Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G3492 Erigeron canadensis HOM05D004171 ORTHO05D004983 3.3e-155 551.6 264 100.0
Lsat_1_v5_gn_7_105981 Lactuca sativa HOM05D004171 ORTHO05D004983 5.1e-116 421.4 278 71.6
HanXRQChr02g0031371 Helianthus annuus HOM05D004171 ORTHO05D004983 7.7e-112 407.5 272 70.2
TAR629G3225 Trochodendron aralioides HOM05D004171 ORTHO05D004983 1.6e-96 356.7 273 64.5
Peaxi162Scf01216g00047 Petunia axillaris HOM05D004171 ORTHO05D004983 2.7e-96 355.9 268 63.8
TAR627G1073 Trochodendron aralioides HOM05D004171 ORTHO05D004983 4.5e-96 355.1 273 62.3
Dinv22359 Davidia involucrata HOM05D004171 ORTHO05D004983 5.9e-96 354.8 271 63.8
Dinv08350 Davidia involucrata HOM05D004171 ORTHO05D004983 1.0e-95 354.0 245 68.6
Nitab4.5_0000297g0160 Nicotiana tabacum HOM05D004171 ORTHO05D004983 1.0e-95 354.0 275 63.3
Sabra11G0111100 Salix brachista HOM05D004171 ORTHO05D004983 1.3e-95 353.6 273 62.3
Oeu006766.1 Olea europaea HOM05D004171 ORTHO05D004983 3.8e-95 352.1 272 64.0
Potri.011G126300 Populus trichocarpa HOM05D004171 ORTHO05D004983 6.5e-95 351.3 273 61.2
PGSC0003DMG400019283 Solanum tuberosum HOM05D004171 ORTHO05D004983 6.5e-95 351.3 277 62.1
Ah.04g165380 Amaranthus hybridus HOM05D004171 ORTHO05D004983 1.9e-94 349.7 274 61.3
Nitab4.5_0009110g0010 Nicotiana tabacum HOM05D004171 ORTHO05D004983 1.9e-94 349.7 275 62.5
Ciclev10009152m.g Citrus clementina HOM05D004171 ORTHO05D004983 3.2e-94 349.0 278 61.5
SalBow7G4117 Salvia bowleyana HOM05D004171 ORTHO05D004983 3.2e-94 349.0 264 61.7
Hma1.2p1_1176F.1_g264170 Hydrangea macrophylla HOM05D004171 ORTHO05D004983 4.2e-94 348.6 275 62.9
Cpa.g.sc12.36 Carica papaya HOM05D004171 ORTHO05D004983 7.2e-94 347.8 271 61.6
Actinidia05147 Actinidia chinensis HOM05D004171 ORTHO05D004983 9.4e-94 347.4 276 61.2
Solyc07g063620.3 Solanum lycopersicum HOM05D004171 ORTHO05D004983 9.4e-94 347.4 277 61.0
MSTRG.12927 Avicennia marina HOM05D004171 ORTHO05D004983 1.2e-93 347.1 269 61.0
Sopen07g031800 Solanum pennellii HOM05D004171 ORTHO05D004983 1.6e-93 346.7 279 60.9
COL.COLO4_09488 Corchorus olitorius HOM05D004171 ORTHO05D004983 8.0e-93 344.4 276 61.2
Phvul.011G138400 Phaseolus vulgaris HOM05D004171 ORTHO05D004983 1.0e-92 344.0 250 65.6
CiPaw.11G177500 Carya illinoinensis HOM05D004171 ORTHO05D004983 2.3e-92 342.8 274 60.6
AUR62015590 Chenopodium quinoa HOM05D004171 ORTHO05D004983 3.0e-92 342.4 274 59.9
ClCG11G018550 Citrullus lanatus HOM05D004171 ORTHO05D004983 3.0e-92 342.4 275 60.4
Cc05_g12750 Coffea canephora HOM05D004171 ORTHO05D004983 3.0e-92 342.4 273 61.2
Aqoxy1G02716 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 4.0e-92 342.0 278 61.5
arahy.Tifrunner.gnm1.ann1.SXKR4Z Arachis hypogaea HOM05D004171 ORTHO05D004983 4.0e-92 342.0 272 61.4
Actinidia09971 Actinidia chinensis HOM05D004171 ORTHO05D004983 8.8e-92 340.9 272 59.9
AUR62029303 Chenopodium quinoa HOM05D004171 ORTHO05D004983 1.5e-91 340.1 274 59.5
