Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G3836 Erigeron canadensis HOM05D001925 ORTHO05D005701 1.7e-296 1021.9 523 100.0
HanXRQChr04g0121151 Helianthus annuus HOM05D001925 ORTHO05D005701 2.6e-228 795.4 541 77.1
Lsat_1_v5_gn_7_4881 Lactuca sativa HOM05D001925 ORTHO05D005701 3.8e-211 738.4 520 74.8
vmacro13268 Vaccinium macrocarpon HOM05D001925 ORTHO05D005701 8.7e-200 700.7 544 68.0
Actinidia10039 Actinidia chinensis HOM05D001925 ORTHO05D005701 1.6e-198 696.4 543 67.8
CSS0009302 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 1.2e-196 690.3 544 67.5
CSS0022743 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 1.2e-196 690.3 544 67.5
Rhsim07G0013900 Rhododendron simsii HOM05D001925 ORTHO05D005701 8.4e-195 684.1 544 66.9
Lj6A572T62 Lonicera japonica HOM05D001925 ORTHO05D005701 3.0e-192 675.6 549 65.6
Lj6A578T43 Lonicera japonica HOM05D001925 ORTHO05D005701 3.9e-192 675.2 549 65.6
QL04p053597 Quercus lobata HOM05D001925 ORTHO05D005701 3.9e-192 675.2 537 65.2
DCAR_007446 Daucus carota HOM05D001925 ORTHO05D005701 3.1e-189 665.6 538 65.4
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 2.2e-187 659.4 542 63.7
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 3.8e-187 658.7 542 62.9
CiPaw.01G062800 Carya illinoinensis HOM05D001925 ORTHO05D005701 8.4e-187 657.5 542 62.7
GSVIVG01008477001 Vitis vinifera HOM05D001925 ORTHO05D005701 1.1e-186 657.1 531 65.2
TAR636G2317 Trochodendron aralioides HOM05D001925 ORTHO05D005701 4.6e-185 651.7 533 63.8
Atru.chr5.509 Acer truncatum HOM05D001925 ORTHO05D005701 6.7e-184 647.9 543 62.6
CANSAT56G3724 Cannabis sativa HOM05D001925 ORTHO05D005701 6.7e-184 647.9 539 63.5
Cc02_g38160 Coffea canephora HOM05D001925 ORTHO05D005701 4.3e-183 645.2 540 62.8
Potri.014G085900 Populus trichocarpa HOM05D001925 ORTHO05D005701 1.6e-182 643.3 542 63.8
Sabra14G0062200 Salix brachista HOM05D001925 ORTHO05D005701 3.7e-182 642.1 542 63.3
Peaxi162Scf00020g00723 Petunia axillaris HOM05D001925 ORTHO05D005701 3.1e-181 639.0 537 61.8
Duzib138G1334 Durio zibethinus HOM05D001925 ORTHO05D005701 5.3e-181 638.3 538 63.6
Ciclev10019660m.g Citrus clementina HOM05D001925 ORTHO05D005701 1.0e-179 634.0 541 62.1
Gohir.A11G089700 Gossypium hirsutum HOM05D001925 ORTHO05D005701 2.9e-179 632.5 539 62.9
Cpa.g.sc11.17 Carica papaya HOM05D001925 ORTHO05D005701 8.5e-179 630.9 532 60.9
Nn6g33390 Nelumbo nucifera HOM05D001925 ORTHO05D005701 1.4e-178 630.2 534 61.4
Manes.05G033300 Manihot esculenta HOM05D001925 ORTHO05D005701 2.5e-178 629.4 535 62.2
Gorai.007G100400 Gossypium raimondii HOM05D001925 ORTHO05D005701 1.2e-177 627.1 539 62.7
Nitab4.5_0000583g0200 Nicotiana tabacum HOM05D001925 ORTHO05D005701 2.7e-177 625.9 537 60.9
Migut.B01766 Erythranthe guttata HOM05D001925 ORTHO05D005701 4.6e-177 625.2 537 60.9
Lj1g0000866 Lotus japonicus HOM05D001925 ORTHO05D005701 2.3e-176 622.9 531 61.0
Gohir.D11G094000 Gossypium hirsutum HOM05D001925 ORTHO05D005701 3.0e-176 622.5 539 62.5
TWI73G0882 Tripterygium wilfordii HOM05D001925 ORTHO05D005701 3.0e-176 622.5 532 61.1
ClCG06G003620 Citrullus lanatus HOM05D001925 ORTHO05D005701 5.1e-176 621.7 540 60.7
CAN.G78.90 Capsicum annuum HOM05D001925 ORTHO05D005701 6.7e-176 621.3 531 60.8
