Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G3562 Erigeron canadensis HOM05D003670 ORTHO05D004767 8.3e-185 650.2 323 100.0
Lsat_1_v5_gn_7_110680 Lactuca sativa HOM05D003670 ORTHO05D004767 2.1e-172 609.0 321 92.2
HanXRQChr11g0335601 Helianthus annuus HOM05D003670 ORTHO05D004767 2.9e-169 598.6 320 90.9
CSS0006756 Camellia sinensis var. sinensis HOM05D003670 ORTHO05D004767 1.1e-165 586.6 319 88.7
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 4.3e-165 584.7 318 88.4
Rhsim06G0242300 Rhododendron simsii HOM05D003670 ORTHO05D004767 8.1e-164 580.5 317 87.7
Nitab4.5_0006241g0010 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.4e-163 579.7 318 88.1
PGSC0003DMG400022232 Solanum tuberosum HOM05D003670 ORTHO05D004767 2.0e-162 575.9 318 87.7
Lj3g0014239 Lotus japonicus HOM05D003670 ORTHO05D004767 4.4e-162 574.7 322 85.1
GSVIVG01036786001 Vitis vinifera HOM05D003670 ORTHO05D004767 9.9e-162 573.5 323 85.1
CAN.G943.51 Capsicum annuum HOM05D003670 ORTHO05D004767 1.7e-161 572.8 323 86.1
Peaxi162Scf00452g00333 Petunia axillaris HOM05D003670 ORTHO05D004767 2.2e-161 572.4 321 85.4
COL.COLO4_32264 Corchorus olitorius HOM05D003670 ORTHO05D004767 2.9e-161 572.0 320 84.7
Nitab4.5_0000029g0340 Nicotiana tabacum HOM05D003670 ORTHO05D004767 2.9e-161 572.0 318 86.5
MD05G1228000 Malus domestica HOM05D003670 ORTHO05D004767 6.4e-161 570.9 323 85.4
Solyc07g066580.3 Solanum lycopersicum HOM05D003670 ORTHO05D004767 6.4e-161 570.9 309 88.7
Sopen07g034740 Solanum pennellii HOM05D003670 ORTHO05D004767 6.4e-161 570.9 309 88.7
TAR583G0001 Trochodendron aralioides HOM05D003670 ORTHO05D004767 6.4e-161 570.9 314 85.7
Migut.H01671 Erythranthe guttata HOM05D003670 ORTHO05D004767 1.1e-160 570.1 318 85.5
Gohir.A13G123400 Gossypium hirsutum HOM05D003670 ORTHO05D004767 1.1e-160 570.1 319 84.6
PGR031G1669 Punica granatum HOM05D003670 ORTHO05D004767 1.1e-160 570.1 318 85.2
CiPaw.11G061900 Carya illinoinensis HOM05D003670 ORTHO05D004767 1.4e-160 569.7 318 85.8
Gohir.D13G127300 Gossypium hirsutum HOM05D003670 ORTHO05D004767 1.4e-160 569.7 319 84.6
Peaxi162Scf00006g00159 Petunia axillaris HOM05D003670 ORTHO05D004767 1.9e-160 569.3 318 85.5
Manes.06G175700 Manihot esculenta HOM05D003670 ORTHO05D004767 3.2e-160 568.5 318 84.9
Gorai.013G142500 Gossypium raimondii HOM05D003670 ORTHO05D004767 9.3e-160 567.0 320 84.7
Nitab4.5_0005765g0040 Nicotiana tabacum HOM05D003670 ORTHO05D004767 9.3e-160 567.0 318 86.2
Cc05_g16310 Coffea canephora HOM05D003670 ORTHO05D004767 1.2e-159 566.6 319 85.0
PSO675G6901 Papaver somniferum HOM05D003670 ORTHO05D004767 2.1e-159 565.8 314 85.4
TPR.G33813 Trifolium pratense HOM05D003670 ORTHO05D004767 2.7e-159 565.5 320 83.1
PSO541G1524 Papaver somniferum HOM05D003670 ORTHO05D004767 3.5e-159 565.1 326 83.7
Prupe.4G134300 Prunus persica HOM05D003670 ORTHO05D004767 3.5e-159 565.1 319 84.3
TWI39G0091 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 4.6e-159 564.7 318 85.8
Potri.007G069300 Populus trichocarpa HOM05D003670 ORTHO05D004767 6.0e-159 564.3 314 84.4
Medtr2g067080 Medicago truncatula HOM05D003670 ORTHO05D004767 7.8e-159 563.9 323 83.0
Oeu002796.1 Olea europaea HOM05D003670 ORTHO05D004767 1.0e-158 563.5 318 84.0