Duzib170G1088 Durio zibethinus HOM05D004171 ORTHO05D004983 1.5e-91 340.1 277 59.2
VMungo1127G0586 Vigna mungo HOM05D004171 ORTHO05D004983 2.0e-91 339.7 276 60.1
Lj3g0003583 Lotus japonicus HOM05D004171 ORTHO05D004983 2.6e-91 339.3 235 67.2
CSS0009250 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 4.4e-91 338.6 274 59.1
Glyma.12G134300 Glycine max HOM05D004171 ORTHO05D004983 9.8e-91 337.4 236 65.7
Duzib213G0518 Durio zibethinus HOM05D004171 ORTHO05D004983 1.3e-90 337.0 275 59.3
Gohir.A04G025600 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.3e-90 337.0 272 60.7
arahy.Tifrunner.gnm1.ann1.EUN1K4 Arachis hypogaea HOM05D004171 ORTHO05D004983 1.7e-90 336.7 235 67.2
CsaV3_3G044320 Cucumis sativus L. HOM05D004171 ORTHO05D004983 1.7e-90 336.7 277 58.5
Manes.15G082500 Manihot esculenta HOM05D004171 ORTHO05D004983 1.7e-90 336.7 279 58.8
Gohir.D05G362300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 2.2e-90 336.3 272 60.7
Gorai.009G430400 Gossypium raimondii HOM05D004171 ORTHO05D004983 2.2e-90 336.3 272 60.7
Glyma.12G218800 Glycine max HOM05D004171 ORTHO05D004983 2.8e-90 335.9 276 58.7
Migut.H01900 Erythranthe guttata HOM05D004171 ORTHO05D004983 4.8e-90 335.1 236 65.3
Thecc.07G070400 Theobroma cacao HOM05D004171 ORTHO05D004983 4.8e-90 335.1 279 58.8
RcHm_v2.0_Chr5g0036121 Rosa chinensis HOM05D004171 ORTHO05D004983 8.3e-90 334.3 277 58.8
MELO3C018184.2 Cucumis melo HOM05D004171 ORTHO05D004983 1.1e-89 334.0 277 58.5
CAN.G162.108 Capsicum annuum HOM05D004171 ORTHO05D004983 1.4e-89 333.6 277 58.8
Duzib268G0239 Durio zibethinus HOM05D004171 ORTHO05D004983 1.4e-89 333.6 273 59.3
Atru.chr2.2929 Acer truncatum HOM05D004171 ORTHO05D004983 1.8e-89 333.2 277 58.5
Lalb_Chr01g0017051 Lupinus albus HOM05D004171 ORTHO05D004983 1.8e-89 333.2 266 59.4
PGR031G0147 Punica granatum HOM05D004171 ORTHO05D004983 1.8e-89 333.2 278 59.4
Hund23371 Selenicereus undatus HOM05D004171 ORTHO05D004983 1.8e-89 333.2 277 57.8
SGA_v2.0_scaffold9G04958 Striga asiatica HOM05D004171 ORTHO05D004983 2.4e-89 332.8 270 59.6
Cfa020499 Carpinus fangiana HOM05D004171 ORTHO05D004983 3.1e-89 332.4 274 60.6
PSO675G0635 Papaver somniferum HOM05D004171 ORTHO05D004983 4.1e-89 332.0 268 59.3
arahy.Tifrunner.gnm1.ann1.H2QIWP Arachis hypogaea HOM05D004171 ORTHO05D004983 5.4e-89 331.6 260 59.6
arahy.Tifrunner.gnm1.ann1.UD3S3B Arachis hypogaea HOM05D004171 ORTHO05D004983 5.4e-89 331.6 260 59.6
Lj1A854T34 Lonicera japonica HOM05D004171 ORTHO05D004983 5.4e-89 331.6 270 60.4
Manes.03G117000 Manihot esculenta HOM05D004171 ORTHO05D004983 5.4e-89 331.6 260 61.2
MSTRG.14383 Avicennia marina HOM05D004171 ORTHO05D004983 1.2e-88 330.5 270 59.3
CSS0026220 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 2.0e-88 329.7 267 57.7
PSO541G5656 Papaver somniferum HOM05D004171 ORTHO05D004983 2.0e-88 329.7 268 59.7
Prupe.4G191500 Prunus persica HOM05D004171 ORTHO05D004983 2.0e-88 329.7 274 60.2
