Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G3195 Erigeron canadensis HOM05D004118 ORTHO05D004686 0.0e+00 1223.0 649 100.0
Lsat_1_v5_gn_7_103661 Lactuca sativa HOM05D004118 ORTHO05D004686 6.3e-123 445.7 718 46.2
Lsat_1_v5_gn_9_98421 Lactuca sativa HOM05D004118 ORTHO05D004686 1.4e-119 434.5 708 45.6
HanXRQChr03g0070941 Helianthus annuus HOM05D004118 ORTHO05D004686 4.5e-113 412.9 685 44.5
Nitab4.5_0000246g0070 Nicotiana tabacum HOM05D004118 ORTHO05D004686 8.8e-109 398.7 731 42.3
Nitab4.5_0011677g0020 Nicotiana tabacum HOM05D004118 ORTHO05D004686 3.3e-108 396.7 739 41.8
Lsat_1_v5_gn_5_128820 Lactuca sativa HOM05D004118 ORTHO05D004686 2.2e-104 384.0 682 42.7
Solyc07g062730.1 Solanum lycopersicum HOM05D004118 ORTHO05D004686 1.2e-102 378.3 721 41.6
ECA240G2123 Erigeron canadensis HOM05D004118 ORTHO05D004686 1.6e-102 377.9 703 41.3
PGSC0003DMG400012399 Solanum tuberosum HOM05D004118 ORTHO05D004686 2.3e-101 374.0 725 41.1
Sopen07g030960 Solanum pennellii HOM05D004118 ORTHO05D004686 1.5e-100 371.3 723 42.2
CAN.G162.27 Capsicum annuum HOM05D004118 ORTHO05D004686 5.7e-100 369.4 714 41.5
Prupe.4G173200 Prunus persica HOM05D004118 ORTHO05D004686 2.6e-97 360.5 740 39.7
ECA234G1224 Erigeron canadensis HOM05D004118 ORTHO05D004686 9.4e-95 352.1 715 39.2
QL08p023555 Quercus lobata HOM05D004118 ORTHO05D004686 4.7e-94 349.7 744 38.7
Manes.15G090200 Manihot esculenta HOM05D004118 ORTHO05D004686 6.1e-94 349.4 725 39.0
MD11G1256900 Malus domestica HOM05D004118 ORTHO05D004686 1.4e-93 348.2 748 38.6
HanXRQChr10g0302481 Helianthus annuus HOM05D004118 ORTHO05D004686 6.7e-93 345.9 734 39.2
DCAR_021002 Daucus carota HOM05D004118 ORTHO05D004686 2.0e-92 344.4 740 38.2
FvH4_3g19150 Fragaria vesca HOM05D004118 ORTHO05D004686 3.3e-92 343.6 768 37.9
HanXRQChr15g0494281 Helianthus annuus HOM05D004118 ORTHO05D004686 9.7e-92 342.0 787 40.5
SalBow8G5405 Salvia bowleyana HOM05D004118 ORTHO05D004686 3.7e-91 340.1 713 39.0
MSTRG.6813 Avicennia marina HOM05D004118 ORTHO05D004686 6.3e-91 339.3 753 38.4
CiPaw.11G166400 Carya illinoinensis HOM05D004118 ORTHO05D004686 1.8e-90 337.8 761 38.0
Thecc.07G100000 Theobroma cacao HOM05D004118 ORTHO05D004686 5.3e-90 336.3 767 38.9
FAN11G3070 Fragaria x ananassa HOM05D004118 ORTHO05D004686 7.0e-90 335.9 761 37.2
MD03G1236100 Malus domestica HOM05D004118 ORTHO05D004686 2.7e-89 334.0 733 38.3
PGSC0003DMG400015371 Solanum tuberosum HOM05D004118 ORTHO05D004686 7.7e-89 332.4 708 40.8
FAN25G0990 Fragaria x ananassa HOM05D004118 ORTHO05D004686 2.2e-88 330.9 757 37.3
