Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G3452 Erigeron canadensis HOM05D003453 ORTHO05D004154 1.0e-93 347.8 374 100.0
HanXRQChr05g0142141 Helianthus annuus HOM05D003453 ORTHO05D004154 7.1e-63 245.4 336 78.6
Lsat_1_v5_gn_8_68380 Lactuca sativa HOM05D003453 ORTHO05D004154 1.1e-50 204.9 331 76.1
Duzib168G0040 Durio zibethinus HOM05D003453 ORTHO05D004154 1.8e-42 177.6 325 60.9
Lsat_1_v5_gn_7_55120 Lactuca sativa HOM05D003453 ORTHO05D004154 1.3e-40 171.4 325 72.6
HanXRQChr04g0103791 Helianthus annuus HOM05D003453 ORTHO05D004154 2.2e-40 170.6 331 72.8
Duzib150G0655 Durio zibethinus HOM05D003453 ORTHO05D004154 3.8e-40 169.9 327 60.6
MD13G1241200 Malus domestica HOM05D003453 ORTHO05D004154 5.0e-40 169.5 325 60.6
FAN22G1784 Fragaria x ananassa HOM05D003453 ORTHO05D004154 8.5e-40 168.7 325 52.3
FAN12G0296 Fragaria x ananassa HOM05D003453 ORTHO05D004154 3.2e-39 166.8 325 50.5
Prupe.1G072100 Prunus persica HOM05D003453 ORTHO05D004154 3.2e-39 166.8 325 59.7
Thecc.09G192200 Theobroma cacao HOM05D003453 ORTHO05D004154 4.2e-39 166.4 316 61.7
Gohir.A13G182300 Gossypium hirsutum HOM05D003453 ORTHO05D004154 7.2e-39 165.6 325 61.5
Atru.chr7.914 Acer truncatum HOM05D003453 ORTHO05D004154 9.4e-39 165.2 331 59.5
Gorai.013G211100 Gossypium raimondii HOM05D003453 ORTHO05D004154 3.6e-38 163.3 327 61.2
CSS0013411 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 4.7e-38 162.9 330 58.2
CSS0032765 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 4.7e-38 162.9 330 58.2
MD16G1245200 Malus domestica HOM05D003453 ORTHO05D004154 4.7e-38 162.9 326 60.1
Ciclev10008785m.g Citrus clementina HOM05D003453 ORTHO05D004154 2.3e-37 160.6 324 59.0
ECA240G3569 Erigeron canadensis HOM05D003453 ORTHO05D004154 2.3e-37 160.6 331 70.1
ClCG06G013840 Citrullus lanatus HOM05D003453 ORTHO05D004154 3.9e-37 159.8 248 71.8
Duzib170G0719 Durio zibethinus HOM05D003453 ORTHO05D004154 5.2e-37 159.5 326 66.9
Cpa.g.sc115.61 Carica papaya HOM05D003453 ORTHO05D004154 6.7e-37 159.1 327 61.2
Actinidia38507 Actinidia chinensis HOM05D003453 ORTHO05D004154 8.8e-37 158.7 319 56.7
Gorai.012G008100 Gossypium raimondii HOM05D003453 ORTHO05D004154 1.1e-36 158.3 313 55.6
PGR044G1644 Punica granatum HOM05D003453 ORTHO05D004154 1.1e-36 158.3 325 55.7
TWI34G1803 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 2.0e-36 157.5 326 64.4
Sed0020380 Sechium edule HOM05D003453 ORTHO05D004154 7.4e-36 155.6 317 65.3
TWI32G0581 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 7.4e-36 155.6 335 62.4
Lj4g0007200 Lotus japonicus HOM05D003453 ORTHO05D004154 1.7e-35 154.5 316 64.2
Sabra06G0054100 Salix brachista HOM05D003453 ORTHO05D004154 2.8e-35 153.7 335 63.3
COL.COLO4_37566 Corchorus olitorius HOM05D003453 ORTHO05D004154 4.8e-35 152.9 332 54.5
CsaV3_1G032040 Cucumis sativus L. HOM05D003453 ORTHO05D004154 8.2e-35 152.1 309 66.3
Potri.006G072700 Populus trichocarpa HOM05D003453 ORTHO05D004154 8.2e-35 152.1 338 62.1
GSVIVG01029273001 Vitis vinifera HOM05D003453 ORTHO05D004154 8.2e-35 152.1 248 77.4
Manes.14G161200 Manihot esculenta HOM05D003453 ORTHO05D004154 1.1e-34 151.8 326 63.8
