Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G3505 Erigeron canadensis HOM05D004327 ORTHO05D005032 3.3e-196 688.3 382 100.0
Hma1.2p1_1025F.1_g249340 Hydrangea macrophylla HOM05D004327 ORTHO05D005032 5.6e-156 554.7 370 81.9
CSS0007595 Camellia sinensis var. sinensis HOM05D004327 ORTHO05D005032 2.1e-155 552.7 370 83.2
HanXRQChr11g0322421 Helianthus annuus HOM05D004327 ORTHO05D005032 4.8e-155 551.6 378 82.5
ECA240G0157 Erigeron canadensis HOM05D004327 ORTHO05D005032 5.3e-154 548.1 363 82.6
Prupe.1G085300 Prunus persica HOM05D004327 ORTHO05D005032 9.3e-151 537.3 370 78.1
QL02p097831 Quercus lobata HOM05D004327 ORTHO05D005032 3.5e-150 535.4 358 82.7
Dinv42719 Davidia involucrata HOM05D004327 ORTHO05D005032 1.8e-149 533.1 370 78.4
GSVIVG01029211001 Vitis vinifera HOM05D004327 ORTHO05D005032 8.7e-149 530.8 358 82.7
ClCG11G012140 Citrullus lanatus HOM05D004327 ORTHO05D005032 5.6e-148 528.1 370 76.2
DCAR_017971 Daucus carota HOM05D004327 ORTHO05D005032 2.1e-147 526.2 356 79.5
Cpa.g.sc233.7 Carica papaya HOM05D004327 ORTHO05D005032 6.2e-147 524.6 361 79.5
Atru.chr7.613 Acer truncatum HOM05D004327 ORTHO05D005032 1.4e-146 523.5 360 79.7
Sed0007507 Sechium edule HOM05D004327 ORTHO05D005032 4.0e-146 521.9 374 74.3
Lsat_1_v5_gn_7_54620 Lactuca sativa HOM05D004327 ORTHO05D005032 5.3e-146 521.5 351 83.8
Potri.018G092000 Populus trichocarpa HOM05D004327 ORTHO05D005032 2.0e-145 519.6 358 81.6
CsaV3_2G008420 Cucumis sativus L. HOM05D004327 ORTHO05D005032 2.6e-145 519.2 358 77.1
Dinv43382 Davidia involucrata HOM05D004327 ORTHO05D005032 5.8e-145 518.1 358 78.5
CANSAT11G1121 Cannabis sativa HOM05D004327 ORTHO05D005032 7.6e-145 517.7 369 75.9
MD13G1253000 Malus domestica HOM05D004327 ORTHO05D005032 8.4e-144 514.2 362 76.5
Manes.14G154300 Manihot esculenta HOM05D004327 ORTHO05D005032 8.4e-144 514.2 357 78.7
RcHm_v2.0_Chr4g0402371 Rosa chinensis HOM05D004327 ORTHO05D005032 8.4e-144 514.2 359 78.8
MD16G1257500 Malus domestica HOM05D004327 ORTHO05D005032 1.4e-143 513.5 358 77.4
Ciclev10008675m.g Citrus clementina HOM05D004327 ORTHO05D005032 5.5e-143 511.5 358 79.9
TPR.G5449 Trifolium pratense HOM05D004327 ORTHO05D005032 7.1e-143 511.1 357 80.1
Lj4g0017259 Lotus japonicus HOM05D004327 ORTHO05D005032 1.6e-142 510.0 357 77.6
TAR343G0001 Trochodendron aralioides HOM05D004327 ORTHO05D005032 1.6e-142 510.0 370 74.9
VMungo1215G1888 Vigna mungo HOM05D004327 ORTHO05D005032 1.6e-142 510.0 358 76.8
Thecc.09G176900 Theobroma cacao HOM05D004327 ORTHO05D005032 4.6e-142 508.4 359 79.4
Nn8g40460 Nelumbo nucifera HOM05D004327 ORTHO05D005032 7.9e-142 507.7 370 77.3
MSTRG.26218 Avicennia marina HOM05D004327 ORTHO05D005032 3.0e-141 505.8 362 76.0
Phvul.003G145300 Phaseolus vulgaris HOM05D004327 ORTHO05D005032 3.0e-141 505.8 358 75.7
Migut.J01485 Erythranthe guttata HOM05D004327 ORTHO05D005032 5.1e-141 505.0 356 76.4