Manes.14G010300 Manihot esculenta HOM05D003670 ORTHO05D004767 1.3e-158 563.1 317 85.5
Duzib187G0441 Durio zibethinus HOM05D003670 ORTHO05D004767 1.7e-158 562.8 319 83.1
Nn7g37780 Nelumbo nucifera HOM05D003670 ORTHO05D004767 2.3e-158 562.4 318 84.3
MD10G1208500 Malus domestica HOM05D003670 ORTHO05D004767 3.0e-158 562.0 321 84.1
Ciclev10005196m.g Citrus clementina HOM05D003670 ORTHO05D004767 6.6e-158 560.8 319 84.6
FvH4_3g14990 Fragaria vesca HOM05D003670 ORTHO05D004767 6.6e-158 560.8 321 83.5
Ca_03600_v3 Cicer arietinum L. HOM05D003670 ORTHO05D004767 8.7e-158 560.5 318 83.3
FAN11G2825 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.1e-157 560.1 321 83.5
QL04p088520 Quercus lobata HOM05D003670 ORTHO05D004767 4.3e-157 558.1 343 79.3
TWI38G1711 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 4.3e-157 558.1 317 84.5
FAN21G1395 Fragaria x ananassa HOM05D003670 ORTHO05D004767 5.6e-157 557.8 321 83.2
Thecc.07G180400 Theobroma cacao HOM05D003670 ORTHO05D004767 5.6e-157 557.8 316 83.9
FAN25G1710 Fragaria x ananassa HOM05D003670 ORTHO05D004767 7.3e-157 557.4 321 82.9
Glyma.08G167100 Glycine max HOM05D003670 ORTHO05D004767 9.6e-157 557.0 318 83.3
Psat1g013760 Pisum sativum HOM05D003670 ORTHO05D004767 1.3e-156 556.6 320 81.2
RcHm_v2.0_Chr5g0024611 Rosa chinensis HOM05D003670 ORTHO05D004767 1.3e-156 556.6 321 84.1
MBI02_g18168_MAGBIO Magnolia biondii HOM05D003670 ORTHO05D004767 2.1e-156 555.8 319 84.0
Aqoxy1G01484 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 4.8e-156 554.7 311 83.9
Sp5g34280 Schrenkiella parvula HOM05D003670 ORTHO05D004767 4.8e-156 554.7 323 81.7
CsaV3_3G018980 Cucumis sativus L. HOM05D003670 ORTHO05D004767 2.4e-155 552.4 319 81.2
Solyc02g078990.4 Solanum lycopersicum HOM05D003670 ORTHO05D004767 3.1e-155 552.0 318 82.1
Eucgr.F04458 Eucalyptus grandis HOM05D003670 ORTHO05D004767 4.0e-155 551.6 318 82.4
Sopen02g023800 Solanum pennellii HOM05D003670 ORTHO05D004767 5.3e-155 551.2 318 82.7
Phvul.005G050400 Phaseolus vulgaris HOM05D003670 ORTHO05D004767 9.0e-155 550.4 318 82.7
ATR0763G120 Amborella trichopoda HOM05D003670 ORTHO05D004767 1.5e-154 549.7 312 83.7
CARHR072860 Cardamine hirsuta HOM05D003670 ORTHO05D004767 2.0e-154 549.3 323 80.2
Thhalv10018699m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 2.0e-154 549.3 323 81.1
VMungo1080G1660 Vigna mungo HOM05D003670 ORTHO05D004767 2.6e-154 548.9 318 82.4
MSTRG.14566 Avicennia marina HOM05D003670 ORTHO05D004767 4.5e-154 548.1 318 81.8
Lalb_Chr25g0284691 Lupinus albus HOM05D003670 ORTHO05D004767 4.5e-154 548.1 319 82.1
AL2G39700 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 5.8e-154 547.7 323 79.3
CANSAT80G2697 Cannabis sativa HOM05D003670 ORTHO05D004767 5.8e-154 547.7 318 81.8
AT1G79230 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 1.9e-152 542.7 323 79.6
EL10Ac2g03264 Beta vulgaris HOM05D003670 ORTHO05D004767 3.2e-152 542.0 316 80.4
CARHR016930 Cardamine hirsuta HOM05D003670 ORTHO05D004767 3.2e-152 542.0 320 78.8
Potri.005G095300 Populus trichocarpa HOM05D003670 ORTHO05D004767 3.2e-152 542.0 307 83.7
Sabra07G0056700 Salix brachista HOM05D003670 ORTHO05D004767 3.2e-152 542.0 335 78.2
vmacro11699 Vaccinium macrocarpon HOM05D003670 ORTHO05D004767 3.2e-152 542.0 345 77.4