Oeu044656.1 Olea europaea HOM05D003453 ORTHO05D004154 1.1e-34 151.8 330 56.7
Lalb_Chr13g0299841 Lupinus albus HOM05D003453 ORTHO05D004154 3.1e-34 150.2 317 57.4
TPR.G5414 Trifolium pratense HOM05D003453 ORTHO05D004154 5.3e-34 149.4 325 55.1
Nn8g40645 Nelumbo nucifera HOM05D003453 ORTHO05D004154 7.0e-34 149.1 326 52.8
FvH4_4g06910 Fragaria vesca HOM05D003453 ORTHO05D004154 9.1e-34 148.7 325 51.1
Aa31LG8G16370 Aethionema arabicum HOM05D003453 ORTHO05D004154 1.2e-33 148.3 336 58.6
FAN07G0750 Fragaria x ananassa HOM05D003453 ORTHO05D004154 1.2e-33 148.3 325 51.1
VMungo1215G2556 Vigna mungo HOM05D003453 ORTHO05D004154 1.6e-33 147.9 315 58.1
FAN17G0675 Fragaria x ananassa HOM05D003453 ORTHO05D004154 2.0e-33 147.5 325 50.5
RcHm_v2.0_Chr4g0398811 Rosa chinensis HOM05D003453 ORTHO05D004154 2.6e-33 147.1 329 50.5
ClCG11G011550 Citrullus lanatus HOM05D003453 ORTHO05D004154 3.5e-33 146.7 328 59.8
Cc06_g17230 Coffea canephora HOM05D003453 ORTHO05D004154 3.5e-33 146.7 260 62.3
Glyma.17G057600 Glycine max HOM05D003453 ORTHO05D004154 4.5e-33 146.4 334 60.2
Phvul.003G139800 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 4.5e-33 146.4 325 60.6
Actinidia29965 Actinidia chinensis HOM05D003453 ORTHO05D004154 5.9e-33 146.0 165 54.5
Ah.09g228510 Amaranthus hybridus HOM05D003453 ORTHO05D004154 5.9e-33 146.0 258 70.5
Rhsim03G0267900 Rhododendron simsii HOM05D003453 ORTHO05D004154 7.7e-33 145.6 304 75.7
EL10Ac8g19292 Beta vulgaris HOM05D003453 ORTHO05D004154 1.3e-32 144.8 324 54.6
PGSC0003DMG400006458 Solanum tuberosum HOM05D003453 ORTHO05D004154 1.7e-32 144.4 323 71.2
Aqoxy7G02898 Aquilegia oxysepala HOM05D003453 ORTHO05D004154 2.2e-32 144.1 321 50.8
Oeu035455.1 Olea europaea HOM05D003453 ORTHO05D004154 2.2e-32 144.1 327 52.3
Manes.06G017500 Manihot esculenta HOM05D003453 ORTHO05D004154 2.9e-32 143.7 324 64.8
Sp3g32700 Schrenkiella parvula HOM05D003453 ORTHO05D004154 2.9e-32 143.7 327 57.8
Medtr4g127120 Medicago truncatula HOM05D003453 ORTHO05D004154 3.8e-32 143.3 320 54.4
AT2G19330 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 5.0e-32 142.9 327 57.8
AL3G48980 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 6.5e-32 142.5 327 57.5
SalBow3G1932 Salvia bowleyana HOM05D003453 ORTHO05D004154 6.5e-32 142.5 330 59.7
QL02p064658 Quercus lobata HOM05D003453 ORTHO05D004154 1.1e-31 141.7 328 67.4
Sopen12g008270 Solanum pennellii HOM05D003453 ORTHO05D004154 1.1e-31 141.7 321 66.7
Dinv25469 Davidia involucrata HOM05D003453 ORTHO05D004154 2.5e-31 140.6 325 58.5
Thhalv10022960m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 2.5e-31 140.6 332 56.9
Eucgr.C00085 Eucalyptus grandis HOM05D003453 ORTHO05D004154 3.2e-31 140.2 155 55.5
Gohir.D04G006700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 3.2e-31 140.2 313 55.0
Solyc12g017480.3 Solanum lycopersicum HOM05D003453 ORTHO05D004154 4.2e-31 139.8 321 66.4
THA.LOC104814639 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 4.2e-31 139.8 331 62.5
CiPaw.07G199200 Carya illinoinensis HOM05D003453 ORTHO05D004154 5.5e-31 139.4 166 50.6
Lalb_Chr07g0180741 Lupinus albus HOM05D003453 ORTHO05D004154 7.2e-31 139.0 314 56.4
