Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G3422 Erigeron canadensis HOM05D007398 ORTHO05D004912 1.9e-69 265.8 137 100.0
Lsat_1_v5_gn_7_92201 Lactuca sativa HOM05D007398 ORTHO05D004912 7.2e-37 157.5 149 63.8
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 5.7e-26 121.3 139 52.5
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 7.4e-26 120.9 139 55.4
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 7.4e-26 120.9 139 55.4
Lsat_1_v5_gn_9_106500 Lactuca sativa HOM05D007398 ORTHO05D004912 6.3e-25 117.9 141 51.8
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 3.5e-23 112.1 139 52.5
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 8.5e-22 107.5 139 49.6
Prupe.3G217200 Prunus persica HOM05D007398 ORTHO05D004912 3.2e-21 105.5 140 47.1
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 5.5e-21 104.8 128 53.9
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 9.4e-21 104.0 143 44.8
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 1.2e-20 103.6 143 44.8
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 2.7e-20 102.4 140 47.1
FvH4_6g43180 Fragaria vesca HOM05D007398 ORTHO05D004912 4.7e-20 101.7 140 47.1
FAN10G4171 Fragaria x ananassa HOM05D007398 ORTHO05D004912 4.7e-20 101.7 140 47.1
HanXRQChr16g0504931 Helianthus annuus HOM05D007398 ORTHO05D004912 6.1e-20 101.3 138 47.8
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 1.0e-19 100.5 142 43.7
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.4e-19 100.1 140 47.1
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 1.8e-19 99.8 144 46.5
FAN05G1963 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.8e-19 99.8 140 46.4
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 2.3e-19 99.4 134 44.8
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 3.0e-19 99.0 140 45.7
CANSAT64G0797 Cannabis sativa HOM05D007398 ORTHO05D004912 4.0e-19 98.6 141 48.2
HanXRQChr03g0069481 Helianthus annuus HOM05D007398 ORTHO05D004912 4.0e-19 98.6 132 52.3
MD17G1096900 Malus domestica HOM05D007398 ORTHO05D004912 5.2e-19 98.2 140 42.9
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.2e-18 97.1 142 45.8
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 2.0e-18 96.3 142 47.9
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 5.7e-18 94.7 142 47.2
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 2.2e-17 92.8 142 46.5
arahy.Tifrunner.gnm1.ann1.X0QM4L Arachis hypogaea HOM05D007398 ORTHO05D004912 6.3e-17 91.3 145 44.1
Rhsim06G0162600 Rhododendron simsii HOM05D007398 ORTHO05D004912 8.3e-17 90.9 143 44.8
arahy.Tifrunner.gnm1.ann1.TIC55L Arachis hypogaea HOM05D007398 ORTHO05D004912 1.8e-16 89.7 145 44.1
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 2.4e-16 89.4 144 45.1
PSO541G0095 Papaver somniferum HOM05D007398 ORTHO05D004912 3.1e-16 89.0 146 44.5
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 5.3e-16 88.2 146 44.5
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 5.3e-16 88.2 131 45.0
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 9.1e-16 87.4 143 46.2
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 1.6e-15 86.7 116 50.9
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 1.6e-15 86.7 135 42.2
Cc05_g04620 Coffea canephora HOM05D007398 ORTHO05D004912 4.5e-15 85.1 139 42.4
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 5.9e-15 84.7 130 45.4
TWI18G0787 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 2.9e-14 82.4 143 44.8
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 5.0e-14 81.6 124 44.4
