Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G3296 Erigeron canadensis HOM05D007507 ORTHO05D009420 5.0e-57 224.2 110 100.0
HanXRQChr04g0113131 Helianthus annuus HOM05D007507 ORTHO05D009420 6.4e-28 127.5 88 71.6
Lsat_1_v5_gn_7_22681 Lactuca sativa HOM05D007507 ORTHO05D009420 1.9e-27 125.9 84 73.8
CSS0001598 Camellia sinensis var. sinensis HOM05D007507 ORTHO05D009420 3.4e-21 105.1 103 54.4
Actinidia16570 Actinidia chinensis HOM05D007507 ORTHO05D009420 2.2e-20 102.4 88 61.4
Glyma.07G201000 Glycine max HOM05D007507 ORTHO05D009420 1.4e-19 99.8 86 65.1
Glyma.13G175400 Glycine max HOM05D007507 ORTHO05D009420 7.1e-19 97.4 86 64.0
Thecc.06G181600 Theobroma cacao HOM05D007507 ORTHO05D009420 1.2e-18 96.7 88 61.4
TAR626G1744 Trochodendron aralioides HOM05D007507 ORTHO05D009420 1.6e-18 96.3 79 67.1
VMungo0251G0526 Vigna mungo HOM05D007507 ORTHO05D009420 2.1e-18 95.9 80 67.5
Dinv17350 Davidia involucrata HOM05D007507 ORTHO05D009420 2.7e-18 95.5 110 50.9
Dinv40597 Davidia involucrata HOM05D007507 ORTHO05D009420 6.0e-18 94.4 93 58.1
GSVIVG01021107001 Vitis vinifera HOM05D007507 ORTHO05D009420 7.8e-18 94.0 87 62.1
Glyma.15G077500 Glycine max HOM05D007507 ORTHO05D009420 1.0e-17 93.6 82 64.6
Actinidia05654 Actinidia chinensis HOM05D007507 ORTHO05D009420 1.7e-17 92.8 87 57.5
Phvul.002G232000 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 1.7e-17 92.8 80 66.2
QL05p042078 Quercus lobata HOM05D007507 ORTHO05D009420 1.7e-17 92.8 74 67.6
Nn1g04226 Nelumbo nucifera HOM05D007507 ORTHO05D009420 3.0e-17 92.0 109 50.5
CANSAT35G2017 Cannabis sativa HOM05D007507 ORTHO05D009420 3.9e-17 91.7 78 61.5
Duzib235G0685 Durio zibethinus HOM05D007507 ORTHO05D009420 5.1e-17 91.3 86 60.5
Glyma.13G236200 Glycine max HOM05D007507 ORTHO05D009420 8.7e-17 90.5 87 62.1
Duzib192G0611 Durio zibethinus HOM05D007507 ORTHO05D009420 1.1e-16 90.1 84 58.3
MSTRG.14710 Avicennia marina HOM05D007507 ORTHO05D009420 1.9e-16 89.4 76 67.1
CiPaw.10G052300 Carya illinoinensis HOM05D007507 ORTHO05D009420 1.9e-16 89.4 81 59.3
DCAR_004049 Daucus carota HOM05D007507 ORTHO05D009420 1.9e-16 89.4 90 56.7
Lj4g0010126 Lotus japonicus HOM05D007507 ORTHO05D009420 3.3e-16 88.6 77 67.5
Lalb_Chr20g0121601 Lupinus albus HOM05D007507 ORTHO05D009420 1.2e-15 86.7 86 60.5
VMungo0540G0304 Vigna mungo HOM05D007507 ORTHO05D009420 1.2e-15 86.7 82 57.3
Migut.H01473 Erythranthe guttata HOM05D007507 ORTHO05D009420 1.6e-15 86.3 86 54.7
Phvul.006G182800 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 2.8e-15 85.5 86 58.1
Cc02_g13780 Coffea canephora HOM05D007507 ORTHO05D009420 4.7e-15 84.7 86 57.0
FvH4_3g08680 Fragaria vesca HOM05D007507 ORTHO05D009420 4.7e-15 84.7 103 47.6
Psat7g115600 Pisum sativum HOM05D007507 ORTHO05D009420 4.7e-15 84.7 90 54.4