CSS0010936 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 2.9e-88 330.5 724 38.5
FAN21G0508 Fragaria x ananassa HOM05D004118 ORTHO05D004686 2.9e-88 330.5 760 36.8
Manes.03G104700 Manihot esculenta HOM05D004118 ORTHO05D004686 6.5e-88 329.3 732 38.3
TWI39G0897 Tripterygium wilfordii HOM05D004118 ORTHO05D004686 7.2e-87 325.9 716 37.4
Cpa.g.sc80.12 Carica papaya HOM05D004118 ORTHO05D004686 9.4e-87 325.5 790 36.2
Sopen12g005780 Solanum pennellii HOM05D004118 ORTHO05D004686 3.6e-86 323.6 702 41.0
Cc05_g11580 Coffea canephora HOM05D004118 ORTHO05D004686 4.7e-86 323.2 821 36.1
FAN16G2866 Fragaria x ananassa HOM05D004118 ORTHO05D004686 1.4e-85 321.6 755 36.4
Peaxi162Scf00000g00285 Petunia axillaris HOM05D004118 ORTHO05D004686 1.4e-85 321.6 673 40.1
MSTRG.15246 Avicennia marina HOM05D004118 ORTHO05D004686 1.8e-85 321.2 725 38.5
Sabra11G0090500 Salix brachista HOM05D004118 ORTHO05D004686 3.0e-85 320.5 753 37.5
Sabra11G0091500 Salix brachista HOM05D004118 ORTHO05D004686 1.2e-84 318.5 754 36.9
Potri.011G097700 Populus trichocarpa HOM05D004118 ORTHO05D004686 2.0e-84 317.8 772 35.6
PGR083G2344 Punica granatum HOM05D004118 ORTHO05D004686 2.6e-84 317.4 718 37.7
Lj8C153G19 Lonicera japonica HOM05D004118 ORTHO05D004686 3.4e-84 317.0 671 39.5
Nn1g04275 Nelumbo nucifera HOM05D004118 ORTHO05D004686 4.4e-84 316.6 721 38.4
Duzib213G0890 Durio zibethinus HOM05D004118 ORTHO05D004686 5.7e-84 316.2 732 37.8
Haze_09381 Corylus avellana HOM05D004118 ORTHO05D004686 7.5e-84 315.8 732 37.6
Cfa020624 Carpinus fangiana HOM05D004118 ORTHO05D004686 9.8e-84 315.5 736 38.3
SGA_v2.0_scaffold73G24222 Striga asiatica HOM05D004118 ORTHO05D004686 1.7e-83 314.7 775 36.5
CsaV3_3G019580 Cucumis sativus L. HOM05D004118 ORTHO05D004686 2.8e-83 313.9 796 34.2
RcHm_v2.0_Chr5g0032241 Rosa chinensis HOM05D004118 ORTHO05D004686 6.3e-83 312.8 764 35.1
MSTRG.12889 Avicennia marina HOM05D004118 ORTHO05D004686 8.3e-83 312.4 734 37.5
Gohir.D13G152264 Gossypium hirsutum HOM05D004118 ORTHO05D004686 8.3e-83 312.4 752 39.1
Oeu019296.1 Olea europaea HOM05D004118 ORTHO05D004686 1.8e-82 311.2 715 36.1
Sed0017211 Sechium edule HOM05D004118 ORTHO05D004686 2.4e-82 310.8 738 37.9
Eucgr.F01179 Eucalyptus grandis HOM05D004118 ORTHO05D004686 3.1e-82 310.5 769 36.0
Sc16g0007320 Simmondsia chinensis HOM05D004118 ORTHO05D004686 2.7e-81 307.4 753 36.7
Peaxi162Scf00069g00197 Petunia axillaris HOM05D004118 ORTHO05D004686 3.5e-81 307.0 676 37.4
Medtr2g078530 Medicago truncatula HOM05D004118 ORTHO05D004686 4.5e-81 306.6 722 38.2