MELO3C021204.2 Cucumis melo HOM05D001925 ORTHO05D005701 8.7e-176 620.9 540 60.7
Sed0000605 Sechium edule HOM05D001925 ORTHO05D005701 4.3e-175 618.6 539 60.3
Glyma.18G234000 Glycine max HOM05D001925 ORTHO05D005701 5.7e-175 618.2 538 60.0
SalBow3G0216 Salvia bowleyana HOM05D001925 ORTHO05D005701 7.4e-175 617.8 518 63.1
Medtr7g077840 Medicago truncatula HOM05D001925 ORTHO05D005701 9.7e-175 617.5 543 59.7
Lj7A511T78 Lonicera japonica HOM05D001925 ORTHO05D005701 1.7e-174 616.7 527 63.4
MD01G1065000 Malus domestica HOM05D001925 ORTHO05D005701 2.8e-174 615.9 539 60.7
Ca_07928_v3 Cicer arietinum L. HOM05D001925 ORTHO05D005701 4.8e-174 615.1 541 59.1
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 6.3e-174 614.8 538 61.7
Thecc.01G357800 Theobroma cacao HOM05D001925 ORTHO05D005701 8.2e-174 614.4 530 62.5
THA.LOC104825846 Tarenaya hassleriana HOM05D001925 ORTHO05D005701 1.1e-173 614.0 541 61.7
RcHm_v2.0_Chr1g0355901 Rosa chinensis HOM05D001925 ORTHO05D005701 1.4e-173 613.6 503 62.8
RcHm_v2.0_Chr2g0161261 Rosa chinensis HOM05D001925 ORTHO05D005701 3.1e-173 612.5 501 62.3
Oeu015817.1 Olea europaea HOM05D001925 ORTHO05D005701 4.1e-173 612.1 544 59.9
FvH4_7g14490 Fragaria vesca HOM05D001925 ORTHO05D005701 1.2e-172 610.5 504 61.9
Sopen01g038540 Solanum pennellii HOM05D001925 ORTHO05D005701 1.5e-172 610.1 531 60.8
VMungo1383G1901 Vigna mungo HOM05D001925 ORTHO05D005701 2.6e-172 609.4 543 59.7
MBI04_g28752_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D005701 3.4e-172 609.0 534 59.6
Phvul.008G061800 Phaseolus vulgaris HOM05D001925 ORTHO05D005701 3.4e-172 609.0 543 59.9
Eucgr.L01587 Eucalyptus grandis HOM05D001925 ORTHO05D005701 4.5e-172 608.6 541 59.3
Psat4g001160 Pisum sativum HOM05D001925 ORTHO05D005701 5.9e-172 608.2 531 60.3
Prupe.2G172000 Prunus persica HOM05D001925 ORTHO05D005701 1.3e-171 607.1 502 62.4
BraA07t29988Z Brassica rapa HOM05D001925 ORTHO05D005701 1.7e-171 606.7 531 59.3
arahy.Tifrunner.gnm1.ann1.69YTHK Arachis hypogaea HOM05D001925 ORTHO05D005701 2.9e-171 605.9 538 59.5
Solyc01g094760.3 Solanum lycopersicum HOM05D001925 ORTHO05D005701 3.8e-171 605.5 531 60.5
AL7G22330 Arabidopsis lyrata HOM05D001925 ORTHO05D005701 1.1e-170 604.0 539 58.4
PGSC0003DMG400000174 Solanum tuberosum HOM05D001925 ORTHO05D005701 1.4e-170 603.6 531 60.1
AT4G29910 Arabidopsis thaliana HOM05D001925 ORTHO05D005701 1.2e-169 600.5 535 59.1
A07p23240 Brassica napus HOM05D001925 ORTHO05D005701 1.2e-169 600.5 531 58.9
BcaC08g44822 Brassica carinata HOM05D001925 ORTHO05D005701 2.1e-169 599.7 532 59.2
SGA_v2.0_scaffold4G02302 Striga asiatica HOM05D001925 ORTHO05D005701 2.1e-169 599.7 521 61.4
BolC6t37570H Brassica oleracea HOM05D001925 ORTHO05D005701 1.8e-168 596.7 532 59.0
BcaB02g07622 Brassica carinata HOM05D001925 ORTHO05D005701 3.0e-168 595.9 532 58.8
C06p24120 Brassica napus HOM05D001925 ORTHO05D005701 3.9e-168 595.5 532 58.8
arahy.Tifrunner.gnm1.ann1.NC5V2N Arachis hypogaea HOM05D001925 ORTHO05D005701 1.1e-167 594.0 539 59.9
CARHR237820 Cardamine hirsuta HOM05D001925 ORTHO05D005701 4.4e-167 592.0 519 59.7
Lalb_Chr13g0304081 Lupinus albus HOM05D001925 ORTHO05D005701 5.7e-167 591.7 518 60.4
