Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 0.0e+00 1131.7 577 100.0
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 1.4e-235 819.7 594 75.3
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 1.2e-231 806.6 594 74.2
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 7.1e-195 684.5 596 66.1
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 1.8e-153 547.0 662 52.6
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 1.5e-144 517.3 637 52.7
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 1.8e-142 510.4 657 50.1
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 2.4e-142 510.0 652 50.0
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 7.7e-141 505.0 654 49.1
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 2.5e-139 500.0 653 49.6
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 4.2e-139 499.2 652 50.5
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 7.2e-139 498.4 658 50.6
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.4e-137 494.2 656 49.5
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 1.2e-136 491.1 638 49.2
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 1.8e-134 483.8 607 52.7
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 9.1e-134 481.5 645 48.7
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 7.7e-133 478.4 650 48.0
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 3.8e-132 476.1 651 48.2
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 2.5e-131 473.4 633 49.0
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 1.2e-130 471.1 642 50.0
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 3.4e-128 463.0 637 48.7
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 4.4e-128 462.6 645 47.4
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 1.3e-127 461.1 642 47.4
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 8.3e-127 458.4 645 47.4
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 5.4e-126 455.7 638 48.6
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 5.9e-125 452.2 650 46.5
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 7.8e-125 451.8 650 46.2
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 1.7e-124 450.7 642 46.4
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 2.9e-124 449.9 644 47.5
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 5.0e-124 449.1 652 46.0
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 3.3e-123 446.4 642 46.6
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 3.6e-122 443.0 646 47.2
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 1.0e-121 441.4 678 45.0
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 3.0e-121 439.9 643 46.5
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 3.0e-121 439.9 652 47.1
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 4.0e-121 439.5 653 46.2
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 8.9e-121 438.3 643 45.4
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 2.0e-120 437.2 633 47.2
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 2.0e-120 437.2 633 47.2
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 2.6e-120 436.8 645 45.3
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 2.6e-120 436.8 698 44.6
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 3.4e-120 436.4 655 45.5
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 3.7e-119 433.0 662 45.2
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 1.1e-118 431.4 645 45.0
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 5.4e-118 429.1 642 46.0
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 5.4e-118 429.1 637 45.2
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 9.2e-118 428.3 642 45.6
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 7.8e-117 425.2 643 46.2
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 1.3e-116 424.5 697 44.8
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 2.3e-116 423.7 633 47.7
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 3.0e-116 423.3 642 46.0
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 3.0e-116 423.3 659 44.8
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 8.6e-116 421.8 653 44.0
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 1.1e-115 421.4 646 44.9
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 1.1e-115 421.4 642 45.5
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 3.3e-115 419.9 632 46.0
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 9.5e-115 418.3 635 45.4
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 1.6e-114 417.5 637 45.4
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 1.8e-113 414.1 646 44.9
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 1.8e-113 414.1 641 45.6
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 2.0e-112 410.6 627 46.4
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 3.7e-111 406.4 636 44.3
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 3.2e-110 403.3 649 44.1
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 9.2e-110 401.7 623 46.2
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 3.5e-109 399.8 648 44.9
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 3.5e-109 399.8 670 43.6
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 4.6e-109 399.4 658 42.6
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 3.0e-108 396.7 646 43.7
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 1.1e-107 394.8 608 45.4
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 4.3e-107 392.9 649 43.6
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 8.1e-106 388.7 656 43.4
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 3.1e-105 386.7 523 49.5
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 1.2e-104 384.8 655 42.6
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 6.4e-103 379.0 674 42.6
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 9.2e-102 375.2 611 43.7
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 2.1e-101 374.0 652 42.2
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 2.7e-101 373.6 611 43.5
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 6.8e-97 359.0 548 43.8
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 8.9e-97 358.6 643 42.1
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 9.9e-96 355.1 653 40.9
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 3.5e-93 346.7 651 42.5
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 8.1e-90 335.5 616 41.1
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 8.1e-90 335.5 602 41.5
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 3.1e-89 333.6 633 40.6
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 9.9e-88 328.6 636 39.6
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.7e-87 327.8 544 42.8
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.9e-87 327.0 437 48.3
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 8.4e-87 325.5 503 43.3
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 3.5e-85 320.1 450 46.2
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 4.6e-85 319.7 625 40.0
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 8.7e-84 315.5 635 39.2
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 1.1e-83 315.1 605 40.7
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 1.3e-82 311.6 633 39.0
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.8e-81 307.8 489 45.2
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 3.1e-81 307.0 620 38.9
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 9.0e-81 305.4 613 39.5
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 5.8e-80 302.8 449 44.5
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 2.2e-79 300.8 620 40.2
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 3.8e-79 300.1 636 37.3
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 1.9e-78 297.7 636 37.9
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 1.2e-77 295.0 690 37.5
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 2.7e-77 293.9 447 44.3
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 1.3e-76 291.6 596 39.9
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 1.8e-76 291.2 636 36.8
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 1.1e-75 288.5 629 37.4
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 1.5e-75 288.1 630 37.5
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 9.6e-75 285.4 638 36.7
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 9.6e-75 285.4 626 37.7
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 9.6e-75 285.4 647 38.0
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 1.4e-73 281.6 752 33.9
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 4.0e-73 280.0 662 36.4
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 4.0e-73 280.0 478 43.1
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 9.9e-72 275.4 613 37.5
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 9.9e-72 275.4 438 43.4
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 3.2e-70 270.4 482 39.6
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 5.5e-70 269.6 629 36.1
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 4.3e-67 260.0 643 37.9
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 8.2e-58 229.2 447 38.7
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 8.2e-58 229.2 577 35.0
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 1.5e-56 224.9 605 35.7
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 1.0e-55 222.2 438 37.9
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 2.9e-55 220.7 622 34.1
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 7.4e-51 206.1 317 47.6
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 5.3e-49 199.9 711 31.8
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 5.5e-46 189.9 167 61.7
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 4.7e-37 160.2 133 62.4
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 2.0e-35 154.8 184 54.3
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 2.2e-34 151.4 253 41.9
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 4.0e-28 130.6 405 33.3
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 1.2e-21 109.0 729 25.4
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 2.4e-17 94.7 193 40.9
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 5.4e-17 93.6 118 50.8
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 9.1e-17 92.8 299 32.4
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 4.2e-14 84.0 180 37.8
QL05p012359 Quercus lobata HOM05D005409 ORTHO05D006456 1.4e-12 79.0 106 50.0
Actinidia26960 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.8e-12 78.6 85 57.6
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 4.0e-12 77.4 107 42.1
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 5.7e-11 73.6 195 36.4
SEGI_29006 Sequoiadendron giganteum HOM05D005409 ORTHO05D006456 7.8e-08 63.2 246 29.7
CAN.G466.8 Capsicum annuum HOM05D005409 ORTHO05D006456 1.5e-06 58.9 97 39.2


User provided reference genes

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