Oeu043899.1 Olea europaea HOM05D003453 ORTHO05D004154 7.2e-31 139.0 331 51.4
Psat4g014280 Pisum sativum HOM05D003453 ORTHO05D004154 7.2e-31 139.0 319 42.6
Sabra18G0114200 Salix brachista HOM05D003453 ORTHO05D004154 9.4e-31 138.7 267 66.7
CARHR237770 Cardamine hirsuta HOM05D003453 ORTHO05D004154 1.2e-30 138.3 341 66.0
Eucgr.C00084 Eucalyptus grandis HOM05D003453 ORTHO05D004154 1.2e-30 138.3 156 62.8
Gohir.A05G408700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 1.2e-30 138.3 309 54.4
Potri.018G139700 Populus trichocarpa HOM05D003453 ORTHO05D004154 1.2e-30 138.3 333 58.6
ATR0580G242 Amborella trichopoda HOM05D003453 ORTHO05D004154 2.7e-30 137.1 330 65.8
C07p54660 Brassica napus HOM05D003453 ORTHO05D004154 2.7e-30 137.1 262 60.7
BolC7t45955H Brassica oleracea HOM05D003453 ORTHO05D004154 2.7e-30 137.1 262 60.7
Carub.0003s3355 Capsella rubella HOM05D003453 ORTHO05D004154 2.7e-30 137.1 326 57.7
A07p01420 Brassica napus HOM05D003453 ORTHO05D004154 3.6e-30 136.7 327 56.6
C07p02870 Brassica napus HOM05D003453 ORTHO05D004154 3.6e-30 136.7 327 56.6
BolC7t40684H Brassica oleracea HOM05D003453 ORTHO05D004154 3.6e-30 136.7 327 56.6
BraA07t27936Z Brassica rapa HOM05D003453 ORTHO05D004154 3.6e-30 136.7 327 56.6
CANSAT11G2669 Cannabis sativa HOM05D003453 ORTHO05D004154 4.7e-30 136.3 330 60.9
Migut.J00777 Erythranthe guttata HOM05D003453 ORTHO05D004154 4.7e-30 136.3 325 53.5
Lju432C7T0 Lonicera japonica HOM05D003453 ORTHO05D004154 4.7e-30 136.3 104 68.3
Lju50A41T23 Lonicera japonica HOM05D003453 ORTHO05D004154 4.7e-30 136.3 104 68.3
Lju50A42T20 Lonicera japonica HOM05D003453 ORTHO05D004154 4.7e-30 136.3 104 68.3
BcaB03g16722 Brassica carinata HOM05D003453 ORTHO05D004154 6.1e-30 136.0 327 56.6
HanXRQChr09g0245371 Helianthus annuus HOM05D003453 ORTHO05D004154 6.1e-30 136.0 331 61.3
TAR625G0633 Trochodendron aralioides HOM05D003453 ORTHO05D004154 8.0e-30 135.6 259 70.3
MBI16_g09350_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 1.0e-29 135.2 325 60.0
PSO063G4618 Papaver somniferum HOM05D003453 ORTHO05D004154 1.0e-29 135.2 311 63.3
Rhsim02G0202600 Rhododendron simsii HOM05D003453 ORTHO05D004154 2.3e-29 134.0 255 74.5
AL7G22370 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 3.0e-29 133.7 260 70.0
PSO170G1153 Papaver somniferum HOM05D003453 ORTHO05D004154 4.0e-29 133.3 311 63.0
Thhalv10027502m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 6.8e-29 132.5 332 62.0
AT4G29880 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 8.8e-29 132.1 337 62.6
arahy.Tifrunner.gnm1.ann1.JP7J3T Arachis hypogaea HOM05D003453 ORTHO05D004154 8.8e-29 132.1 170 45.3
Haze_22047 Corylus avellana HOM05D003453 ORTHO05D004154 8.8e-29 132.1 335 38.2
THA.LOC104817769 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 8.8e-29 132.1 330 57.6
arahy.Tifrunner.gnm1.ann1.SX1TLQ Arachis hypogaea HOM05D003453 ORTHO05D004154 1.2e-28 131.7 170 49.4
Peaxi162Scf00006g02914 Petunia axillaris HOM05D003453 ORTHO05D004154 2.0e-28 131.0 315 59.0
CARHR109780 Cardamine hirsuta HOM05D003453 ORTHO05D004154 2.6e-28 130.6 329 55.6