Eucgr.F01074 Eucalyptus grandis HOM05D004171 ORTHO05D004983 2.7e-88 329.3 270 59.6
Rhsim06G0192400 Rhododendron simsii HOM05D004171 ORTHO05D004983 4.5e-88 328.6 270 59.6
Haze_09543 Corylus avellana HOM05D004171 ORTHO05D004983 5.9e-88 328.2 275 58.9
THA.LOC104799905 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 7.7e-88 327.8 282 56.4
EL10Ac4g08047 Beta vulgaris HOM05D004171 ORTHO05D004983 1.3e-87 327.0 303 55.8
Gohir.A13G143300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 2.9e-87 325.9 275 58.2
Gohir.D13G148000 Gossypium hirsutum HOM05D004171 ORTHO05D004983 3.8e-87 325.5 274 57.7
Gorai.013G165800 Gossypium raimondii HOM05D004171 ORTHO05D004983 3.8e-87 325.5 274 57.7
vmacro11810 Vaccinium macrocarpon HOM05D004171 ORTHO05D004983 3.8e-87 325.5 231 65.8
GSVIVG01014444001 Vitis vinifera HOM05D004171 ORTHO05D004983 3.8e-87 325.5 274 57.7
CiPaw.12G123300 Carya illinoinensis HOM05D004171 ORTHO05D004983 5.0e-87 325.1 271 59.0
Sed0003677 Sechium edule HOM05D004171 ORTHO05D004983 5.0e-87 325.1 271 58.3
CARHR235000 Cardamine hirsuta HOM05D004171 ORTHO05D004983 6.5e-87 324.7 279 54.5
MD11G1235500 Malus domestica HOM05D004171 ORTHO05D004983 6.5e-87 324.7 274 57.7
Lalb_Chr19g0134521 Lupinus albus HOM05D004171 ORTHO05D004983 8.5e-87 324.3 270 59.6
PGR083G0998 Punica granatum HOM05D004171 ORTHO05D004983 8.5e-87 324.3 267 57.7
DCAR_009989 Daucus carota HOM05D004171 ORTHO05D004983 1.1e-86 323.9 236 64.8
Thhalv10025946m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 1.5e-86 323.6 281 54.8
VMungo1080G1500 Vigna mungo HOM05D004171 ORTHO05D004983 1.5e-86 323.6 272 57.4
AL7G25450 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 1.9e-86 323.2 280 55.4
MBI02_g13230_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 1.9e-86 323.2 275 56.4
MD03G1217700 Malus domestica HOM05D004171 ORTHO05D004983 1.9e-86 323.2 274 58.4
AT4G27350 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 2.5e-86 322.8 280 54.6
BcaC09g50581 Brassica carinata HOM05D004171 ORTHO05D004983 2.5e-86 322.8 284 55.3
BolC1t02294H Brassica oleracea HOM05D004171 ORTHO05D004983 2.5e-86 322.8 284 55.3
BcaNung03036 Brassica carinata HOM05D004171 ORTHO05D004983 4.2e-86 322.0 285 54.0
BcaNung05201 Brassica carinata HOM05D004171 ORTHO05D004983 4.2e-86 322.0 285 54.0
MBI18_g19831_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 5.5e-86 321.6 269 56.9
Psat4g140880 Pisum sativum HOM05D004171 ORTHO05D004983 5.5e-86 321.6 271 58.7
A01p18530 Brassica napus HOM05D004171 ORTHO05D004983 7.2e-86 321.2 285 55.1
BraA01t01802Z Brassica rapa HOM05D004171 ORTHO05D004983 7.2e-86 321.2 285 55.1
QL08p017518 Quercus lobata HOM05D004171 ORTHO05D004983 7.2e-86 321.2 237 66.2
Eucgr.F03360 Eucalyptus grandis HOM05D004171 ORTHO05D004983 9.4e-86 320.9 237 64.6
FvH4_3g21110 Fragaria vesca HOM05D004171 ORTHO05D004983 9.4e-86 320.9 278 57.2
C01p23480 Brassica napus HOM05D004171 ORTHO05D004983 1.6e-85 320.1 284 54.6