CSS0009782 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 5.0e-80 303.1 705 36.6
CiPaw.12G116800 Carya illinoinensis HOM05D004118 ORTHO05D004686 6.5e-80 302.8 733 36.3
Gohir.A13G147400 Gossypium hirsutum HOM05D004118 ORTHO05D004686 8.5e-80 302.4 723 38.3
TAR627G0391 Trochodendron aralioides HOM05D004118 ORTHO05D004686 1.5e-79 301.6 715 36.5
Migut.M00768 Erythranthe guttata HOM05D004118 ORTHO05D004686 9.5e-79 298.9 770 35.7
Potri.001G373100 Populus trichocarpa HOM05D004118 ORTHO05D004686 9.5e-79 298.9 740 36.1
Nitab4.5_0000332g0190 Nicotiana tabacum HOM05D004118 ORTHO05D004686 2.1e-78 297.7 703 38.5
VMungo1080G0043 Vigna mungo HOM05D004118 ORTHO05D004686 2.1e-78 297.7 737 37.4
Ciclev10007570m.g Citrus clementina HOM05D004118 ORTHO05D004686 1.0e-77 295.4 731 35.7
Dinv20215 Davidia involucrata HOM05D004118 ORTHO05D004686 4.0e-77 293.5 665 37.3
Aqoxy1G02262 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 8.8e-77 292.4 721 37.7
Glyma.13G273000 Glycine max HOM05D004118 ORTHO05D004686 2.6e-76 290.8 761 36.1
Sp3g13300 Schrenkiella parvula HOM05D004118 ORTHO05D004686 4.4e-76 290.0 678 37.5
MELO3C019394.2 Cucumis melo HOM05D004118 ORTHO05D004686 1.3e-75 288.5 787 34.6
Psat5g241400 Pisum sativum HOM05D004118 ORTHO05D004686 2.8e-75 287.3 743 37.1
Gorai.013G171900 Gossypium raimondii HOM05D004118 ORTHO05D004686 4.9e-75 286.6 720 37.4
Actinidia35234 Actinidia chinensis HOM05D004118 ORTHO05D001556 6.3e-75 286.2 688 37.2
Nitab4.5_0003033g0050 Nicotiana tabacum HOM05D004118 ORTHO05D004686 1.1e-74 285.4 701 37.4
Phvul.005G069300 Phaseolus vulgaris HOM05D004118 ORTHO05D004686 1.8e-74 284.6 745 36.8
vmacro11898 Vaccinium macrocarpon HOM05D004118 ORTHO05D004686 4.1e-74 283.5 711 35.7
Rhsim04G0023200 Rhododendron simsii HOM05D004118 ORTHO05D004686 4.5e-73 280.0 723 35.3
Sabra16G0245500 Salix brachista HOM05D004118 ORTHO05D004686 4.5e-73 280.0 712 35.0
Actinidia07500 Actinidia chinensis HOM05D004118 ORTHO05D004686 6.6e-72 276.2 670 38.5
CSS0030924 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 8.6e-72 275.8 661 37.1
TWI38G2280 Tripterygium wilfordii HOM05D004118 ORTHO05D004686 1.5e-71 275.0 693 34.8
Dinv14950 Davidia involucrata HOM05D004118 ORTHO05D004686 2.5e-71 274.2 626 37.7
Aa31LG8G2310 Aethionema arabicum HOM05D004118 ORTHO05D004686 3.3e-71 273.9 674 35.3
Gohir.D01G046700 Gossypium hirsutum HOM05D004118 ORTHO05D004686 6.1e-70 269.6 669 36.0
Ah.06g194460 Amaranthus hybridus HOM05D004118 ORTHO05D004686 8.0e-70 269.2 674 35.9
Thhalv10020211m.g Eutrema salsugineum HOM05D004118 ORTHO05D004686 8.0e-70 269.2 676 35.5