Aa31LG4G1790 Aethionema arabicum HOM05D003670 ORTHO05D004767 5.4e-152 541.2 321 80.4
BcaB02g07206 Brassica carinata HOM05D003670 ORTHO05D004767 7.1e-152 540.8 324 78.7
AUR62037644 Chenopodium quinoa HOM05D003670 ORTHO05D004767 1.6e-151 539.7 319 79.3
BcaC08g45368 Brassica carinata HOM05D003670 ORTHO05D004767 2.1e-151 539.3 325 79.1
C06p30000 Brassica napus HOM05D003670 ORTHO05D004767 2.1e-151 539.3 325 79.1
BolC6t38160H Brassica oleracea HOM05D003670 ORTHO05D004767 2.1e-151 539.3 325 79.1
Carub.0002s2610 Capsella rubella HOM05D003670 ORTHO05D004767 2.7e-151 538.9 323 78.6
A07p27230 Brassica napus HOM05D003670 ORTHO05D004767 6.0e-151 537.7 325 78.5
BraA07t30367Z Brassica rapa HOM05D003670 ORTHO05D004767 6.0e-151 537.7 325 78.5
AUR62039184 Chenopodium quinoa HOM05D003670 ORTHO05D004767 7.9e-151 537.3 319 78.7
unitig_578.g16333 Utricularia gibba HOM05D003670 ORTHO05D004767 1.0e-150 537.0 318 78.0
BraA07t31943Z Brassica rapa HOM05D003670 ORTHO05D004767 3.0e-150 535.4 323 78.0
A07p44350 Brassica napus HOM05D003670 ORTHO05D004767 3.9e-150 535.0 323 77.7
THA.LOC104812362 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 3.9e-150 535.0 320 78.1
Ah.10g033690 Amaranthus hybridus HOM05D003670 ORTHO05D004767 6.7e-150 534.3 336 75.6
Thhalv10007910m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 1.5e-149 533.1 320 78.1
THA.LOC104813608 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 1.3e-148 530.0 324 77.2
Carub.0001s1620 Capsella rubella HOM05D003670 ORTHO05D004767 2.1e-148 529.3 320 76.9
BcaB05g25180 Brassica carinata HOM05D003670 ORTHO05D004767 3.6e-148 528.5 317 80.1
BolC5t30186H Brassica oleracea HOM05D003670 ORTHO05D004767 4.8e-148 528.1 321 76.9
BcaC05g25571 Brassica carinata HOM05D003670 ORTHO05D004767 3.1e-147 525.4 321 76.9
C05p14650 Brassica napus HOM05D003670 ORTHO05D004767 4.0e-147 525.0 321 76.6
Cfa022976 Carpinus fangiana HOM05D003670 ORTHO05D004767 4.0e-147 525.0 318 80.2
Sed0012107 Sechium edule HOM05D003670 ORTHO05D004767 4.5e-146 521.5 319 77.1
Sabra05G0078800 Salix brachista HOM05D003670 ORTHO05D004767 5.8e-146 521.2 316 78.8
HPP92_013192 Vanilla planifolia HOM05D003670 ORTHO05D004767 3.8e-145 518.5 318 76.4
BraA06t24401Z Brassica rapa HOM05D003670 ORTHO05D004767 1.4e-144 516.5 321 76.6
Os12g0608600 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 1.4e-144 516.5 312 77.2
Zm00001eb031400 Zea mays HOM05D003670 ORTHO05D004767 3.2e-144 515.4 318 76.4
Oeu043724.2 Olea europaea HOM05D003670 ORTHO05D004767 7.1e-144 514.2 322 76.4
DCAR_019919 Daucus carota HOM05D003670 ORTHO05D004767 2.7e-143 512.3 318 78.9
BcaB02g06624 Brassica carinata HOM05D003670 ORTHO05D004767 4.6e-143 511.5 320 74.1
A06p12380 Brassica napus HOM05D003670 ORTHO05D004767 6.0e-143 511.1 321 74.8
AL1G28600 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 2.3e-142 509.2 320 74.4
SGA_v2.0_scaffold186G40197 Striga asiatica HOM05D003670 ORTHO05D004767 6.7e-142 507.7 304 77.0
Sp1g14610 Schrenkiella parvula HOM05D003670 ORTHO05D004767 1.6e-140 503.1 322 72.4
Aa31LG7G1000 Aethionema arabicum HOM05D003670 ORTHO05D004767 1.1e-139 500.4 322 73.0
Glyma.15G260300 Glycine max HOM05D003670 ORTHO05D004767 1.8e-139 499.6 287 82.9