Oeu041920.1 Olea europaea HOM05D007398 ORTHO05D004912 6.5e-14 81.3 123 43.9
VMungo1080G0246 Vigna mungo HOM05D007398 ORTHO05D004912 6.5e-14 81.3 137 43.1
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 2.5e-13 79.3 129 40.3
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 2.5e-13 79.3 137 40.9
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 3.2e-13 79.0 137 41.6
Gorai.008G173500 Gossypium raimondii HOM05D007398 ORTHO05D004912 1.6e-12 76.6 129 38.8
Duzib248G0799 Durio zibethinus HOM05D007398 ORTHO05D004912 2.1e-12 76.3 130 42.3
Gohir.A12G157600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 3.6e-12 75.5 129 38.8
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 3.6e-12 75.5 96 51.0
Gohir.D12G159800 Gossypium hirsutum HOM05D007398 ORTHO05D004912 4.7e-12 75.1 129 38.8
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 6.1e-12 74.7 129 41.1
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 3.0e-11 72.4 142 41.5
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 3.0e-11 72.4 118 44.9
MBI02_g21879_MAGBIO Magnolia biondii HOM05D007398 ORTHO05D004912 5.2e-11 71.6 123 42.3
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 8.8e-11 70.9 126 42.9
Sed0010410 Sechium edule HOM05D007398 ORTHO05D004912 8.8e-11 70.9 133 42.9
Glyma.12G193700 Glycine max HOM05D007398 ORTHO05D004912 1.2e-10 70.5 138 39.9
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 4.4e-10 68.6 142 37.3
Gohir.A04G144600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 5.7e-10 68.2 119 38.7
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 5.7e-10 68.2 141 38.3
Gorai.012G184400 Gossypium raimondii HOM05D007398 ORTHO05D004912 7.5e-10 67.8 122 38.5
Medtr2g088320 Medicago truncatula HOM05D007398 ORTHO05D004912 7.5e-10 67.8 118 39.0
Gohir.D04G189100 Gossypium hirsutum HOM05D007398 ORTHO05D004912 9.8e-10 67.4 122 38.5
Sed0025347 Sechium edule HOM05D007398 ORTHO05D004912 9.8e-10 67.4 143 39.2
ECA240G1365 Erigeron canadensis HOM05D007398 ORTHO05D004912 1.3e-09 67.0 106 45.3
Eucgr.K00797 Eucalyptus grandis HOM05D007398 ORTHO05D004912 2.2e-09 66.2 141 39.7
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 2.2e-09 66.2 138 39.1
PGR083G1220 Punica granatum HOM05D007398 ORTHO05D004912 2.8e-09 65.9 126 40.5
SEGI_01426 Sequoiadendron giganteum HOM05D007398 ORTHO05D004912 4.8e-09 65.1 123 35.8
Zm00001eb273730 Zea mays HOM05D007398 ORTHO05D004912 1.8e-08 63.2 125 42.4
THA.LOC104813425 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 4.1e-08 62.0 121 40.5
Sed0017095 Sechium edule HOM05D007398 ORTHO05D004912 1.2e-07 60.5 130 36.9
CsaV3_7G003580 Cucumis sativus L. HOM05D007398 ORTHO05D004912 2.7e-07 59.3 129 35.7
ATR0794G061 Amborella trichopoda HOM05D007398 ORTHO05D004912 3.5e-07 58.9 135 36.3
ClCG00G003290 Citrullus lanatus HOM05D007398 ORTHO05D004912 5.9e-07 58.2 129 34.9
ClCG02G001930 Citrullus lanatus HOM05D007398 ORTHO05D004912 5.9e-07 58.2 129 34.9
MELO3C018817.2 Cucumis melo HOM05D007398 ORTHO05D004912 5.9e-07 58.2 129 36.4
Lj4g0016348 Lotus japonicus HOM05D007398 ORTHO05D004912 5.9e-07 58.2 118 36.4
CDE01G0169 Ceratophyllum demersum HOM05D001264 ORTHO05D001167 7.7e-07 57.8 139 38.1
ClCG02G008700 Citrullus lanatus HOM05D007398 ORTHO05D004912 1.3e-06 57.0 143 38.5
THA.LOC104817668 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 2.9e-06 55.8 122 39.3
AL8G30440 Arabidopsis lyrata HOM05D009587 ORTHO05D004912 5.0e-06 55.1 127 36.2


User provided reference genes

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