Ca_21264_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 4.4e-28 129.8 319 53.9
CsaV3_2G008970 Cucumis sativus L. HOM05D003453 ORTHO05D004154 5.7e-28 129.4 328 55.2
Glyma.09G061500 Glycine max HOM05D003453 ORTHO05D004154 5.7e-28 129.4 322 58.4
BraA03t14715Z Brassica rapa HOM05D003453 ORTHO05D004154 9.7e-28 128.6 266 55.3
SHI03070 Sapria himalayana HOM05D003453 ORTHO05D004154 9.7e-28 128.6 323 42.7
VMungo1309G3166 Vigna mungo HOM05D003453 ORTHO05D004154 9.7e-28 128.6 318 61.0
Hund24523 Selenicereus undatus HOM05D003453 ORTHO05D004154 1.3e-27 128.3 307 60.9
Carub.0004s1475 Capsella rubella HOM05D003453 ORTHO05D004154 2.2e-27 127.5 337 57.3
Carub.0007s1491 Capsella rubella HOM05D003453 ORTHO05D004154 2.8e-27 127.1 259 62.2
DCAR_020142 Daucus carota HOM05D003453 ORTHO05D004154 3.7e-27 126.7 338 45.3
MELO3C003949.2 Cucumis melo HOM05D003453 ORTHO05D004154 4.8e-27 126.3 328 57.9
Glyma.15G167800 Glycine max HOM05D003453 ORTHO05D004154 4.8e-27 126.3 323 56.7
BcaC06g32772 Brassica carinata HOM05D003453 ORTHO05D004154 6.3e-27 125.9 262 69.1
CDE02G3632 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 8.3e-27 125.6 311 58.2
AUR62031265 Chenopodium quinoa HOM05D003453 ORTHO05D004154 8.3e-27 125.6 171 55.0
Lalb_Chr23g0276711 Lupinus albus HOM05D003453 ORTHO05D004154 8.3e-27 125.6 324 53.4
CiPaw.08G031400 Carya illinoinensis HOM05D003453 ORTHO05D004154 1.1e-26 125.2 327 52.0
Phvul.009G234500 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 1.4e-26 124.8 318 55.7
Eucgr.C02218 Eucalyptus grandis HOM05D003453 ORTHO05D004154 1.8e-26 124.4 325 58.5
unitig_578.g15728 Utricularia gibba HOM05D003453 ORTHO05D004154 1.8e-26 124.4 259 53.3
AT4G26050 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 3.1e-26 123.6 259 69.5
AL7G26940 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 5.3e-26 122.9 259 68.7
C01p21810 Brassica napus HOM05D003453 ORTHO05D004154 5.3e-26 122.9 270 69.3
Os04g0605300 Oryza sativa ssp. japonica HOM05D003453 ORTHO05D004154 5.3e-26 122.9 168 61.3
AUR62027430 Chenopodium quinoa HOM05D003453 ORTHO05D004154 7.0e-26 122.5 171 54.4
Thhalv10025419m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 7.0e-26 122.5 258 70.2
SHI33663 Sapria himalayana HOM05D003453 ORTHO05D004154 2.7e-25 120.6 161 61.5
DCAR_009479 Daucus carota HOM05D003453 ORTHO05D004154 3.5e-25 120.2 338 48.2
A03p56450 Brassica napus HOM05D003453 ORTHO05D004154 4.5e-25 119.8 262 66.8
A01p17310 Brassica napus HOM05D003453 ORTHO05D004154 5.9e-25 119.4 270 68.5
BraA01t01686Z Brassica rapa HOM05D003453 ORTHO05D004154 5.9e-25 119.4 270 68.5
BolC1t02107H Brassica oleracea HOM05D003453 ORTHO05D004154 7.7e-25 119.0 270 68.9
Ca_02128_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 7.7e-25 119.0 321 62.9
Aa31LG3G390 Aethionema arabicum HOM05D003453 ORTHO05D004154 1.0e-24 118.6 266 50.8
CARHR233550 Cardamine hirsuta HOM05D003453 ORTHO05D004154 1.0e-24 118.6 260 69.6
MSTRG.19360 Avicennia marina HOM05D003453 ORTHO05D004154 1.3e-24 118.2 144 66.7
Sc08g0004730 Simmondsia chinensis HOM05D003453 ORTHO05D004154 1.3e-24 118.2 166 59.0
Nitab4.5_0001335g0020 Nicotiana tabacum HOM05D003453 ORTHO05D004154 5.0e-24 116.3 325 50.8