FAN22G1646 Fragaria x ananassa HOM05D004327 ORTHO05D005032 6.7e-141 504.6 371 76.3
Glyma.13G096600 Glycine max HOM05D004327 ORTHO05D005032 6.7e-141 504.6 369 74.0
CiPaw.07G192500 Carya illinoinensis HOM05D004327 ORTHO05D005032 8.7e-141 504.2 359 76.6
Glyma.17G062900 Glycine max HOM05D004327 ORTHO05D005032 8.7e-141 504.2 357 75.9
vmacro06012 Vaccinium macrocarpon HOM05D004327 ORTHO05D005032 8.7e-141 504.2 360 76.4
Rhsim03G0264600 Rhododendron simsii HOM05D004327 ORTHO05D005032 1.5e-140 503.4 361 78.9
Cc06_g13210 Coffea canephora HOM05D004327 ORTHO05D005032 2.5e-140 502.7 373 76.4
Medtr4g127970 Medicago truncatula HOM05D004327 ORTHO05D005032 3.3e-140 502.3 364 75.3
FvH4_4g08170 Fragaria vesca HOM05D004327 ORTHO05D005032 7.4e-140 501.1 371 75.7
Ca_21229_v3 Cicer arietinum L. HOM05D004327 ORTHO05D005032 2.1e-139 499.6 353 79.0
Eucgr.C00153 Eucalyptus grandis HOM05D004327 ORTHO05D005032 2.8e-139 499.2 361 75.3
Gohir.D08G093800 Gossypium hirsutum HOM05D004327 ORTHO05D005032 2.8e-139 499.2 352 80.1
Lalb_Chr07g0180501 Lupinus albus HOM05D004327 ORTHO05D005032 4.8e-139 498.4 357 75.4
arahy.Tifrunner.gnm1.ann1.UF0NDT Arachis hypogaea HOM05D004327 ORTHO05D005032 6.2e-139 498.0 359 76.3
Gohir.A08G084200 Gossypium hirsutum HOM05D004327 ORTHO05D005032 8.2e-139 497.7 352 79.8
Migut.K00240 Erythranthe guttata HOM05D004327 ORTHO05D005032 1.1e-138 497.3 378 72.8
Solyc07g019530.3 Solanum lycopersicum HOM05D004327 ORTHO05D005032 1.8e-138 496.5 373 75.9
Sopen07g008040 Solanum pennellii HOM05D004327 ORTHO05D005032 1.8e-138 496.5 373 75.9
arahy.Tifrunner.gnm1.ann1.IHC8NS Arachis hypogaea HOM05D004327 ORTHO05D005032 5.3e-138 495.0 359 76.0
COL.COLO4_37716 Corchorus olitorius HOM05D004327 ORTHO05D005032 9.0e-138 494.2 360 78.3
Gorai.004G099500 Gossypium raimondii HOM05D004327 ORTHO05D005032 2.6e-137 492.7 368 77.2
MSTRG.6222 Avicennia marina HOM05D004327 ORTHO05D005032 1.0e-136 490.7 365 75.1
PSO063G6085 Papaver somniferum HOM05D004327 ORTHO05D005032 1.0e-136 490.7 367 74.7
Peaxi162Scf00231g00726 Petunia axillaris HOM05D004327 ORTHO05D005032 5.0e-136 488.4 374 74.9
SGA_v2.0_scaffold66G22446 Striga asiatica HOM05D004327 ORTHO05D005032 1.4e-135 486.9 357 77.9
Duzib150G0132 Durio zibethinus HOM05D004327 ORTHO05D005032 1.9e-135 486.5 357 77.0
Actinidia17317 Actinidia chinensis HOM05D004327 ORTHO05D005032 3.2e-135 485.7 372 75.8
Duzib168G0099 Durio zibethinus HOM05D004327 ORTHO05D005032 2.7e-134 482.6 363 75.8
Psat4g169000 Pisum sativum HOM05D004327 ORTHO05D005032 1.0e-133 480.7 342 75.7
Sc14g0001280 Simmondsia chinensis HOM05D004327 ORTHO05D005032 1.3e-133 480.3 353 76.5
PSO170G3199 Papaver somniferum HOM05D004327 ORTHO05D005032 1.8e-133 479.9 367 73.8
Sp6g19130 Schrenkiella parvula HOM05D004327 ORTHO05D005032 8.7e-133 477.6 367 74.7