MSTRG.7076 Avicennia marina HOM05D003670 ORTHO05D004767 4.0e-139 498.4 307 74.3
Hund20101 Selenicereus undatus HOM05D003670 ORTHO05D004767 4.0e-139 498.4 316 75.9
Sc06g0002800 Simmondsia chinensis HOM05D003670 ORTHO05D004767 4.5e-138 495.0 281 83.3
Duzib213G1009 Durio zibethinus HOM05D003670 ORTHO05D004767 5.8e-138 494.6 325 75.4
AT1G16460 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 3.8e-137 491.9 320 72.8
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea HOM05D003670 ORTHO05D004767 5.5e-136 488.0 280 82.9
ClCG05G009800 Citrullus lanatus HOM05D003670 ORTHO05D000003 1.2e-135 486.9 318 74.2
unitig_8.g4750 Utricularia gibba HOM05D003670 ORTHO05D004767 3.9e-134 481.9 314 73.9
SEGI_21826 Sequoiadendron giganteum HOM05D003670 ORTHO05D004767 3.7e-132 475.3 327 70.0
Nitab4.5_0000388g0140 Nicotiana tabacum HOM05D003670 ORTHO05D004767 6.3e-132 474.6 264 87.1
Lj2A15G76 Lonicera japonica HOM05D003670 ORTHO05D004767 9.0e-131 470.7 287 81.5
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea HOM05D003670 ORTHO05D004767 2.6e-130 469.2 280 80.7
DCAR_016837 Daucus carota HOM05D003670 ORTHO05D004767 4.5e-130 468.4 294 73.8
C06p53140 Brassica napus HOM05D003670 ORTHO05D004767 1.3e-124 450.3 257 80.9
BolC6t40330H Brassica oleracea HOM05D003670 ORTHO05D004767 1.3e-124 450.3 257 80.9
MELO3C019489.2 Cucumis melo HOM05D003670 ORTHO05D004767 8.2e-124 447.6 265 79.2
BcaC08g47490 Brassica carinata HOM05D003670 ORTHO05D004767 1.8e-123 446.4 331 67.7
QL04p088965 Quercus lobata HOM05D003670 ORTHO05D004767 8.5e-121 437.6 241 85.5
Os02g0167100 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 1.0e-118 430.6 292 65.8
SGA_v2.0_scaffold49G18190 Striga asiatica HOM05D003670 ORTHO05D004767 9.7e-117 424.1 265 78.1
Mapoly0058s0078 Marchantia polymorpha HOM05D003670 ORTHO05D004767 3.4e-114 415.6 318 60.1
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis HOM05D003670 ORTHO05D004767 2.9e-113 412.5 305 63.3
Zm00001eb207410 Zea mays HOM05D003670 ORTHO05D004767 5.5e-112 408.3 337 59.1
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 2.7e-111 406.0 246 82.9
Haze_07818 Corylus avellana HOM05D003670 ORTHO05D004767 3.9e-110 402.1 265 77.4
Pp3c9_17670 Physcomitrium patens HOM05D003670 ORTHO05D004767 2.2e-105 386.3 316 57.3
Rhsim05G0210500 Rhododendron simsii HOM05D003670 ORTHO05D004767 9.4e-104 380.9 224 83.0
HPP92_013209 Vanilla planifolia HOM05D003670 ORTHO05D004767 2.7e-103 379.4 311 61.7
CDE06G2006 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 3.6e-103 379.0 234 73.9
SMO119G0061 Selaginella moellendorffii HOM05D003670 ORTHO05D004767 3.6e-103 379.0 301 61.1
MD05G1228700 Malus domestica HOM05D003670 ORTHO05D004767 1.7e-92 343.6 201 82.1
FAN16G2550 Fragaria x ananassa HOM05D003670 ORTHO05D004767 7.0e-91 338.2 199 80.9
CDE02G0962 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 9.1e-91 337.8 234 68.8
Cpa.g.sc34.17 Carica papaya HOM05D003670 ORTHO05D004767 7.7e-90 334.7 226 73.9
Actinidia12766 Actinidia chinensis HOM05D003670 ORTHO05D004767 3.8e-89 332.4 175 92.6
RcHm_v2.0_Chr5g0024731 Rosa chinensis HOM05D003670 ORTHO05D004767 9.8e-77 291.2 196 76.5
A02p22680 Brassica napus HOM05D003670 ORTHO05D004767 6.6e-73 278.5 349 46.4