Psat1g142440 Pisum sativum HOM05D003453 ORTHO05D004154 1.5e-23 114.8 317 64.0
Aa31LG2G20670 Aethionema arabicum HOM05D003453 ORTHO05D004154 1.9e-23 114.4 167 49.1
Hma1.2p1_0235F.1_g098820 Hydrangea macrophylla HOM05D003453 ORTHO05D004154 2.5e-23 114.0 275 58.2
TPR.G2523 Trifolium pratense HOM05D003453 ORTHO05D004154 3.2e-23 113.6 314 59.6
A03p59300 Brassica napus HOM05D003453 ORTHO05D004154 4.2e-23 113.2 260 64.2
BraA03t14987Z Brassica rapa HOM05D003453 ORTHO05D004154 4.2e-23 113.2 260 64.2
Sed0024940 Sechium edule HOM05D003453 ORTHO05D004154 4.2e-23 113.2 97 57.7
Lj6g0025589 Lotus japonicus HOM05D003453 ORTHO05D004154 5.5e-23 112.8 310 54.8
CDE05G1169 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 1.2e-22 111.7 320 44.4
CDE05G3189 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 1.2e-22 111.7 318 52.2
MBI14_g10728_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 2.1e-22 110.9 165 58.2
Zm00001eb071570 Zea mays HOM05D003453 ORTHO05D004154 2.1e-22 110.9 164 57.3
arahy.Tifrunner.gnm1.ann1.N816GG Arachis hypogaea HOM05D003453 ORTHO05D004154 4.7e-22 109.8 250 61.2
DCAR_018009 Daucus carota HOM05D003453 ORTHO05D004154 1.0e-21 108.6 332 51.2
Oeu012385.1 Olea europaea HOM05D003453 ORTHO05D004154 1.0e-21 108.6 152 44.7
PSO063G7373 Papaver somniferum HOM05D003453 ORTHO05D004154 1.0e-21 108.6 320 58.1
PGR018G0002 Punica granatum HOM05D003453 ORTHO05D004154 1.4e-21 108.2 327 61.5
PGR142G3132 Punica granatum HOM05D003453 ORTHO05D004154 1.4e-21 108.2 327 61.5
PGR142G4131 Punica granatum HOM05D003453 ORTHO05D004154 1.4e-21 108.2 327 61.5
arahy.Tifrunner.gnm1.ann1.3E2B2N Arachis hypogaea HOM05D003453 ORTHO05D004154 4.0e-21 106.7 250 60.4
SGA_v2.0_scaffold31G12781 Striga asiatica HOM05D003453 ORTHO05D004154 2.6e-20 104.0 104 51.9
Psat1g142960 Pisum sativum HOM05D003453 ORTHO05D004154 5.7e-20 102.8 159 57.9
Medtr2g038380 Medicago truncatula HOM05D003453 ORTHO05D004154 4.8e-19 99.8 322 56.5
vmacro22287 Vaccinium macrocarpon HOM05D003453 ORTHO05D004154 6.3e-19 99.4 147 63.9
Sed0001635 Sechium edule HOM05D003453 ORTHO05D004154 2.0e-17 94.4 239 47.3
BcaNung00498 Brassica carinata HOM05D003453 ORTHO05D004154 3.5e-17 93.6 108 53.7
BolC7t46200H Brassica oleracea HOM05D003453 ORTHO05D004154 2.3e-16 90.9 106 53.8
MELO3C029529.2 Cucumis melo HOM05D003453 ORTHO05D004154 2.9e-16 90.5 73 63.0
Sp7g27690 Schrenkiella parvula HOM05D003453 ORTHO05D004154 5.0e-16 89.7 106 53.8
C07p57310 Brassica napus HOM05D003453 ORTHO05D004154 6.6e-16 89.4 101 54.5
Sc14g0003130 Simmondsia chinensis HOM05D003453 ORTHO05D004154 8.6e-16 89.0 114 46.5
Gohir.D13G185000 Gossypium hirsutum HOM05D003453 ORTHO05D004154 1.8e-13 81.3 260 64.6
BcaC06g36564 Brassica carinata HOM05D003453 ORTHO05D004154 9.2e-10 68.9 184 71.7
HPP92_010787 Vanilla planifolia HOM05D003453 ORTHO05D004154 1.6e-09 68.2 105 41.0
BcaB08g34854 Brassica carinata HOM05D003453 ORTHO05D004154 7.8e-09 65.9 117 44.4
SpUn0235_0010 Schrenkiella parvula HOM05D003453 ORTHO05D004154 6.1e-06 56.2 166 75.9


User provided reference genes

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