AL8G33390 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 1.9e-132 476.5 359 72.7
CARHR271210 Cardamine hirsuta HOM05D004327 ORTHO05D005032 4.3e-132 475.3 358 75.7
Carub.0008s1793 Capsella rubella HOM05D004327 ORTHO05D005032 9.7e-132 474.2 358 74.9
Sabra18G0079100 Salix brachista HOM05D004327 ORTHO05D005032 1.6e-131 473.4 360 75.6
ATR0580G352 Amborella trichopoda HOM05D004327 ORTHO05D005032 2.2e-131 473.0 365 73.2
CAN.G210.1 Capsicum annuum HOM05D004327 ORTHO05D005032 2.8e-131 472.6 372 73.7
Thhalv10013843m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 3.7e-131 472.2 358 75.1
BraA03t10592Z Brassica rapa HOM05D004327 ORTHO05D005032 4.8e-131 471.9 366 73.5
BolC3t13942H Brassica oleracea HOM05D004327 ORTHO05D005032 1.1e-130 470.7 366 73.2
THA.LOC104811786 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 1.8e-130 469.9 360 75.0
BcaB01g04457 Brassica carinata HOM05D004327 ORTHO05D005032 3.1e-130 469.2 364 72.8
Hund09030 Selenicereus undatus HOM05D004327 ORTHO05D005032 1.2e-129 467.2 358 74.3
A03p12840 Brassica napus HOM05D004327 ORTHO05D005032 3.4e-129 465.7 342 76.3
C03p15000 Brassica napus HOM05D004327 ORTHO05D005032 3.4e-129 465.7 343 76.1
PGR142G4100 Punica granatum HOM05D004327 ORTHO05D005032 4.5e-129 465.3 358 71.8
HPP92_019412 Vanilla planifolia HOM05D004327 ORTHO05D005032 5.9e-129 464.9 364 73.1
EL10Ac8g18287 Beta vulgaris HOM05D004327 ORTHO05D005032 7.7e-129 464.5 352 75.0
AT5G57410 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 1.0e-128 464.2 367 70.6
CDE04G3746 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 3.8e-128 462.2 359 72.7
MBI14_g17374_MAGBIO Magnolia biondii HOM05D004327 ORTHO05D005032 8.5e-128 461.1 370 71.1
BcaC01g06496 Brassica carinata HOM05D004327 ORTHO05D005032 1.9e-127 459.9 361 73.4
THA.LOC104803493 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 2.5e-127 459.5 359 73.8
Aa31LG3G13300 Aethionema arabicum HOM05D004327 ORTHO05D005032 7.2e-127 458.0 400 67.5
SalBow6G1961 Salvia bowleyana HOM05D004327 ORTHO05D005032 7.9e-126 454.5 363 71.3
THA.LOC104813521 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 1.0e-125 454.1 344 75.9
CARHR109440 Cardamine hirsuta HOM05D004327 ORTHO05D005032 1.4e-125 453.8 367 67.8
AUR62033220 Chenopodium quinoa HOM05D004327 ORTHO05D005032 6.7e-125 451.4 367 71.1
Dinv41244 Davidia involucrata HOM05D004327 ORTHO05D005032 1.1e-124 450.7 310 82.6
unitig_0.g2679 Utricularia gibba HOM05D004327 ORTHO05D005032 1.1e-124 450.7 379 70.2
Aqoxy7G03046 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 3.3e-124 449.1 342 74.9
AL3G53050 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 4.3e-124 448.7 355 69.0
BolC9t54328H Brassica oleracea HOM05D004327 ORTHO05D005032 8.2e-123 444.5 344 69.8
CDE07G0842 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 7.7e-121 438.0 345 71.6
