Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G3743 Erigeron canadensis HOM05D001243 ORTHO05D000843 2.1e-177 625.5 304 100.0
ECA238G4855 Erigeron canadensis HOM05D001243 ORTHO05D000843 1.9e-82 310.1 320 60.0
ECA236G5075 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.7e-76 289.7 292 59.6
ECA236G0138 Erigeron canadensis HOM05D001243 ORTHO05D000843 3.2e-45 186.4 159 66.7
HanXRQChr10g0312951 Helianthus annuus HOM05D001243 ORTHO05D000843 3.0e-43 179.9 304 42.1
HanXRQChr14g0450571 Helianthus annuus HOM05D001243 ORTHO05D000843 4.3e-42 176.0 302 40.7
Lsat_1_v5_gn_3_73020 Lactuca sativa HOM05D001243 ORTHO05D000843 4.6e-36 156.0 301 39.2
HanXRQChr08g0232091 Helianthus annuus HOM05D001243 ORTHO05D000843 1.3e-35 154.5 300 38.0
HanXRQChr08g0226741 Helianthus annuus HOM05D001243 ORTHO05D000843 2.0e-31 140.6 292 37.0
Lsat_1_v5_gn_0_22301 Lactuca sativa HOM05D001243 ORTHO05D000843 1.5e-26 124.4 302 34.8
Lsat_1_v5_gn_2_71061 Lactuca sativa HOM05D001243 ORTHO05D000843 5.9e-15 85.9 195 36.9
HanXRQChr07g0194121 Helianthus annuus HOM05D001243 ORTHO05D035137 1.0e-14 85.1 332 29.8
HanXRQChr11g0335991 Helianthus annuus HOM05D001243 ORTHO05D035137 5.0e-14 82.8 334 30.2
Thecc.10G177700 Theobroma cacao HOM05D000051 ORTHO05D000843 1.0e-11 75.1 342 26.3
Thecc.10G177600 Theobroma cacao HOM05D000051 ORTHO05D000843 1.1e-10 71.6 234 28.2
ECA238G4666 Erigeron canadensis HOM05D001243 ORTHO05D000843 2.0e-10 70.9 228 32.9
Potri.011G104200 Populus trichocarpa HOM05D000051 ORTHO05D000843 5.7e-10 69.3 346 26.9
Actinidia03267 Actinidia chinensis HOM05D001243 ORTHO05D000843 7.5e-10 68.9 329 27.4
Potri.011G104100 Populus trichocarpa HOM05D000051 ORTHO05D000843 2.2e-09 67.4 347 26.5
ECA240G3709 Erigeron canadensis HOM05D001243 ORTHO05D000843 4.8e-09 66.2 171 32.7
Lalb_Chr07g0185831 Lupinus albus HOM05D001243 ORTHO05D000843 4.8e-09 66.2 186 28.5
COL.COLO4_38574 Corchorus olitorius HOM05D000051 ORTHO05D000843 8.2e-09 65.5 315 23.5
Lsat_1_v5_gn_3_26861 Lactuca sativa HOM05D001243 ORTHO05D000843 8.2e-09 65.5 345 25.2
VMungo0647G0298 Vigna mungo HOM05D001243 ORTHO05D000843 8.2e-09 65.5 181 27.6
Dinv10495 Davidia involucrata HOM05D001243 ORTHO05D000843 2.4e-08 63.9 296 24.3
Lsat_1_v5_gn_3_23280 Lactuca sativa HOM05D001243 ORTHO05D000843 2.4e-08 63.9 330 25.2
Potri.011G104300 Populus trichocarpa HOM05D000051 ORTHO05D000843 2.4e-08 63.9 345 27.2
Thecc.10G178300 Theobroma cacao HOM05D000051 ORTHO05D000843 3.1e-08 63.5 184 30.4
Thecc.10G178800 Theobroma cacao HOM05D000051 ORTHO05D000843 3.1e-08 63.5 342 24.9
Thecc.10G178600 Theobroma cacao HOM05D000051 ORTHO05D000843 4.1e-08 63.2 184 29.9
Dinv10494 Davidia involucrata HOM05D001243 ORTHO05D000843 5.3e-08 62.8 326 25.5
Thecc.10G178200 Theobroma cacao HOM05D000051 ORTHO05D000843 1.6e-07 61.2 316 25.3
Thecc.10G178500 Theobroma cacao HOM05D000051 ORTHO05D000843 1.6e-07 61.2 316 25.3
HanXRQChr17g0537121 Helianthus annuus HOM05D001243 ORTHO05D000843 5.9e-07 59.3 358 26.8
COL.COLO4_38580 Corchorus olitorius HOM05D000051 ORTHO05D000843 2.2e-06 57.4 208 29.3
arahy.Tifrunner.gnm1.ann1.ZEI2BD Arachis hypogaea HOM05D001243 ORTHO05D000843 2.9e-06 57.0 311 26.0
COL.COLO4_10029 Corchorus olitorius HOM05D001243 ORTHO05D000843 2.9e-06 57.0 239 28.9
Psat7g104640 Pisum sativum HOM05D001243 ORTHO05D000843 5.0e-06 56.2 310 25.8
Potri.015G002001 Populus trichocarpa HOM05D001243 ORTHO05D000843 5.0e-06 56.2 226 27.0
RcHm_v2.0_Chr5g0069821 Rosa chinensis HOM05D000051 ORTHO05D000015 6.5e-06 55.8 191 28.3
Thecc.10G178400 Theobroma cacao HOM05D001243 ORTHO05D000843 6.5e-06 55.8 213 26.8
arahy.Tifrunner.gnm1.ann1.FC16B5 Arachis hypogaea HOM05D001243 ORTHO05D000843 8.5e-06 55.5 308 25.6


User provided reference genes

Program Settings