Potri.011G057400 Populus trichocarpa HOM05D007507 ORTHO05D009420 6.2e-15 84.3 86 62.8
Gohir.A05G159400 Gossypium hirsutum HOM05D007507 ORTHO05D009420 8.1e-15 84.0 80 60.0
Cpa.g.sc27.9 Carica papaya HOM05D007507 ORTHO05D009420 1.4e-14 83.2 80 58.8
Gorai.010G158100 Gossypium raimondii HOM05D007507 ORTHO05D009420 1.4e-14 83.2 92 53.3
Potri.004G048201 Populus trichocarpa HOM05D007507 ORTHO05D009420 1.4e-14 83.2 83 59.0
Solyc02g077720.4 Solanum lycopersicum HOM05D007507 ORTHO05D009420 1.4e-14 83.2 88 54.5
Gorai.009G167100 Gossypium raimondii HOM05D007507 ORTHO05D009420 1.8e-14 82.8 74 63.5
RcHm_v2.0_Chr5g0009091 Rosa chinensis HOM05D007507 ORTHO05D009420 1.8e-14 82.8 105 49.5
PGSC0003DMG400031763 Solanum tuberosum HOM05D007507 ORTHO05D009420 1.8e-14 82.8 84 56.0
Prupe.4G051900 Prunus persica HOM05D007507 ORTHO05D009420 2.4e-14 82.4 82 59.8
Sopen02g022610 Solanum pennellii HOM05D007507 ORTHO05D009420 2.4e-14 82.4 93 52.7
TPR.G39426 Trifolium pratense HOM05D007507 ORTHO05D009420 2.4e-14 82.4 87 56.3
FAN21G1585 Fragaria x ananassa HOM05D007507 ORTHO05D009420 3.1e-14 82.0 105 48.6
Medtr4g088390 Medicago truncatula HOM05D007507 ORTHO05D009420 3.1e-14 82.0 73 68.5
Sabra04G0030100 Salix brachista HOM05D007507 ORTHO05D009420 3.1e-14 82.0 77 62.3
Gohir.D05G162100 Gossypium hirsutum HOM05D007507 ORTHO05D009420 4.0e-14 81.6 80 58.8
Gohir.D09G073200 Gossypium hirsutum HOM05D007507 ORTHO05D009420 4.0e-14 81.6 89 55.1
Gorai.006G088200 Gossypium raimondii HOM05D007507 ORTHO05D009420 4.0e-14 81.6 89 55.1
MD05G1310700 Malus domestica HOM05D007507 ORTHO05D009420 4.0e-14 81.6 95 53.7
FAN11G0818 Fragaria x ananassa HOM05D007507 ORTHO05D009420 9.0e-14 80.5 104 47.1
TWI38G1903 Tripterygium wilfordii HOM05D007507 ORTHO05D009420 9.0e-14 80.5 68 64.7
Gohir.A09G073500 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.2e-13 80.1 89 53.9
arahy.Tifrunner.gnm1.ann1.IERL18 Arachis hypogaea HOM05D007507 ORTHO05D009420 2.0e-13 79.3 78 61.5
arahy.Tifrunner.gnm1.ann1.UCBT0G Arachis hypogaea HOM05D007507 ORTHO05D009420 2.0e-13 79.3 78 61.5
Gohir.D06G135900 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.0e-13 79.3 89 52.8
DCAR_008007 Daucus carota HOM05D007507 ORTHO05D009420 2.6e-13 79.0 77 59.7
Sabra11G0039300 Salix brachista HOM05D007507 ORTHO05D009420 2.6e-13 79.0 86 60.5
Ciclev10016932m.g Citrus clementina HOM05D007507 ORTHO05D009420 5.8e-13 77.8 104 47.1
MD10G1289800 Malus domestica HOM05D007507 ORTHO05D009420 7.6e-13 77.4 99 51.5
Medtr2g014380 Medicago truncatula HOM05D007507 ORTHO05D009420 7.6e-13 77.4 83 53.0
ClCG01G023220 Citrullus lanatus HOM05D007507 ORTHO05D009420 9.9e-13 77.0 84 53.6
Manes.17G048900 Manihot esculenta HOM05D007507 ORTHO05D009420 9.9e-13 77.0 82 62.2
MBI07_g29118_MAGBIO Magnolia biondii HOM05D007507 ORTHO05D009420 1.3e-12 76.6 84 56.0
