000017 ORTHO05D008036 1.0e-07 60.5 93 40.9
COL.COLO4_06320 Corchorus olitorius HOM05D007041 ORTHO05D008036 1.0e-07 60.5 77 42.9
FAN10G1361 Fragaria x ananassa HOM05D007041 ORTHO05D008036 1.0e-07 60.5 106 39.6
FAN10G2988 Fragaria x ananassa HOM05D007041 ORTHO05D008036 1.0e-07 60.5 106 39.6
Rhsim07G0006100 Rhododendron simsii HOM05D000337 ORTHO05D000297 1.0e-07 60.5 55 50.9
CiPaw.02G039100 Carya illinoinensis HOM05D007041 ORTHO05D008036 1.4e-07 60.1 60 50.0
FvH4_7g16050 Fragaria vesca HOM05D007041 ORTHO05D008036 1.4e-07 60.1 61 50.8
Oeu009948.1 Olea europaea HOM05D007041 ORTHO05D008036 1.4e-07 60.1 116 35.3
Phvul.010G111500 Phaseolus vulgaris HOM05D007041 ORTHO05D008036 1.4e-07 60.1 43 58.1
vmacro22517 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 1.4e-07 60.1 43 55.8
SGA_v2.0_scaffold11G05722 Striga asiatica HOM05D007041 ORTHO05D008036 1.8e-07 59.7 49 51.0
HPP92_007621 Vanilla planifolia HOM05D007041 ORTHO05D008036 2.3e-07 59.3 53 50.9
Gohir.D07G144400 Gossypium hirsutum HOM05D007041 ORTHO05D008036 3.0e-07 58.9 46 54.3
Gorai.001G156400 Gossypium raimondii HOM05D007041 ORTHO05D008036 3.0e-07 58.9 46 54.3
Thecc.01G346300 Theobroma cacao HOM05D007041 ORTHO05D008036 3.0e-07 58.9 112 33.9
vmacro22515 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 3.0e-07 58.9 123 30.9
Atru.chr5.628 Acer truncatum HOM05D007041 ORTHO05D008036 3.9e-07 58.5 123 37.4
CSS0019600 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 3.9e-07 58.5 126 34.1
Gohir.A07G139300 Gossypium hirsutum HOM05D007041 ORTHO05D008036 3.9e-07 58.5 65 44.6
CSS0039531 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 6.7e-07 57.8 84 39.3
Oeu007854.1 Olea europaea HOM05D007041 ORTHO05D008036 6.7e-07 57.8 51 49.0
Oeu007855.1 Olea europaea HOM05D007041 ORTHO05D008036 6.7e-07 57.8 98 39.8
PGSC0003DMG400000096 Solanum tuberosum HOM05D007041 ORTHO05D008036 6.7e-07 57.8 116 37.1
C08p36510 Brassica napus HOM05D007041 ORTHO05D008036 8.8e-07 57.4 110 31.8
BolC8t51234H Brassica oleracea HOM05D007041 ORTHO05D008036 8.8e-07 57.4 110 31.8
QL02p031389 Quercus lobata HOM05D007041 ORTHO05D008036 8.8e-07 57.4 99 35.4
AL5G44060 Arabidopsis lyrata HOM05D007041 ORTHO05D008036 1.1e-06 57.0 95 33.7
CSS0049473 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 1.1e-06 57.0 125 34.4
CARHR171970 Cardamine hirsuta HOM05D007041 ORTHO05D008036 1.1e-06 57.0 89 34.8
Prupe.5G115500 Prunus persica HOM05D007041 ORTHO05D008036 1.1e-06 57.0 32 68.8
EL10Ac1g00306 Beta vulgaris HOM05D007041 ORTHO05D008036 1.5e-06 56.6 113 31.9
Manes.02G012400 Manihot esculenta HOM05D007041 ORTHO05D008036 1.5e-06 56.6 62 46.8
VMungo0331G1585 Vigna mungo HOM05D007041 ORTHO05D008036 1.5e-06 56.6 94 38.3
Cpa.g.sc2382.1 Carica papaya HOM05D007041 ORTHO05D008036 2.0e-06 56.2 44 50.0
MELO3C006045.2 Cucumis melo HOM05D007041 ORTHO05D008036 2.0e-06 56.2 42 52.4
Manes.02G012350 Manihot esculenta HOM05D007041 ORTHO05D008036 2.6e-06 55.8 62 46.8
Rhsim01G0170200 Rhododendron simsii HOM05D007041 ORTHO05D008036 3.3e-06 55.5 64 43.8
A09p53730 Brassica napus HOM05D007041 ORTHO05D008036 4.4e-06 55.1 89 37.1
Migut.B01841 Erythranthe guttata HOM05D007041 ORTHO05D008036 4.4e-06 55.1 84 39.3
SalBow3G2736 Salvia bowleyana HOM05D007041 ORTHO05D008036 4.4e-06 55.1 44 54.5
AUR62023489 Chenopodium quinoa HOM05D007041 ORTHO05D008036 5.7e-06 54.7 40 55.0
Glyma.19G254100 Glycine max HOM05D007041 ORTHO05D008036 5.7e-06 54.7 51 49.0
TAR629G2489 Trochodendron aralioides HOM05D007041 ORTHO05D008036 5.7e-06 54.7 126 31.0
BraA09t40795Z Brassica rapa HOM05D007041 ORTHO05D008036 7.4e-06 54.3 89 34.8
Carub.0005s2835 Capsella rubella HOM05D007041 ORTHO05D008036 7.4e-06 54.3 31 61.3
CsaV3_3G008250 Cucumis sativus L. HOM05D007041 ORTHO05D008036 7.4e-06 54.3 40 52.5
Thhalv10006386m.g Eutrema salsugineum HOM05D007041 ORTHO05D008036 7.4e-06 54.3 31 61.3
Nn1g01816 Nelumbo nucifera HOM05D007041 ORTHO05D008036 7.4e-06 54.3 44 50.0
Sp5g01745 Schrenkiella parvula HOM05D007041 ORTHO05D008036 7.4e-06 54.3 31 61.3
AT3G61660 Arabidopsis thaliana HOM05D007041 ORTHO05D008036 9.7e-06 53.9 89 32.6
CANSAT56G1227 Cannabis sativa HOM05D007041 ORTHO05D008036 9.7e-06 53.9 30 66.7
Medtr8g027305 Medicago truncatula HOM05D007041 ORTHO05D008036 9.7e-06 53.9 53 52.8
Sc01g0010130 Simmondsia chinensis HOM05D007041 ORTHO05D008036 9.7e-06 53.9 43 46.5


User provided reference genes

Program Settings