Sp7g25280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 1.6e-85 320.1 282 55.0
TWI38G2120 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 1.6e-85 320.1 235 63.0
THA.LOC104813397 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 2.7e-85 319.3 287 55.1
BcaNung05200 Brassica carinata HOM05D004171 ORTHO05D004983 3.6e-85 318.9 284 53.9
Medtr8g464760 Medicago truncatula HOM05D004171 ORTHO05D004983 3.6e-85 318.9 236 62.7
FAN16G3093 Fragaria x ananassa HOM05D004171 ORTHO05D004983 4.7e-85 318.5 278 57.6
FAN11G0158 Fragaria x ananassa HOM05D004171 ORTHO05D004983 8.0e-85 317.8 278 57.9
Sed0025378 Sechium edule HOM05D004171 ORTHO05D004983 1.8e-84 316.6 274 58.4
TPR.G25226 Trifolium pratense HOM05D004171 ORTHO05D004983 1.8e-84 316.6 272 57.7
Carub.0007s1352 Capsella rubella HOM05D004171 ORTHO05D004983 4.0e-84 315.5 280 54.3
Aa31LG3G10200 Aethionema arabicum HOM05D004171 ORTHO05D004983 6.8e-84 314.7 282 55.7
FAN25G0362 Fragaria x ananassa HOM05D004171 ORTHO05D004983 6.8e-84 314.7 278 56.8
Sc16g0006730 Simmondsia chinensis HOM05D004171 ORTHO05D004983 8.8e-84 314.3 268 55.6
TWI39G0675 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 8.8e-84 314.3 234 62.8
unitig_699.g19211 Utricularia gibba HOM05D004171 ORTHO05D004983 8.8e-84 314.3 264 58.0
BcaC09g50583 Brassica carinata HOM05D002586 ORTHO05D007009 2.6e-83 312.8 274 55.5
BraA02t06113Z Brassica rapa HOM05D004171 ORTHO05D004983 4.4e-83 312.0 278 54.3
BcaB05g22115 Brassica carinata HOM05D004171 ORTHO05D004983 9.8e-83 310.8 283 54.8
A02p10500 Brassica napus HOM05D004171 ORTHO05D004983 9.8e-83 310.8 278 54.3
ATR0693G292 Amborella trichopoda HOM05D004171 ORTHO05D004983 1.7e-82 310.1 247 58.7
Thhalv10014333m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 1.7e-82 310.1 282 54.6
CARHR267500 Cardamine hirsuta HOM05D004171 ORTHO05D004983 2.2e-82 309.7 283 54.4
AT5G54240 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 3.7e-82 308.9 284 54.2
C09p44520 Brassica napus HOM05D004171 ORTHO05D004983 4.9e-82 308.5 246 59.3
BraA10t43247Z Brassica rapa HOM05D004171 ORTHO05D004983 4.9e-82 308.5 246 59.3
BcaB08g35778 Brassica carinata HOM05D004171 ORTHO05D004983 6.3e-82 308.1 246 59.8
MBI18_g27681_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 6.3e-82 308.1 288 53.1
CDE02G1151 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 1.1e-81 307.4 273 54.6
BcaC04g20360 Brassica carinata HOM05D004171 ORTHO05D004983 1.4e-81 307.0 246 58.9
BolC9t57324H Brassica oleracea HOM05D004171 ORTHO05D004983 1.4e-81 307.0 246 58.9
Sp6g16280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 1.8e-81 306.6 282 53.9
Aa31LG5G10160 Aethionema arabicum HOM05D002586 ORTHO05D007009 2.4e-81 306.2 278 52.5
A10p11530 Brassica napus HOM05D004171 ORTHO05D004983 4.1e-81 305.4 246 58.9
AL8G29560 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 7.7e-80 301.2 284 52.8