THA.LOC104810455 Tarenaya hassleriana HOM05D004118 ORTHO05D004686 6.8e-69 266.2 674 36.4
CANSAT35G0858 Cannabis sativa HOM05D004118 ORTHO05D004686 5.7e-68 263.1 732 35.0
unitig_37.g12565 Utricularia gibba HOM05D004118 ORTHO05D004686 9.8e-68 262.3 680 35.9
Lalb_Chr25g0286181 Lupinus albus HOM05D004118 ORTHO05D004686 1.3e-67 261.9 711 36.3
Lalb_Chr20g0109451 Lupinus albus HOM05D004118 ORTHO05D004686 3.7e-67 260.4 707 36.2
Sed0016267 Sechium edule HOM05D004118 ORTHO05D004686 4.9e-67 260.0 640 36.2
arahy.Tifrunner.gnm1.ann1.YMW7LF Arachis hypogaea HOM05D004118 ORTHO05D004686 8.3e-67 259.2 683 34.4
Duzib170G0047 Durio zibethinus HOM05D004118 ORTHO05D004686 1.4e-66 258.5 700 37.4
Rhsim06G0203400 Rhododendron simsii HOM05D004118 ORTHO05D004686 1.6e-65 255.0 735 35.2
PSO675G0887 Papaver somniferum HOM05D004118 ORTHO05D004686 2.7e-65 254.2 739 33.6
Lj3g0023579 Lotus japonicus HOM05D004118 ORTHO05D004686 7.8e-65 252.7 743 34.1
Gorai.002G066200 Gossypium raimondii HOM05D004118 ORTHO05D004686 5.0e-64 250.0 575 37.2
Oeu025351.1 Olea europaea HOM05D004118 ORTHO05D004686 5.0e-64 250.0 674 34.7
BcaB04g20948 Brassica carinata HOM05D004118 ORTHO05D004686 1.5e-63 248.4 638 34.2
PSO478G3864 Papaver somniferum HOM05D004118 ORTHO05D004686 3.6e-62 243.8 734 32.0
EL10Ac4g08266 Beta vulgaris HOM05D004118 ORTHO05D004686 6.2e-62 243.0 752 33.1
Lalb_Chr01g0006651 Lupinus albus HOM05D004118 ORTHO05D004686 1.8e-61 241.5 682 33.4
AL3G27450 Arabidopsis lyrata HOM05D004118 ORTHO05D004686 1.5e-60 238.4 707 33.5
Hma1.2p1_0313F.1_g121640 Hydrangea macrophylla HOM05D004118 ORTHO05D004686 5.8e-60 236.5 643 34.8
DCAR_019575 Daucus carota HOM05D004118 ORTHO05D004686 4.9e-59 233.4 605 35.2
Glyma.12G227300 Glycine max HOM05D004118 ORTHO05D004686 4.9e-59 233.4 738 33.3
PSO541G0755 Papaver somniferum HOM05D004118 ORTHO05D004686 1.4e-58 231.9 754 31.2
PSO017G1325 Papaver somniferum HOM05D004118 ORTHO05D004686 2.4e-58 231.1 774 30.9
unitig_747.g21581 Utricularia gibba HOM05D004118 ORTHO05D004686 5.4e-58 229.9 738 32.0
TPR.G17554 Trifolium pratense HOM05D004118 ORTHO05D004686 1.6e-57 228.4 733 33.4
CARHR090060 Cardamine hirsuta HOM05D004118 ORTHO05D004686 1.1e-55 222.2 630 33.7
AUR62036141 Chenopodium quinoa HOM05D004118 ORTHO05D004686 9.5e-55 219.2 733 31.9
MBI07_g32544_MAGBIO Magnolia biondii HOM05D004118 ORTHO05D004686 1.6e-54 218.4 744 30.5
ATR0602G295 Amborella trichopoda HOM05D004118 ORTHO05D004686 2.8e-54 217.6 714 31.1
Aqoxy4G00578 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 1.1e-53 215.7 715 32.9