A09p12090 Brassica napus HOM05D004327 ORTHO05D005032 1.3e-120 437.2 386 66.1
Os08g0242900 Oryza sativa ssp. japonica HOM05D004327 ORTHO05D005032 2.2e-120 436.4 354 71.8
Sp3g32340 Schrenkiella parvula HOM05D004327 ORTHO05D005032 2.2e-120 436.4 359 68.5
Zm00001eb178290 Zea mays HOM05D004327 ORTHO05D005032 2.2e-120 436.4 379 68.9
BraA09t36853Z Brassica rapa HOM05D004327 ORTHO05D005032 2.9e-120 436.0 344 70.9
BcaC04g22882 Brassica carinata HOM05D004327 ORTHO05D005032 5.0e-120 435.3 344 71.5
C09p14270 Brassica napus HOM05D004327 ORTHO05D005032 5.0e-120 435.3 344 71.5
Carub.0003s3311 Capsella rubella HOM05D004327 ORTHO05D005032 5.0e-120 435.3 361 68.7
BcaB07g31641 Brassica carinata HOM05D004327 ORTHO05D005032 4.2e-119 432.2 377 67.9
Thhalv10022742m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 2.7e-118 429.5 359 66.9
SHI02909 Sapria himalayana HOM05D004327 ORTHO05D005032 5.1e-117 425.2 362 68.2
Aa31LG8G15970 Aethionema arabicum HOM05D004327 ORTHO05D005032 1.5e-116 423.7 370 66.5
Sed0007415 Sechium edule HOM05D004327 ORTHO05D005032 1.5e-116 423.7 370 63.5
AUR62021302 Chenopodium quinoa HOM05D004327 ORTHO05D005032 1.7e-115 420.2 349 69.9
Lalb_Chr13g0300201 Lupinus albus HOM05D004327 ORTHO05D005032 2.4e-114 416.4 348 67.5
CiPaw.08G036000 Carya illinoinensis HOM05D004327 ORTHO05D005032 3.1e-114 416.0 358 64.8
AagrBONN_evm.TU.Sc2ySwM_117.785 Anthoceros agrestis HOM05D004327 ORTHO05D005032 1.5e-113 413.7 375 61.9
SMO352G0043 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 5.9e-113 411.8 331 65.6
MELO3C004022.2 Cucumis melo HOM05D004327 ORTHO05D005032 1.1e-108 397.5 303 73.6
Pp3c12_10100 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.8e-107 392.9 344 61.0
Lj9A24G29 Lonicera japonica HOM05D004327 ORTHO05D005032 1.1e-106 391.0 268 78.4
FAN17G0468 Fragaria x ananassa HOM05D004327 ORTHO05D005032 1.8e-106 390.2 278 77.3
Nitab4.5_0004572g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 2.4e-106 389.8 374 64.4
Pp3c5_23860 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.6e-105 386.3 349 59.6
Nitab4.5_0005945g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 1.3e-104 384.0 373 63.5
Actinidia38633 Actinidia chinensis HOM05D004327 ORTHO05D005032 5.0e-104 382.1 285 73.3
Pp3c3_22200 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.2e-100 370.9 353 58.4
Actinidia27011 Actinidia chinensis HOM05D004327 ORTHO05D005032 1.3e-99 367.5 302 73.2
TAR636G3612 Trochodendron aralioides HOM05D000809 ORTHO05D001196 8.3e-99 364.8 284 76.1
Pp3c10_16450 Physcomitrium patens HOM05D004327 ORTHO05D005032 9.1e-98 361.3 298 62.8
SMO137G0257 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 2.9e-96 356.3 331 58.3
Pp3c16_10790 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.5e-95 354.0 355 56.1