PGR004G0833 Punica granatum HOM05D001925 ORTHO05D005701 5.7e-167 591.7 543 56.9
arahy.Tifrunner.gnm1.ann1.9GVB5D Arachis hypogaea HOM05D001925 ORTHO05D005701 9.7e-167 590.9 539 59.2
Sp5g05460 Schrenkiella parvula HOM05D001925 ORTHO05D005701 9.7e-167 590.9 534 59.2
Nitab4.5_0006018g0050 Nicotiana tabacum HOM05D001925 ORTHO05D005701 3.4e-164 582.4 510 60.2
Eucgr.D01236 Eucalyptus grandis HOM05D001925 ORTHO05D005701 1.9e-162 576.6 529 58.4
Thhalv10005869m.g Eutrema salsugineum HOM05D001925 ORTHO05D005701 2.7e-161 572.8 540 56.5
PSO384G0118 Papaver somniferum HOM05D001925 ORTHO05D005701 8.0e-161 571.2 522 59.0
BcaB02g07621 Brassica carinata HOM05D001925 ORTHO05D005701 1.8e-160 570.1 532 57.1
EL10Ac1g00402 Beta vulgaris HOM05D001925 ORTHO05D005701 2.3e-160 569.7 547 56.9
FAN03G1293 Fragaria x ananassa HOM05D001925 ORTHO05D005701 4.4e-159 565.5 504 58.7
FAN10G1478 Fragaria x ananassa HOM05D001925 ORTHO05D005701 7.4e-159 564.7 504 58.5
CDE08G0676 Ceratophyllum demersum HOM05D001925 ORTHO05D005701 1.7e-158 563.5 526 56.8
Aqoxy2G04021 Aquilegia oxysepala HOM05D001925 ORTHO05D005701 2.8e-158 562.8 544 55.3
FAN06G1763 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.7e-158 562.4 504 58.3
FAN10G3665 Fragaria x ananassa HOM05D001925 ORTHO05D005701 8.2e-158 561.2 504 58.3
FAN06G3551 Fragaria x ananassa HOM05D001925 ORTHO05D005701 7.0e-157 558.1 504 58.1
ATR0068G004 Amborella trichopoda HOM05D001925 ORTHO05D005701 2.6e-156 556.2 497 55.9
TPR.G37845 Trifolium pratense HOM05D001925 ORTHO05D005701 4.5e-156 555.4 540 56.3
Hund16654 Selenicereus undatus HOM05D001925 ORTHO05D005701 6.5e-155 551.6 528 55.9
Glyma.09G258700 Glycine max HOM05D001925 ORTHO05D005701 1.1e-154 550.8 540 55.6
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 5.5e-154 548.5 505 57.4
Aa31LG2G20640 Aethionema arabicum HOM05D001925 ORTHO05D005701 6.7e-152 541.6 532 54.3
Ah.05g180520 Amaranthus hybridus HOM05D001925 ORTHO05D001453 2.7e-145 519.6 530 53.4
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 4.4e-143 512.3 409 64.3
ECA236G4017 Erigeron canadensis HOM05D001925 ORTHO05D005701 4.4e-143 512.3 312 86.5
AUR62004371 Chenopodium quinoa HOM05D001925 ORTHO05D005701 1.9e-138 496.9 554 50.0
AUR62022580 Chenopodium quinoa HOM05D001925 ORTHO05D005701 7.2e-138 495.0 545 50.5
Carub.0007s1073 Capsella rubella HOM05D001925 ORTHO05D005701 3.5e-132 476.1 410 60.2
Os03g0759500 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D005701 7.3e-130 468.4 483 53.4
Zm00001eb214490 Zea mays HOM05D001925 ORTHO05D005701 9.8e-127 458.0 484 52.1
CsaV3_6G000620 Cucumis sativus L. HOM05D001925 ORTHO05D005701 3.7e-126 456.1 419 57.8
Sc01g0003490 Simmondsia chinensis HOM05D001925 ORTHO05D005701 3.0e-123 446.4 412 57.8
PSO339G3045 Papaver somniferum HOM05D001925 ORTHO05D005701 1.9e-117 427.2 479 50.7
Carub.0002s1689 Capsella rubella HOM05D001925 ORTHO05D005701 9.2e-117 424.9 355 61.7
SEGI_03119 Sequoiadendron giganteum HOM05D001925 ORTHO05D005701 6.6e-115 418.7 570 40.7
Oeu050467.2 Olea europaea HOM05D001925 ORTHO05D005701 1.5e-111 407.5 526 47.5
arahy.Tifrunner.gnm1.ann1.IR4EKV Arachis hypogaea HOM05D001925 ORTHO05D005701 1.8e-104 384.0 317 62.5