SGA_v2.0_scaffold70G23697 Striga asiatica HOM05D004118 ORTHO05D004686 1.2e-52 212.2 668 33.5
Ah.04g162010 Amaranthus hybridus HOM05D004118 ORTHO05D004686 1.7e-51 208.4 726 31.5
arahy.Tifrunner.gnm1.ann1.82B0EJ Arachis hypogaea HOM05D004118 ORTHO05D004686 1.4e-50 205.3 586 32.6
DCAR_017117 Daucus carota HOM05D004118 ORTHO05D004686 1.9e-47 194.9 672 33.3
C01p49420 Brassica napus HOM05D004118 ORTHO05D004686 9.5e-47 192.6 606 33.3
Gohir.A08G021600 Gossypium hirsutum HOM05D004118 ORTHO05D004686 1.6e-46 191.8 619 32.5
Lalb_Chr03g0030811 Lupinus albus HOM05D004118 ORTHO05D004686 1.1e-45 189.1 672 29.8
BolC1t04899H Brassica oleracea HOM05D004118 ORTHO05D004686 3.1e-45 187.6 606 32.8
BcaC09g48474 Brassica carinata HOM05D004118 ORTHO05D004686 4.0e-45 187.2 605 32.7
Gohir.D08G032400 Gossypium hirsutum HOM05D004118 ORTHO05D004686 5.8e-44 183.3 617 32.3
Lsat_1_v5_gn_4_172920 Lactuca sativa HOM05D004118 ORTHO05D004686 8.4e-43 179.5 218 53.7
C05p52120 Brassica napus HOM05D004118 ORTHO05D004686 1.4e-42 178.7 669 31.1
BolC5t33897H Brassica oleracea HOM05D004118 ORTHO05D004686 1.4e-42 178.7 669 31.1
Gorai.004G029800 Gossypium raimondii HOM05D004118 ORTHO05D004686 2.4e-42 177.9 617 31.6
Zm00001eb014970 Zea mays HOM05D004118 ORTHO05D004686 5.4e-42 176.8 822 29.3
Zm00001eb395950 Zea mays HOM05D004118 ORTHO05D004686 9.2e-42 176.0 821 28.4
BcaB06g29535 Brassica carinata HOM05D004118 ORTHO05D004686 3.5e-41 174.1 672 29.5
A05p34340 Brassica napus HOM05D004118 ORTHO05D004686 1.3e-40 172.2 674 30.7
SGA_v2.0_scaffold130G34343 Striga asiatica HOM05D004118 ORTHO05D004686 8.6e-40 169.5 631 32.3
Lalb_Chr19g0134031 Lupinus albus HOM05D004118 ORTHO05D004686 7.3e-39 166.4 643 28.8
HPP92_003871 Vanilla planifolia HOM05D004118 ORTHO05D004686 1.1e-37 162.5 716 28.5
HPP92_002942 Vanilla planifolia HOM05D004118 ORTHO05D004686 4.0e-37 160.6 712 28.9
BraA05t22255Z Brassica rapa HOM05D004118 ORTHO05D004686 4.4e-36 157.1 675 28.4
Os06g0352900 Oryza sativa ssp. japonica HOM05D004118 ORTHO05D004686 9.9e-36 156.0 830 27.6
SEGI_08873 Sequoiadendron giganteum HOM05D004118 ORTHO05D004686 3.8e-35 154.1 685 30.2
Solyc12g014040.1 Solanum lycopersicum HOM05D004118 ORTHO05D004686 3.8e-35 154.1 233 47.6
Gohir.A01G060200 Gossypium hirsutum HOM05D004118 ORTHO05D004686 1.9e-34 151.8 456 32.2
HanXRQChr12g0372791 Helianthus annuus HOM05D004118 ORTHO05D004686 7.8e-33 146.4 203 46.3
Lsat_1_v5_gn_1_36460 Lactuca sativa HOM05D004118 ORTHO05D004686 3.9e-32 144.1 248 44.8
THA.LOC104798758 Tarenaya hassleriana HOM05D004118 ORTHO05D004686 3.9e-32 144.1 495 31.3