C02p36310 Brassica napus HOM05D003670 ORTHO05D004767 6.8e-70 268.5 219 64.4
CBR_g17038 Chara braunii HOM05D003670 ORTHO05D004767 1.2e-69 267.7 358 41.6
MCO09G588 Micromonas commoda HOM05D003670 ORTHO05D004767 1.9e-67 260.4 299 47.5
PRCOL_00006295 Prasinoderma coloniale HOM05D003670 ORTHO05D004767 3.2e-67 259.6 309 45.3
Cre13.g607050 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D004767 1.7e-65 253.8 323 43.0
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 4.4e-53 212.6 153 71.2
Aqoxy1G03000 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 1.7e-52 210.7 115 82.6
Cfa026738 Carpinus fangiana HOM05D003670 ORTHO05D004767 6.0e-42 175.6 289 39.1
MD05G1228600 Malus domestica HOM05D003670 ORTHO05D004767 1.3e-41 174.5 122 73.8
C03p82980 Brassica napus HOM05D003670 ORTHO05D004767 3.4e-37 159.8 94 85.1
BcaC01g00674 Brassica carinata HOM05D003670 ORTHO05D004767 5.8e-37 159.1 92 85.9
BolC1t01654H Brassica oleracea HOM05D003670 ORTHO05D004767 5.8e-37 159.1 131 65.6
C01p17180 Brassica napus HOM05D003670 ORTHO05D004767 4.9e-36 156.0 131 64.9
BcaC04g18607 Brassica carinata HOM05D003670 ORTHO05D004767 6.4e-36 155.6 92 83.7
BolC9t58925H Brassica oleracea HOM05D003670 ORTHO05D004767 4.2e-35 152.9 131 63.4
CAN.G891.1 Capsicum annuum HOM05D003670 ORTHO05D004767 4.2e-35 152.9 94 80.9
Oeu010650.2 Olea europaea HOM05D003670 ORTHO05D004767 7.4e-32 142.1 97 77.3
Lsat_1_v5_gn_4_93521 Lactuca sativa HOM05D003670 ORTHO05D004767 3.4e-29 133.3 66 92.4
Cpa.g.sc34.16 Carica papaya HOM05D003670 ORTHO05D004767 2.4e-27 127.1 76 77.6
Oeu034061.1 Olea europaea HOM05D003670 ORTHO05D020012 6.0e-26 122.5 74 77.0
Solyc06g009850.3 Solanum lycopersicum HOM05D003670 ORTHO05D014971 3.3e-24 116.7 116 56.9
BolC7t42971H Brassica oleracea HOM05D003670 ORTHO05D004767 1.3e-23 114.8 133 51.1
BcaC06g34801 Brassica carinata HOM05D003670 ORTHO05D004767 2.1e-23 114.0 92 68.5
Mapoly0032s0014 Marchantia polymorpha HOM05D003670 ORTHO05D031137 2.1e-23 114.0 320 28.4
CDE06G0877 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 4.0e-22 109.8 63 76.2
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 1.1e-16 91.7 51 80.4
BcaC03g15876 Brassica carinata HOM05D003670 ORTHO05D020012 4.3e-16 89.7 61 68.9
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis HOM05D003670 ORTHO05D031137 2.2e-15 87.4 244 29.9
Sopen06g004510 Solanum pennellii HOM05D003670 ORTHO05D014971 2.6e-13 80.5 47 80.9
BcaC02g07679 Brassica carinata HOM05D003670 ORTHO05D014971 3.8e-12 76.6 41 82.9
Solyc06g009860.1 Solanum lycopersicum HOM05D003670 ORTHO05D020012 5.5e-11 72.8 47 66.0
C06p40160 Brassica napus HOM05D003670 ORTHO05D020012 1.4e-09 68.2 42 71.4
BolC6t39098H Brassica oleracea HOM05D003670 ORTHO05D020012 1.4e-09 68.2 42 71.4
QL04p088979 Quercus lobata HOM05D003670 ORTHO05D004767 8.8e-09 65.5 40 80.0
Hma1.2p1_1039F.1_g250810 Hydrangea macrophylla HOM05D001854 ORTHO05D001800 2.5e-08 63.9 39 79.5
Lsat_1_v5_gn_8_160501 Lactuca sativa HOM05D003670 ORTHO05D002209 3.3e-08 63.5 33 90.9
Cre01.g008891 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D031137 2.4e-06 57.4 58 41.4


User provided reference genes

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