Mapoly0023s0050 Marchantia polymorpha HOM05D004327 ORTHO05D005032 2.1e-94 350.1 341 56.9
Haze_22092 Corylus avellana HOM05D004327 ORTHO05D005032 3.0e-93 346.3 268 71.6
CBR_g34541 Chara braunii HOM05D004327 ORTHO05D005032 9.8e-92 341.3 344 56.1
CBR_g4121 Chara braunii HOM05D004327 ORTHO05D005032 3.3e-87 326.2 347 56.5
AT2G18876 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 3.6e-86 322.8 270 67.0
BcaB01g04461 Brassica carinata HOM05D004327 ORTHO05D005032 9.8e-84 314.7 297 64.3
Duzib170G0255 Durio zibethinus HOM05D004327 ORTHO05D005032 2.0e-81 307.0 218 78.0
Actinidia02748 Actinidia chinensis HOM05D004327 ORTHO05D005032 2.8e-78 296.6 224 74.6
BcaC01g06490 Brassica carinata HOM05D004327 ORTHO05D005032 5.4e-58 229.2 182 69.2
Aqoxy4G01695 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 1.4e-45 188.0 125 80.8
BcaC01g06489 Brassica carinata HOM05D004327 ORTHO05D005032 1.7e-40 171.0 135 74.8
FAN17G0800 Fragaria x ananassa HOM05D004327 ORTHO05D005032 8.1e-38 162.2 130 68.5
Haze_22093 Corylus avellana HOM05D004327 ORTHO05D005032 3.4e-36 156.8 131 67.9
Oeu042171.1 Olea europaea HOM05D004327 ORTHO05D005032 3.8e-35 153.3 130 68.5
HanXRQChr09g0245491 Helianthus annuus HOM05D000502 ORTHO05D005032 3.4e-28 130.2 79 79.7
HanXRQChr08g0229701 Helianthus annuus HOM05D000502 ORTHO05D005032 5.8e-28 129.4 70 87.1
Lj9A25T20 Lonicera japonica HOM05D004327 ORTHO05D005032 2.9e-27 127.1 97 70.1
HanXRQChr13g0404041 Helianthus annuus HOM05D000502 ORTHO05D005032 8.4e-27 125.6 70 85.7
SEGI_01506 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 3.3e-23 113.6 105 61.0
Pp3c26_7180 Physcomitrium patens HOM05D004327 ORTHO05D005032 3.7e-22 110.2 104 49.0
SEGI_38031 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 4.1e-21 106.7 81 71.6
Aqoxy7G03035 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 1.9e-15 87.8 130 45.4
BcaB05g22345 Brassica carinata HOM05D004327 ORTHO05D005032 2.8e-14 84.0 93 52.7
CiPaw.01G111100 Carya illinoinensis HOM05D002292 ORTHO05D005032 9.0e-13 79.0 58 77.6
Pp3c25_9090 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.0e-12 77.8 97 52.6
COL.COLO4_28287 Corchorus olitorius HOM05D004327 ORTHO05D005032 2.2e-11 74.3 54 79.6
Glyma.09G140000 Glycine max HOM05D004327 ORTHO05D005032 2.9e-11 73.9 74 52.7
BraA02t05921Z Brassica rapa HOM05D004327 ORTHO05D005032 6.5e-11 72.8 81 53.1
BolC9t54329H Brassica oleracea HOM05D004327 ORTHO05D005032 1.2e-09 68.6 57 68.4
Oeu003512.1 Olea europaea HOM05D004327 ORTHO05D005032 6.1e-09 66.2 41 80.5
MCO09G810 Micromonas commoda HOM05D004327 ORTHO05D005032 2.0e-07 61.2 164 28.0
PRCOL_00002192 Prasinoderma coloniale HOM05D004327 ORTHO05D005032 5.7e-07 59.7 251 25.9
C02p14250 Brassica napus HOM05D004327 ORTHO05D032179 9.7e-07 58.9 132 37.9


User provided reference genes

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