Actinidia14383 Actinidia chinensis HOM05D004118 ORTHO05D004686 4.3e-31 140.6 307 37.8
GSVIVG01014262001 Vitis vinifera HOM05D004118 ORTHO05D003395 2.1e-30 138.3 496 32.3
CAN.G329.5 Capsicum annuum HOM05D004118 ORTHO05D004686 1.1e-29 136.0 239 41.0
PSO675G3813 Papaver somniferum HOM05D004118 ORTHO05D004686 3.4e-28 131.0 309 35.3
HPP92_003895 Vanilla planifolia HOM05D004118 ORTHO05D004686 3.4e-28 131.0 332 33.1
Atru.chr2.2380 Acer truncatum HOM05D004118 ORTHO05D004686 2.4e-26 124.8 189 39.7
AT3G15095 Arabidopsis thaliana HOM05D004118 ORTHO05D004686 5.4e-26 123.6 432 30.3
Nn1g06377 Nelumbo nucifera HOM05D004118 ORTHO05D004686 2.1e-22 111.7 269 35.7
Cc04_g12070 Coffea canephora HOM05D004118 ORTHO05D004686 4.8e-22 110.5 141 50.4
Atru.chr2.2381 Acer truncatum HOM05D004118 ORTHO05D004686 6.9e-21 106.7 164 45.1
AUR62019494 Chenopodium quinoa HOM05D004118 ORTHO05D004686 2.6e-20 104.8 487 29.6
CDE10G0292 Ceratophyllum demersum HOM05D004118 ORTHO05D004686 1.9e-18 98.6 639 27.4
Lj1P837T15 Lonicera japonica HOM05D004118 ORTHO05D004686 7.1e-18 96.7 119 57.1
Cfa006262 Carpinus fangiana HOM05D000001 ORTHO05D000003 1.1e-15 89.4 107 43.0
HPP92_003896 Vanilla planifolia HOM05D004118 ORTHO05D004686 9.6e-15 86.3 179 34.6
CDE10G0599 Ceratophyllum demersum HOM05D004118 ORTHO05D004686 3.7e-14 84.3 235 31.1
SEGI_02629 Sequoiadendron giganteum HOM05D004118 ORTHO05D004686 9.0e-13 79.7 378 26.2
Lsat_1_v5_gn_5_162921 Lactuca sativa HOM05D004118 ORTHO05D004686 1.5e-12 79.0 78 61.5
Actinidia33372 Actinidia chinensis HOM05D004118 ORTHO05D004686 1.3e-11 75.9 201 35.3
ECA246G1087 Erigeron canadensis HOM05D003923 ORTHO05D004553 6.7e-08 63.5 238 23.1
Nn2g10698 Nelumbo nucifera HOM05D004499 ORTHO05D004928 2.5e-07 61.6 281 27.8
Aqoxy6G00599 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 3.3e-07 61.2 225 28.4
ClCG10G020450 Citrullus lanatus HOM05D004499 ORTHO05D004928 3.7e-06 57.8 284 26.4
Zm00001eb098670 Zea mays HOM05D003923 ORTHO05D004553 3.7e-06 57.8 248 23.0
COL.COLO4_16427 Corchorus olitorius HOM05D003923 ORTHO05D004553 4.8e-06 57.4 269 26.8
Hma1.2p1_0350F.1_g132810 Hydrangea macrophylla HOM05D004499 ORTHO05D004928 4.8e-06 57.4 369 26.3
TPR.G17527 Trifolium pratense HOM05D004118 ORTHO05D004686 4.8e-06 57.4 51 62.7
QL12p036407 Quercus lobata HOM05D003923 ORTHO05D004553 6.3e-06 57.0 278 26.3
PSO063G6372 Papaver somniferum HOM05D004499 ORTHO05D004928 8.2e-06 56.6 280 25.7


User provided reference genes

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