HPP92_019868 Vanilla planifolia HOM05D001925 ORTHO05D005701 1.4e-101 374.4 350 57.4
BcaC07g40027 Brassica carinata HOM05D001925 ORTHO05D005701 2.7e-100 370.2 453 47.9
arahy.Tifrunner.gnm1.ann1.SID920 Arachis hypogaea HOM05D001925 ORTHO05D005701 9.0e-96 355.1 417 50.4
Pp3c17_13600 Physcomitrium patens HOM05D001925 ORTHO05D005701 1.1e-93 348.2 513 39.8
AagrBONN_evm.TU.Sc2ySwM_368.2511 Anthoceros agrestis HOM05D001925 ORTHO05D005701 1.2e-92 344.7 491 39.9
SMO147G0283 Selaginella moellendorffii HOM05D001925 ORTHO05D005701 7.8e-92 342.0 504 39.9
Mapoly0177s0008 Marchantia polymorpha HOM05D001925 ORTHO05D005701 2.6e-87 327.0 470 39.6
C08p32440 Brassica napus HOM05D001925 ORTHO05D005701 3.9e-83 313.2 491 40.9
BolC8t50859H Brassica oleracea HOM05D001925 ORTHO05D005701 1.1e-82 311.6 491 40.9
arahy.Tifrunner.gnm1.ann1.D25PMP Arachis hypogaea HOM05D001925 ORTHO05D005701 1.2e-79 301.6 417 45.6
MD07G1135400 Malus domestica HOM05D001925 ORTHO05D005701 5.8e-79 299.3 340 50.6
Potri.001G135975 Populus trichocarpa HOM05D001925 ORTHO05D005701 6.9e-72 275.8 265 54.3
TPR.G26686 Trifolium pratense HOM05D001925 ORTHO05D005701 1.4e-59 235.0 270 48.5
arahy.Tifrunner.gnm1.ann1.IM3547 Arachis hypogaea HOM05D001925 ORTHO05D005701 4.2e-53 213.4 213 54.5
arahy.Tifrunner.gnm1.ann1.FEJ64N Arachis hypogaea HOM05D001925 ORTHO05D005701 1.6e-52 211.5 236 52.1
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 2.5e-45 187.6 167 56.3
Dinv43826 Davidia involucrata HOM05D001925 ORTHO05D005701 5.3e-40 169.9 113 77.9
BraA09t40455Z Brassica rapa HOM05D001925 ORTHO05D005701 1.1e-37 162.2 170 56.5
CBR_g58810 Chara braunii HOM05D001925 ORTHO05D005701 4.7e-36 156.8 535 28.0
TPR.G16202 Trifolium pratense HOM05D001925 ORTHO05D005701 4.7e-36 156.8 123 65.0
C06p24140 Brassica napus HOM05D001925 ORTHO05D005701 9.7e-34 149.1 113 70.8
MCO11G226 Micromonas commoda HOM05D001925 ORTHO05D005701 2.8e-33 147.5 571 24.7
FvH4_2g10060 Fragaria vesca HOM05D001925 ORTHO05D005701 1.1e-32 145.6 204 44.1
FAN24G1219 Fragaria x ananassa HOM05D001925 ORTHO05D005701 9.1e-32 142.5 105 69.5
FAN15G3430 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.2e-28 132.1 104 65.4
BcaC08g44824 Brassica carinata HOM05D001925 ORTHO05D005701 2.1e-28 131.3 115 62.6
FvH4_2g10061 Fragaria vesca HOM05D001925 ORTHO05D005701 8.8e-27 125.9 97 67.0
A09p50040 Brassica napus HOM05D001925 ORTHO05D005701 4.4e-26 123.6 90 71.1
Zm00001eb057980 Zea mays HOM05D001925 ORTHO05D005701 5.7e-26 123.2 385 28.8
PRCOL_00005952 Prasinoderma coloniale HOM05D001925 ORTHO05D005701 5.9e-23 113.2 398 27.1
arahy.Tifrunner.gnm1.ann1.ZHBQ27 Arachis hypogaea HOM05D002506 ORTHO05D002879 2.9e-22 110.9 89 66.3
A09p50030 Brassica napus HOM05D001925 ORTHO05D005701 5.0e-22 110.2 109 52.3
C09p49930 Brassica napus HOM05D001925 ORTHO05D039571 2.7e-15 87.8 122 46.7
Cre07.g355200 Chlamydomonas reinhardtii HOM05D001925 ORTHO05D005701 2.5e-13 81.3 560 22.1
MBI04_g47116_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D005701 2.8e-12 77.8 237 29.1
BcaC07g40074 Brassica carinata HOM05D001925 ORTHO05D005701 1.0e-11 75.9 83 57.8
Thhalv10027287m.g Eutrema salsugineum HOM05D001925 ORTHO05D005701 7.0e-08 63.2 90 35.6


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