Atru.chr10.1804 Acer truncatum HOM05D007507 ORTHO05D009420 1.7e-12 76.3 89 50.6
PSO541G3558 Papaver somniferum HOM05D007507 ORTHO05D009420 2.9e-12 75.5 78 51.3
Aqoxy4G00641 Aquilegia oxysepala HOM05D007507 ORTHO05D009420 6.4e-12 74.3 98 50.0
Hma1.2p1_0558F.1_g178550 Hydrangea macrophylla HOM05D007507 ORTHO05D009420 1.1e-11 73.6 55 72.7
Eucgr.E03247 Eucalyptus grandis HOM05D007507 ORTHO05D009420 1.4e-11 73.2 79 57.0
SalBow8G4682 Salvia bowleyana HOM05D007507 ORTHO05D009420 1.4e-11 73.2 71 57.7
Atru.chr10.1803 Acer truncatum HOM05D007507 ORTHO05D009420 1.9e-11 72.8 88 48.9
PSO675G6999 Papaver somniferum HOM05D007507 ORTHO05D009420 1.9e-11 72.8 78 50.0
TPR.G19926 Trifolium pratense HOM05D007507 ORTHO05D009420 1.9e-11 72.8 73 60.3
SEGI_17757 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 2.4e-11 72.4 76 52.6
Manes.16G031300 Manihot esculenta HOM05D007507 ORTHO05D009420 7.1e-11 70.9 80 55.0
arahy.Tifrunner.gnm1.ann1.26E61A Arachis hypogaea HOM05D007507 ORTHO05D009420 9.3e-11 70.5 66 65.2
arahy.Tifrunner.gnm1.ann1.XNU6AG Arachis hypogaea HOM05D007507 ORTHO05D009420 9.3e-11 70.5 66 65.2
PGR042G2392 Punica granatum HOM05D007507 ORTHO05D009420 9.3e-11 70.5 91 48.4
Migut.M01111 Erythranthe guttata HOM05D007507 ORTHO05D009420 4.6e-10 68.2 78 52.6
CsaV3_6G050370 Cucumis sativus L. HOM05D007507 ORTHO05D009420 6.0e-10 67.8 81 54.3
SalBow8G0489 Salvia bowleyana HOM05D007507 ORTHO05D009420 7.8e-10 67.4 68 57.4
SEGI_36970 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 1.1e-08 63.5 67 53.7
Sed0011593 Sechium edule HOM05D007507 ORTHO05D009420 3.3e-08 62.0 63 60.3
Oeu027697.1 Olea europaea HOM05D007507 ORTHO05D009420 5.6e-08 61.2 59 61.0
Nitab4.5_0002813g0060 Nicotiana tabacum HOM05D007507 ORTHO05D009420 9.6e-08 60.5 40 80.0
SalBow8G0028 Salvia bowleyana HOM05D002091 ORTHO05D002140 1.6e-07 59.7 75 49.3
Nitab4.5_0007893g0030 Nicotiana tabacum HOM05D007507 ORTHO05D009420 2.1e-07 59.3 36 88.9
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 3.6e-07 58.5 77 44.2
MELO3C007264.2 Cucumis melo HOM05D007507 ORTHO05D009420 1.4e-06 56.6 39 76.9
Oeu015676.1 Olea europaea HOM05D007507 ORTHO05D009420 1.4e-06 56.6 59 62.7
SEGI_35508 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 1.4e-06 56.6 66 48.5
Haze_06387 Corylus avellana HOM05D007507 ORTHO05D009420 1.8e-06 56.2 58 53.4
PSO384G3887 Papaver somniferum HOM05D003527 ORTHO05D004099 3.1e-06 55.5 73 43.8
Hma1.2p1_1513F.1_g288070 Hydrangea macrophylla HOM05D003527 ORTHO05D004099 4.0e-06 55.1 69 47.8
TWI79G0031 Tripterygium wilfordii HOM05D003527 ORTHO05D004099 5.3e-06 54.7 61 49.2
Potri.006G084400 Populus trichocarpa HOM05D003527 ORTHO05D004099 6.9e-06 54.3 78 43.6


User provided reference genes

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