Carub.0008s1458 Capsella rubella HOM05D004171 ORTHO05D004983 2.3e-79 299.7 285 51.2
HPP92_012360 Vanilla planifolia HOM05D004171 ORTHO05D004983 5.0e-79 298.5 270 52.2
CANSAT11G0840 Cannabis sativa HOM05D004171 ORTHO05D004983 3.3e-78 295.8 238 61.3
DCAR_008697 Daucus carota HOM05D004171 ORTHO05D004983 6.1e-77 291.6 257 55.6
Gorai.004G029100 Gossypium raimondii HOM05D004171 ORTHO05D004983 9.2e-73 277.7 271 52.0
FAN21G0927 Fragaria x ananassa HOM05D004171 ORTHO05D004983 2.7e-72 276.2 237 58.2
Gohir.A08G020900 Gossypium hirsutum HOM05D004171 ORTHO05D004983 4.6e-72 275.4 271 51.7
Os07g0559400 Oryza sativa ssp. japonica HOM05D004171 ORTHO05D004983 3.3e-70 269.2 278 47.5
CDE01G0586 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 1.2e-69 267.3 238 54.2
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 2.1e-69 266.5 223 54.3
Potri.001G408001 Populus trichocarpa HOM05D004171 ORTHO05D004983 2.3e-68 263.1 185 64.9
Zm00001eb324170 Zea mays HOM05D004171 ORTHO05D004983 2.3e-68 263.1 268 47.8
CAN.G847.1 Capsicum annuum HOM05D004171 ORTHO05D004983 3.5e-64 249.2 199 62.3
Mapoly0102s0009 Marchantia polymorpha HOM05D004171 ORTHO05D004983 3.5e-64 249.2 243 46.1
SMO116G0055 Selaginella moellendorffii HOM05D004171 ORTHO05D004983 9.8e-59 231.1 235 43.4
Pp3c3_11900 Physcomitrium patens HOM05D004171 ORTHO05D004983 9.2e-57 224.6 236 44.1
SEGI_27365 Sequoiadendron giganteum HOM05D004171 ORTHO05D004983 9.2e-57 224.6 209 49.8
CAN.G187.6 Capsicum annuum HOM05D004171 ORTHO05D004983 2.3e-55 219.9 186 59.1
Oeu019367.1 Olea europaea HOM05D004171 ORTHO05D004983 1.4e-52 210.7 153 66.0
Nn1g03875 Nelumbo nucifera HOM05D004171 ORTHO05D004983 4.4e-51 205.7 181 58.0
Nn1g06780 Nelumbo nucifera HOM05D004171 ORTHO05D004983 8.6e-47 191.4 153 61.4
Ca_22993_v3 Cicer arietinum L. HOM05D004171 ORTHO05D004983 6.2e-45 185.3 151 57.0
AagrBONN_evm.TU.Sc2ySwM_228.913 Anthoceros agrestis HOM05D004171 ORTHO05D004983 3.1e-44 183.0 206 43.2
CDE12G0832 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 7.6e-43 178.3 202 44.6
Gohir.D08G031500 Gossypium hirsutum HOM05D004171 ORTHO05D004983 3.8e-42 176.0 170 51.8
CBR_g24077 Chara braunii HOM05D004171 ORTHO05D004983 1.1e-41 174.5 235 38.3
C02p17300 Brassica napus HOM05D004171 ORTHO05D004983 4.6e-32 142.5 138 51.4
BolC2t07830H Brassica oleracea HOM05D004171 ORTHO05D004983 7.9e-32 141.7 138 52.2
BolC2t07836H Brassica oleracea HOM05D004171 ORTHO05D004983 7.9e-32 141.7 138 52.2
BcaNung05202 Brassica carinata HOM05D004171 ORTHO05D004983 1.3e-21 107.8 113 46.0
CBR_g54085 Chara braunii HOM05D000019 ORTHO05D000002 4.0e-20 102.8 118 42.4
AL9U10820 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 3.8e-18 96.3 74 58.1
CDE05G1305 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 2.1e-16 90.5 177 30.5
Lsat_1_v5_gn_4_59760 Lactuca sativa HOM05D004171 ORTHO05D230804 3.9e-07 59.7 64 45.3


User provided reference genes

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